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Search of human proteins with 29789072
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens]
(903 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens] 1838 0.0
gi|148227842 Myb-like, SWIRM and MPN domains 1 [Homo sapiens] 52 2e-06
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 49 3e-05
gi|94538370 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ... 44 9e-04
gi|193788632 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform... 44 9e-04
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 42 0.003
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 40 0.007
gi|18034775 PHD finger protein 20 [Homo sapiens] 40 0.013
gi|30348954 mindbomb homolog 1 [Homo sapiens] 39 0.017
gi|55741473 HECT, C2 and WW domain containing E3 ubiquitin prote... 39 0.017
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 39 0.022
gi|210032580 SET domain containing 1B [Homo sapiens] 39 0.022
gi|126032348 hect domain and RLD 2 [Homo sapiens] 39 0.028
gi|21361912 DnaJ (Hsp40) homolog, subfamily C, member 1 [Homo sa... 39 0.028
gi|117676384 splicing factor, arginine/serine-rich 2, interactin... 38 0.037
gi|62821787 COBL-like 1 [Homo sapiens] 38 0.037
gi|56606114 trichohyalin-like 1 [Homo sapiens] 38 0.049
gi|225543215 antigen identified by monoclonal antibody Ki-67 iso... 37 0.083
gi|103472005 antigen identified by monoclonal antibody Ki-67 iso... 37 0.083
gi|238624188 diffuse panbronchiolitis critical region 1 protein ... 37 0.11
gi|239740773 PREDICTED: similar to diffuse panbronchiolitis crit... 37 0.11
gi|62988328 ankyrin repeat domain 50 [Homo sapiens] 37 0.11
gi|109659847 filamin A interacting protein 1-like isoform 3 [Hom... 36 0.14
gi|109659845 filamin A interacting protein 1-like isoform 1 [Hom... 36 0.14
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 35 0.24
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 35 0.24
gi|47419936 SFRS protein kinase 1 [Homo sapiens] 35 0.24
gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens] 35 0.32
gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform... 35 0.41
gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform... 35 0.41
>gi|29789072 zinc finger, ZZ-type containing 3 [Homo sapiens]
Length = 903
Score = 1838 bits (4762), Expect = 0.0
Identities = 903/903 (100%), Positives = 903/903 (100%)
Query: 1 MAASRSTRVTRSTVGLNGLDESFCGRTLRNRSIAHPEEISSNSQVRSRSPKKRPEPVPIQ 60
MAASRSTRVTRSTVGLNGLDESFCGRTLRNRSIAHPEEISSNSQVRSRSPKKRPEPVPIQ
Sbjct: 1 MAASRSTRVTRSTVGLNGLDESFCGRTLRNRSIAHPEEISSNSQVRSRSPKKRPEPVPIQ 60
Query: 61 KGNNNGRTTDLKQQSTRESWVSPRKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIK 120
KGNNNGRTTDLKQQSTRESWVSPRKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIK
Sbjct: 61 KGNNNGRTTDLKQQSTRESWVSPRKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIK 120
Query: 121 RCLRSEAPNSSEEDSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLILDDCEKREIKKV 180
RCLRSEAPNSSEEDSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLILDDCEKREIKKV
Sbjct: 121 RCLRSEAPNSSEEDSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLILDDCEKREIKKV 180
