Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MAK16 Sequence: fasta or formatted (300aa) NCBI GI: 31543091
Description:

MAK16 homolog

Referenced in:

RNA-binding Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         18           2
 C cysteine            2.0          6           1
 D aspartate           9.0         27           6
 E glutamate          12.7         38           5
 F phenylalanine       3.3         10           1
 G glycine             3.0          9           1
 H histidine           1.0          3           1
 I isoleucine          5.3         16           1
 K lysine             10.7         32           2
 L leucine             8.0         24           2
 M methionine          1.3          4           1
 N asparagine          2.7          8           1
 P proline             2.7          8           1
 Q glutamine           5.3         16           2
 R arginine            8.0         24           2
 S serine              6.7         20           3
 T threonine           4.3         13           2
 V valine              3.3         10           1
 W tryptophan          1.0          3           1
 Y tyrosine            3.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAK16 homolog 
EHMT1                 0.050   euchromatic histone-lysine N-methyltransferase 1 is...
EHMT1                 0.050   euchromatic histone-lysine N-methyltransferase 1 is...
ANP32B                0.050   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
RBM25                 0.045   RNA binding motif protein 25 
NCL                   0.043   nucleolin 
DAXX                  0.043   death-domain associated protein isoform a 
DAXX                  0.043   death-domain associated protein isoform a 
DAXX                  0.043   death-domain associated protein isoform b 
MYT1L                 0.042   myelin transcription factor 1-like 
LOC647020             0.038   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.038   PREDICTED: similar to acidic (leucine-rich) nuclear...
PELP1                 0.038   proline, glutamic acid and leucine rich protein 1 [...
SETD1A                0.038   SET domain containing 1A 
POLA1                 0.038   DNA-directed DNA polymerase alpha 1 
ATAD2                 0.038   ATPase family, AAA domain containing 2 
ZRANB2                0.036   zinc finger protein 265 isoform 1 
ZRANB2                0.036   zinc finger protein 265 isoform 2 
MTERFD2               0.036   MTERF domain containing 2 
UBTF                  0.036   upstream binding transcription factor, RNA polymera...
UBTF                  0.036   upstream binding transcription factor, RNA polymera...
UBTF                  0.036   upstream binding transcription factor, RNA polymerase...
MAP1A                 0.035   microtubule-associated protein 1A 
WDR87                 0.035   NYD-SP11 protein 
ANP32E                0.035   acidic (leucine-rich) nuclear phosphoprotein 32 fam...
BAZ2B                 0.035   bromodomain adjacent to zinc finger domain, 2B [Homo...
HTATSF1               0.035   HIV-1 Tat specific factor 1 
HTATSF1               0.035   HIV-1 Tat specific factor 1 
POLR3G                0.035   polymerase (RNA) III (DNA directed) polypeptide G (...
NEFM                  0.033   neurofilament, medium polypeptide 150kDa isoform 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press