Guide to the Human Genome
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Name: WDR75 Sequence: fasta or formatted (830aa) NCBI GI: 29789283
Description:

WD repeat domain 75

Referenced in:

Nucleus and Nucleolus
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         43           2
 C cysteine            3.1         26           2
 D aspartate           5.1         42           2
 E glutamate           8.1         67           3
 F phenylalanine       5.3         44           2
 G glycine             4.7         39           2
 H histidine           2.7         22           2
 I isoleucine          6.0         50           4
 K lysine              7.3         61           3
 L leucine            10.2         85           3
 M methionine          1.3         11           1
 N asparagine          4.6         38           2
 P proline             3.3         27           1
 Q glutamine           4.0         33           3
 R arginine            3.4         28           2
 S serine              8.4         70           3
 T threonine           6.1         51           2
 V valine              6.3         52           2
 W tryptophan          1.8         15           1
 Y tyrosine            3.1         26           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WD repeat domain 75 
NLE1                  0.019   Notchless gene homolog isoform a 
WDR3                  0.016   WD repeat-containing protein 3 
TBL3                  0.014   transducin beta-like 3 
TAF5L                 0.014   PCAF associated factor 65 beta isoform a 
PAFAH1B1              0.014   platelet-activating factor acetylhydrolase, isoform I...
COPB2                 0.014   coatomer protein complex, subunit beta 2 (beta prime)...
APAF1                 0.013   apoptotic peptidase activating factor 1 isoform d [H...
APAF1                 0.013   apoptotic peptidase activating factor 1 isoform c [H...
APAF1                 0.013   apoptotic peptidase activating factor 1 isoform b [Ho...
APAF1                 0.013   apoptotic peptidase activating factor 1 isoform a [Ho...
FBXW7                 0.013   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.013   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.013   F-box and WD repeat domain containing 7 isoform 2 [H...
KATNB1                0.013   katanin p80 subunit B 1 
TEP1                  0.012   telomerase-associated protein 1 
WDR5                  0.012   WD repeat domain 5 
WDR5                  0.012   WD repeat domain 5 
TBL1XR1               0.012   transducin (beta)-like 1 X-linked receptor 1 
PHIP                  0.011   pleckstrin homology domain interacting protein [Homo...
PAK1IP1               0.011   PAK1 interacting protein 1 
WDR51A                0.011   WD repeat domain 51A isoform 2 
WDR51A                0.011   WD repeat domain 51A isoform 1 
WDR5B                 0.011   WD repeat domain 5B 
FBXW11                0.011   F-box and WD repeat domain containing 11 isoform C [...
TBL1X                 0.011   transducin beta-like 1X isoform b 
TBL1X                 0.011   transducin beta-like 1X isoform b 
TBL1X                 0.011   transducin beta-like 1X isoform a 
TBL1X                 0.011   transducin beta-like 1X isoform a 
FBXW11                0.011   F-box and WD repeat domain containing 11 isoform A [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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