Query: 181 NVSEEGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVA 240
NVSEEGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVA
Sbjct: 181 NVSEEGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVA 240
Query: 241 ENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPA 300
ENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPA
Sbjct: 241 ENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPA 300
Query: 301 TGPFSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPVLDC 360
TGPFSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPVLDC
Sbjct: 301 TGPFSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPVLDC 360
Query: 361 VSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNATVS 420
VSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNATVS
Sbjct: 361 VSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNATVS 420
Query: 421 DNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQHITEE 480
DNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQHITEE
Sbjct: 421 DNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQHITEE 480
Query: 481 EDDDPDVYYFESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIG 540
EDDDPDVYYFESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIG
Sbjct: 481 EDDDPDVYYFESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIG 540
Query: 541 FVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFEREFKNRKRHTRRVKLVFDKVGL 600
FVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFEREFKNRKRHTRRVKLVFDKVGL
Sbjct: 541 FVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFEREFKNRKRHTRRVKLVFDKVGL 600
Query: 601 PARPKSPLDPKKDGESLSYSMLPLSDGPEGSSSRPQMIRGRLCDDTKPETFNQLWTVEEQ 660
PARPKSPLDPKKDGESLSYSMLPLSDGPEGSSSRPQMIRGRLCDDTKPETFNQLWTVEEQ
Sbjct: 601 PARPKSPLDPKKDGESLSYSMLPLSDGPEGSSSRPQMIRGRLCDDTKPETFNQLWTVEEQ 660
Query: 661 KKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKAGIPVPGRTPNL 720
KKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKAGIPVPGRTPNL
Sbjct: 661 KKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKAGIPVPGRTPNL 720
Query: 721 YIYSKKSSTSRRQHPLNKHLFKPSTFMTSHEPPVYMDEDDDRSCFHSHMNTAVEDASDDE 780
YIYSKKSSTSRRQHPLNKHLFKPSTFMTSHEPPVYMDEDDDRSCFHSHMNTAVEDASDDE
Sbjct: 721 YIYSKKSSTSRRQHPLNKHLFKPSTFMTSHEPPVYMDEDDDRSCFHSHMNTAVEDASDDE 780
Query: 781 SIPIMYRNLPEYKELLQFKKLKKQKLQQMQAESGFVQHVGFKCDNCGIEPIQGVRWHCQD 840
SIPIMYRNLPEYKELLQFKKLKKQKLQQMQAESGFVQHVGFKCDNCGIEPIQGVRWHCQD
Sbjct: 781 SIPIMYRNLPEYKELLQFKKLKKQKLQQMQAESGFVQHVGFKCDNCGIEPIQGVRWHCQD 840
Query: 841 CPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYRSETFLDRDYCVSQGTSYNYLDPNYFP 900
CPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYRSETFLDRDYCVSQGTSYNYLDPNYFP
Sbjct: 841 CPPEMSLDFCDSCSDCLHETDIHKEDHQLEPIYRSETFLDRDYCVSQGTSYNYLDPNYFP 900
Query: 901 ANR 903
ANR
Sbjct: 901 ANR 903
>gi|148227842 Myb-like, SWIRM and MPN domains 1 [Homo sapiens]
Length = 828
Score = 52.4 bits (124), Expect = 2e-06
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 8/74 (10%)
Query: 646 TKPETFNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIK 705
TKP +++ WT+EE++ EQ L K+ RRW KI+ +G+RT QV S ++YF
Sbjct: 112 TKPASYSVKWTIEEKELFEQGLAKF------GRRWTKISKLIGSRTVLQVKSYARQYFKN 165
Query: 706 LTKAGIPVPGRTPN 719
K G+ TPN
Sbjct: 166 KVKCGL--DKETPN 177
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 48.5 bits (114), Expect = 3e-05
Identities = 68/323 (21%), Positives = 121/323 (37%), Gaps = 31/323 (9%)
Query: 37 EEISSNSQVRSRSPKKRPEPVPIQKGNNNG-----RTTDLKQQSTRESWVS-PRKRGLSS 90
EE + + + S K + E P+ N + TT K++ + V P L
Sbjct: 238 EEETPKQEEQKESEKMKSEEQPMDLENRSTANVLEETTVKKEKEDEKELVKLPVIVKLEK 297
Query: 91 SEKDNIERQAIENCERRQTEPVSPVLKRIKRCLRSEAPNSSEEDSPIKSDKESVEQRSTV 150
+N E++ I+ E V P+ +K C S + P+ + E +E +
Sbjct: 298 PLPENEEKKIIKEESDSFKENVKPIKVEVKECRADPKDTKSSMEKPVAQEPERIEFGGNI 357
Query: 151 VDNDADFQGTKRACRCLILDDCEKREIKK--VNVSEE------GPLNSAVVEEITGYLAV 202
+ + + L D K +KK + +S++ GPL +V T
Sbjct: 358 KSSHEITEKSTEETEKLKNDQQAKIPLKKREIKLSDDFDSPVKGPLCKSVTP--TKEFLK 415
Query: 203 NGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVAENGDTDTQTSMFLDSRKEDSYI 262
+ + + G+ + + V E+ VA N T+ + F ++ KE+SY
Sbjct: 416 DEIKQEEETCKRISTITALGHEGKQLVNGEVSDER-VAPNFKTEPIETKFYET-KEESYS 473
Query: 263 DHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPATGPFSETQSSLRDSEEEVDVVG 322
K D I+T E +N + T TG + + LR + V
Sbjct: 474 PSK-------------DRNIITEGNGTESLNSVITSMKTGELEKETAPLRKDADSSISVL 520
Query: 323 DSSASKEQCKENTNNELDTSLES 345
+ + K Q +E E++TSL+S
Sbjct: 521 EIHSQKAQIEEPDPPEMETSLDS 543
>gi|94538370 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform 1
[Homo sapiens]
Length = 621
Score = 43.5 bits (101), Expect = 9e-04
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 655 WTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKA 709
WT EEQK LEQ L YP E RW+KIA+ + RT K R K +++ KA
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPE--RWEKIAEAVPGRTKKDCMKR-YKELVEMVKA 605
>gi|193788632 DnaJ (Hsp40) homolog, subfamily C, member 2 isoform 2
[Homo sapiens]
Length = 568
Score = 43.5 bits (101), Expect = 9e-04
Identities = 25/55 (45%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 655 WTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKA 709
WT EEQK LEQ L YP E RW+KIA+ + RT K R K +++ KA
Sbjct: 501 WTTEEQKLLEQALKTYPVNTPE--RWEKIAEAVPGRTKKDCMKR-YKELVEMVKA 552
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 41.6 bits (96), Expect = 0.003
Identities = 39/206 (18%), Positives = 73/206 (35%), Gaps = 8/206 (3%)
Query: 274 QVKLEDHKIVTACLPVEHVNQLTTEPATGPFSETQSSLRDSEEEVD-VVGDSSASKEQCK 332
Q E+H P ++L T P+ GP S T +L + ++ GD +
Sbjct: 1610 QEDTENHPKTPESAPENKDSELKTPPSVGPPSVTVVTLESAPSALEKTTGDKTVEAPLVT 1669
Query: 333 ENTNNELDTSLESMPASGEPEPSPVLDCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSP 392
E E T E + EP P+PV + ++P + + + P
Sbjct: 1670 EEKTVEPATVSEEAKPASEPAPAPVEQLEQVDLPPGADPDKEAAMMPAGVEEGSSGDQPP 1729
Query: 393 TKNSSPYRENGQFE--ENNLSPNETNATVSDNVSQSPTNPGEISQNEKGICCDSQNNGSE 450
++ P F E+N+ P + +Q E + D++ + ++
Sbjct: 1730 YLDAKPPTPGASFSQAESNVDPEPDSTQPLSKPAQKSEEANEPKAEKPDATADAEPDANQ 1789
Query: 451 GV-----SKPPSEARLNIGHLPSAKE 471
S+PP+ L + +AK+
Sbjct: 1790 KAEAAPESQPPASEDLEVDPPVAAKD 1815
Score = 38.9 bits (89), Expect = 0.022
Identities = 98/460 (21%), Positives = 164/460 (35%), Gaps = 89/460 (19%)
Query: 37 EEISSNSQVRSR----SPKKRPEPVPIQKGNNNGRTTDLKQQSTRESWVSPRKRGLSSSE 92
EE + + Q R R + K PE P++ + ++ S KRG S +
Sbjct: 2034 EEEAGSEQKRDRKDAGTDKNPPETAPVE----------VVEKKPAPEKNSKSKRGRSRNS 2083
Query: 93 KDNIERQAIENCERRQTEPVSPVLKRIKRCLRSEAPNSSEEDSPIKSDKESVEQRSTVVD 152
+ +++ A P + +R A + + +SP K D S + +S VD
Sbjct: 2084 RLAVDKSASLKNVDAAVSPRGAAAQAGERESGVVAVSPEKSESPQKEDGLSSQLKSDPVD 2143
Query: 153 NDADFQGTKRACRCLILDDCEKREIKKVNVSEEGPLNSAV-------VEEITGYLAVNGV 205
D +E +K +VS GP A +E+ ++A
Sbjct: 2144 PD--------------------KEPEKEDVSASGPSPEATQLAKQMELEQAVEHIA-KLA 2182
Query: 206 DDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVAENGDTDTQT---SMFLDSRKEDSYI 262
+ S SA D P+G ++ ++K + +T+ S+ D E
Sbjct: 2183 EASASAAYKAD--APEGLAPED-------RDKPAHQASETELAAAIGSIINDISGEPENF 2233
Query: 263 DHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPATGPFSETQSSLRDSEEEVDVVG 322
P + Q L+ A P E + T+ A ET+++ S V+
Sbjct: 2234 PAPPPYP-GESQTDLQPPAGAQALQPSEE--GMETDEAVSGILETEAATESSRPPVNAP- 2289
Query: 323 DSSASKEQCKENTNNELDTSLESMPASGEPEPSPVLDCVSAQMMSLSEPQEHRYTLRTSP 382
D SA KE N +TS A G E L + + + + T R+
Sbjct: 2290 DPSAGPTDTKEARGNSSETSHSVPEAKGSKEVEVTL---------VRKDKGRQKTTRSRR 2340
Query: 383 RRAAPTRG-SPTKNSSPYRENGQFEENNLSPNETNATVSDNVSQSPTNPGEISQNEKGIC 441
+R + +P ++ P E+N + E+ A Q P P E Q+EK
Sbjct: 2341 KRNTNKKVVAPVESHVP--------ESNQAQGESPAANEGTTVQHPEAPQEEKQSEK--- 2389
Query: 442 CDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQHITEEE 481
S PP ++ +PS E++SQ I+ EE
Sbjct: 2390 ---------PHSTPPQSCTSDLSKIPST-ENSSQEISVEE 2419
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 40.4 bits (93), Expect = 0.007
Identities = 70/371 (18%), Positives = 131/371 (35%), Gaps = 31/371 (8%)
Query: 125 SEAPNSSEE-DSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLILDDCEKREIKKVNVS 183
S++ NSSE DS SD +S + + N +D + + D + + S
Sbjct: 693 SDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSS------DSSDSSNSSDSSDS 746
Query: 184 EEGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVAENG 243
+ +S + + + D SDS+ + D N NS S S + N
Sbjct: 747 SDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNS 806
Query: 244 DTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPATGP 303
+ +S DS +S +DS D + + + + +
Sbjct: 807 SDSSDSSDSSDSDSSNS--------SDSSNSSDSSDSSNSS-----DSSDSSDSSDGSDS 853
Query: 304 FSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPE--------PS 355
S +S +S + D DSS S + + +NE S +S +S + S
Sbjct: 854 DSSNRSDSSNSSDSSDS-SDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNSS 912
Query: 356 PVLDCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNET 415
D ++ S S S + + S + NSS N N+ +++
Sbjct: 913 DSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSD-SSNSSDSSNSSDSSDS 971
Query: 416 NATVSDNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQ 475
N++ S + S S + ++ DS N+ S S++ N ++ +S++
Sbjct: 972 NSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSS-NSSDSSNSSDSSNS 1030
Query: 476 HITEEEDDDPD 486
+ + D D
Sbjct: 1031 SDSSDSSDSSD 1041
Score = 40.0 bits (92), Expect = 0.010
Identities = 65/376 (17%), Positives = 127/376 (33%), Gaps = 9/376 (2%)
Query: 125 SEAPNSSEEDSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLILDDCEKREIKKVNVSE 184
SE+ NSS+ + S S S+ N +D + + D + + S
Sbjct: 924 SESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSS 983
Query: 185 EGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVAENGD 244
+ +S + + N D SDS+ + D + +S S + S + +
Sbjct: 984 DSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSS 1043
Query: 245 TDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPATGPF 304
+ +S DS D S + + + N + ++
Sbjct: 1044 DSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSS 1103
Query: 305 SETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPVLDCVSAQ 364
+ SS DS + D DSS S + + +++ S S +S E S D +
Sbjct: 1104 DSSDSS--DSSDSSDS-SDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESSDSSDSSDSS 1160
Query: 365 MMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNATVSDNVS 424
S S S + + S + +SS ++ +++ S + ++++ S + S
Sbjct: 1161 DSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1220
Query: 425 QSPTNPGEISQNEKGICCDSQ------NNGSEGVSKPPSEARLNIGHLPSAKESASQHIT 478
S + NE DS N+ S S++ + ++ +
Sbjct: 1221 DSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNN 1280
Query: 479 EEEDDDPDVYYFESDH 494
D D D +S+H
Sbjct: 1281 NGSDSDSDSEGSDSNH 1296
Score = 38.1 bits (87), Expect = 0.037
Identities = 67/379 (17%), Positives = 127/379 (33%), Gaps = 21/379 (5%)
Query: 125 SEAPNSSEEDSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLILDDCEKREIKKVNVSE 184
S++ NSS DS SD +S + S+ + +D + D + N S+
Sbjct: 555 SDSSNSS--DSSDSSDSDSSDSNSSSDSDSSDSDSS---------DSSDSDSSDSSNSSD 603
Query: 185 EGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVAENGD 244
+ + + + + D S S + D ++ NS S + S + N
Sbjct: 604 SSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSS 663
Query: 245 TDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQLTTEPATGPF 304
+ +S DS S D S E + + +
Sbjct: 664 NSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSS---------ESSDSSDSSDSDSSD 714
Query: 305 SETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPVLDCVSAQ 364
S S+ S+ + DSS S + +++ S +S +S S D +
Sbjct: 715 SSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSS 774
Query: 365 MMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNATVSDNV- 423
S S S + + S + NSS ++ +++ S + ++ SD+
Sbjct: 775 DSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSD 834
Query: 424 SQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQHITEEEDD 483
S + ++ + S + G DS N S S++ + S+ S S + D
Sbjct: 835 SSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDS 894
Query: 484 DPDVYYFESDHVALKHNKD 502
+SD ++ D
Sbjct: 895 SDSSNSSDSDSSDSSNSSD 913
>gi|18034775 PHD finger protein 20 [Homo sapiens]
Length = 1012
Score = 39.7 bits (91), Expect = 0.013
Identities = 89/407 (21%), Positives = 144/407 (35%), Gaps = 43/407 (10%)
Query: 74 QSTRESWVSP-RKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIKRCLRSEAP---- 128
+S +E+ P RKRG S I A+++ + +P++ L+R K E P
Sbjct: 247 KSPQENLREPKRKRGRPPS----IAPTAVDS-NSQTLQPITLELRRRKISKGCEVPLKRP 301
Query: 129 ----NSSEEDSPIKS---DKESVEQRSTVVDNDADFQ--GTKRACRCLILDDCEKREIKK 179
NSS+E S S DK+ +RS+ + + + L+ D + +
Sbjct: 302 RLDKNSSQEKSKNYSENTDKDLSRRRSSRLSTNGTHEILDPDLVVSDLVDTDPLQDTLSS 361
Query: 180 VNVSEEGPLNSAV-VEEITGYLAVNGVDDSDSAV---INCDDCQPDGNTKQNSIGSYVLQ 235
SEEG L SA+ +++ L + D A +NC + + + LQ
Sbjct: 362 TKESEEGQLKSALEAGQVSSALTCHSFGDGSGAAGLELNCPSMGENTMKTEPTSPLVELQ 421
Query: 236 EKSVAENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEHVNQL 295
E S E +T +T F S +DHK C K++ + H +
Sbjct: 422 EISTVEVTNTFKKTDDFGSSNAPAVDLDHKFRCKVVDCLKFFRKAKLLHYHMKYFHGMEK 481
Query: 296 TTEPATGP-----------FSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLE 344
+ EP P S+ S + + V ++ KE+ KE E
Sbjct: 482 SLEPEESPGKRHVQTRGPSASDKPSQETLTRKRVSASSPTTKDKEKNKEKKFKEFVRVKP 541
Query: 345 SMPASGEPEPSPVLDCVSAQMMSLSEPQEHRYTLRTSPRRAAPTR-GSPTKNSSPYRENG 403
+ + P C + EP + P+ A TR GS K
Sbjct: 542 KKKKKKKKKTKPECPCSEEISDTSQEP--------SPPKAFAVTRCGSSHKPGVHMSPQL 593
Query: 404 QFEENNLSPNETNATVSDNVSQSPTNPGEISQNEKGICCDSQNNGSE 450
E+ + A DN+S+S + S +E G D N E
Sbjct: 594 HGPESGHHKGKVKALEEDNLSESSSESFLWSDDEYGQDVDVTTNPDE 640
>gi|30348954 mindbomb homolog 1 [Homo sapiens]
Length = 1006
Score = 39.3 bits (90), Expect = 0.017
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Query: 816 VQHVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSC 853
++H G CD C +PI G+RW C +C + D C C
Sbjct: 78 IKHDGTMCDTCRQQPIIGIRWKCAEC---TNYDLCTVC 112
>gi|55741473 HECT, C2 and WW domain containing E3 ubiquitin protein
ligase 2 [Homo sapiens]
Length = 1572
Score = 39.3 bits (90), Expect = 0.017
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 24/190 (12%)
Query: 307 TQSSLRDSE-EEVDVVGDSSASKEQCKENTNNELDTSLESMPA----SGEPEPSPVLDCV 361
+Q+ L D+ E + +AS E EN ++SL + PA G PEP P D
Sbjct: 504 SQTKLEDNPVENEEASTHEAASFEDKPENLPELAESSLPAGPAPEEGEGGPEPQPSADQG 563
Query: 362 SAQMMSLSEPQEHRYTLRT-------SPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNE 414
SA++ E + T RRA S + S P + + + E ++ P
Sbjct: 564 SAELCGSQEVDQPTSGADTGTSDASGGSRRAVSETESLDQGSEPSQVSSETEPSD--PAR 621
Query: 415 TNATVSDNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESAS 474
T ++VS++ T P S E C DS N E V+ S L SA+ +
Sbjct: 622 T-----ESVSEASTRPEGESDLE---CADSSCN--ESVTTQLSSVDTRCSSLESARFPET 671
Query: 475 QHITEEEDDD 484
+ +E++D
Sbjct: 672 PAFSSQEEED 681
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 38.9 bits (89), Expect = 0.022
Identities = 78/445 (17%), Positives = 179/445 (40%), Gaps = 41/445 (9%)
Query: 36 PEEISSNSQVRSRSPKKRPEPVPIQKGNNNGRTTDLKQQSTRESWVSPRKRGLSSSEKDN 95
P + + S ++SP+K PV + + + +K+++ + V ++ S ++++
Sbjct: 587 PAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEA 646
Query: 96 IERQAIENCERRQTEPVSPVLKRIKRCLRSEAPNSSEEDSPIKSDKESVEQRSTVVDNDA 155
+ ++ E+ + + SP ++ K +++EA + + SP+K++ +S E+ + V +A
Sbjct: 647 KSPEKAKSPEKEEAK--SP--EKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEA 702
Query: 156 DFQGTKRACRCLILDDCEKREIKKVNVSEEG----PLNSAVVEEITGYLAVNGVDDSDSA 211
+ + + ++ + E K V EE S V EE + + +
Sbjct: 703 K---SPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTL 759
Query: 212 VINCDDCQPDGNTKQNSIGSYVLQEKSVAENGDTDTQTSMFLDSRKEDSYIDHKVPCTDS 271
+ + + + S EK+ + + KED+ K
Sbjct: 760 DVKSPEAKTPAKEEARSPAD-KFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKE 818
Query: 272 QVQVKLEDHKIVTACLPVEHVNQLTTEPATGPFSETQSSLRDSEEEVDVVGDSSASKEQC 331
+V+ +++ + E + E A P + +DS++E A K +
Sbjct: 819 EVKSPVKEEEKPQEVKVKEPPKKAEEEKA--PATPKTEEKKDSKKE--EAPKKEAPKPKV 874
Query: 332 KENTNNELDTSLESMPASGEPE-------PSPVLDC-VSAQMMSLSEPQEHRYTLRTSP- 382
+E ++ ES + + E P+P + ++ ++P+E + P
Sbjct: 875 EEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEPD 934
Query: 383 --RRAAPTRGSPTKNSSPYRENGQFEENNLSPNE---TNATVSDN---VSQSPTNPGEIS 434
+ P++ + K ++P +++ + EE P E T A ++ +S+ P+ P +
Sbjct: 935 DAKAKEPSKPAEKKEAAPEKKDTK-EEKAKKPEEKPKTEAKAKEDDKTLSKEPSKP-KAE 992
Query: 435 QNEKGICCDSQNNGSEGVSKPPSEA 459
+ EK D ++ SKPP +A
Sbjct: 993 KAEKSSSTDQKD------SKPPEKA 1011
Score = 30.8 bits (68), Expect = 5.9
Identities = 122/628 (19%), Positives = 217/628 (34%), Gaps = 97/628 (15%)
Query: 78 ESWVSPRKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIKRCLRSEAPNSSEEDSPI 137
E W R LS + K N + A+ + + TE R + + E +
Sbjct: 290 EEWFRVRLDRLSEAAKVNTD--AMRSAQEEITE------------YRRQLQARTTELEAL 335
Query: 138 KSDKESVE-QRSTVVD-NDADFQGTKRACRCLILDDCEKREIKKVNVSEEGPLNSAVVEE 195
KS K+S+E QRS + D + AD + A + L D E R K ++ + E
Sbjct: 336 KSTKDSLERQRSELEDRHQADIASYQEAIQQL---DAELRNTKWEMAAQ--------LRE 384
Query: 196 ITGYLAVNGVDDSDSA----VINCDDCQ----------PDGNTKQNSIGSYVL---QEK- 237
L V D + A ++ ++C+ P+G K S+ +++ +EK
Sbjct: 385 YQDLLNVKMALDIEIAAYRKLLEGEECRIGFGPIPFSLPEGLPKIPSVSTHIKVKSEEKI 444
Query: 238 SVAENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVT------ACLPVEH 291
V E + +T + ++ + E++ + +V + + + K E+ K A E
Sbjct: 445 KVVEKSEKET---VIVEEQTEETQVTEEVT-EEEEKEAKEEEGKEEEGGEEEEAEGGEEE 500
Query: 292 VNQLTTEPATGPFSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGE 351
E A P E +S ++ EE S KE+ K + +S PA E
Sbjct: 501 TKSPPAEEAASPEKEAKSPVK--EEAKSPAEAKSPEKEEAKSPAEVKSPEKAKS-PAKEE 557
Query: 352 PEPSPVLDCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLS 411
+ P + S + P E + SP K SP +E + S
Sbjct: 558 AKSPP--EAKSPEKEEAKSPAEVK---------------SPEKAKSPAKEEAKSPAEAKS 600
Query: 412 PNETNATVSDNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKE 471
P + + V + + + K S K P +A+ KE
Sbjct: 601 PEKAKSPVKEEAKSPAEAKSPVKEEAK----------SPAEVKSPEKAK------SPTKE 644
Query: 472 SASQHITEEEDDDPDVYYFESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQ 531
A + + + E +K ++ EA+ + +
Sbjct: 645 EAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKS 704
Query: 532 REALKNPIGFVEKLQKKADIGLPYPQRVVQLPEIVWDQYTHSLGNFEREFKNRKRHTRRV 591
E K+P+ K +KA + + + PE + E+ K T V
Sbjct: 705 PEKAKSPVKEEAKSPEKAKSPV---KEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDV 761
Query: 592 KLVFDKVGLPARPKSPLDPKKDGESLSYSMLPLSDGPEGSSSRPQMIRGRLCDDTKPETF 651
K K +SP D K E + PE + S P + + P+
Sbjct: 762 KSPEAKTPAKEEARSPAD--KFPEKAKSPVKEEVKSPEKAKS-PLKEDAKAPEKEIPKKE 818
Query: 652 NQLWTVEEQKKLEQLLIKYPPEEVESRR 679
V+E++K +++ +K PP++ E +
Sbjct: 819 EVKSPVKEEEKPQEVKVKEPPKKAEEEK 846
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 38.9 bits (89), Expect = 0.022
Identities = 43/206 (20%), Positives = 77/206 (37%), Gaps = 32/206 (15%)
Query: 298 EPATGPFSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPV 357
+ A SE D EE V +V + + + + ++E ++S ES P+S E E V
Sbjct: 1080 DTALSEASEKDEGDSDEEETVSIVTSKAEATSSSESSESSEFESSSESSPSSSEDEEEVV 1139
Query: 358 L----------DCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEE 407
+ V+ + M+ + P++ AA G+P +S E E
Sbjct: 1140 AREEEEEEEEEEMVAEESMASAGPED----FEQDGEEAALAPGAPAVDSLGMEEEVDIET 1195
Query: 408 NNLSPNETNATVS--------DNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEA 459
++P E + + + + S P E +++G S ++ V P
Sbjct: 1196 EAVAPEERPSMLDEPPLPVGVEEPADSREPPEEPGLSQEGAMLLSPEPPAKEVEARP--- 1252
Query: 460 RLNIGHLPSAKESASQHITEEEDDDP 485
P + E A +H E E + P
Sbjct: 1253 -------PLSPERAPEHDLEVEPEPP 1271
>gi|126032348 hect domain and RLD 2 [Homo sapiens]
Length = 4834
Score = 38.5 bits (88), Expect = 0.028
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 818 HVGFKCDNCGIEPIQGVRWHCQDCPPEMSLDFCDSC 853
H G CD C + PI G R+ C++C DFC++C
Sbjct: 2703 HPGVTCDGCQMFPINGSRFKCRNCD---DFDFCETC 2735
>gi|21361912 DnaJ (Hsp40) homolog, subfamily C, member 1 [Homo
sapiens]
Length = 554
Score = 38.5 bits (88), Expect = 0.028
Identities = 33/151 (21%), Positives = 60/151 (39%), Gaps = 11/151 (7%)
Query: 655 WTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASRVQKYFIKLTKAGIPVP 714
WT E+ +L + ++K+P RW+KIA ELG R+ V ++ ++ +T
Sbjct: 330 WTEEDLSQLTRSMVKFPGGT--PGRWEKIAHELG-RSVTDVTTKAKQLKDSVT------- 379
Query: 715 GRTPNLYIYSKKSSTSRRQHPLNKHLFKPSTFMTSHEPPVYMDEDDDRSCFHSHMNTAVE 774
+P + S+ ST + P+ P +T E + ++++ T
Sbjct: 380 -CSPGMVRLSELKSTVQNSRPIKTATTLPDDMITQREDAEGVAAEEEQEGDSGEQETGAT 438
Query: 775 DASDDESIPIMYRNLPEYKELLQFKKLKKQK 805
DA P E + + K+QK
Sbjct: 439 DARPRRRKPARLLEATAKPEPEEKSRAKRQK 469
>gi|117676384 splicing factor, arginine/serine-rich 2, interacting
protein [Homo sapiens]
Length = 1463
Score = 38.1 bits (87), Expect = 0.037
Identities = 64/299 (21%), Positives = 105/299 (35%), Gaps = 58/299 (19%)
Query: 218 CQPDGNTKQNSIGSYVLQEKSVAENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKL 277
C GN N+I E ++ +N +T+ L+ + E L
Sbjct: 649 CDTFGNEDFNNIQD---SENNLLKNNLLNTKLEKSLEEKNES-----------------L 688
Query: 278 EDHKIVTACLPVEHVNQLTTEPATGPFSETQSSL------------RDSEEEVDVVGDSS 325
+H T LP H+ Q+ FSE + + +SE E V D
Sbjct: 689 TEHPRSTE-LPKTHIEQIQKH-----FSEDNNEMIPMECDSFCSDQNESEVEPSVNADLK 742
Query: 326 ASKEQ----CKENTNNELDTSLESMPASGEPEPSPVLDCVSAQMMSLSEPQEHRYTLRTS 381
E C EN D + E + +P SP + + H + S
Sbjct: 743 QMNENSVTHCSENNMPSSDLADEKVETVSQPSESPKDTIDKTKKPRTRRSRFHSPSTTWS 802
Query: 382 PRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNATV---SDNVSQSPTNPGEISQNEK 438
P + P ++ SP RE G+ + SP+ N + + SQSP +I++ +
Sbjct: 803 PNKDTPQEKKRPQSPSPRRETGKESRKSQSPSPKNESARGRKKSRSQSPKK--DIARERR 860
Query: 439 GICCDS-------QNNGSEGVSKPPSEARLNIGHLPSAKESA----SQHITEEEDDDPD 486
S ++ SE +S +R N P K+S+ S+ + E + D D
Sbjct: 861 QSQSRSPKRDTTRESRRSESLSPRRETSRENKRSQPRVKDSSPGEKSRSQSRERESDRD 919
>gi|62821787 COBL-like 1 [Homo sapiens]
Length = 1166
Score = 38.1 bits (87), Expect = 0.037
Identities = 84/407 (20%), Positives = 160/407 (39%), Gaps = 64/407 (15%)
Query: 13 TVGLNGLDESFC--GRTLRNRSIAHPEEISSNSQVRSRSPKKRPEP---VPIQKGNNNGR 67
++ ++ D+S C GR +R S+ + NS +R R+ +K P P +P + + N R
Sbjct: 324 SMSVDETDKSPCEAGR-VRAGSLQLSSMSAGNSSLR-RTKRKAPSPPSKIPPHQSDENSR 381
Query: 68 TTDLK-----------QQSTRESWVSPRK--RGLSSSEKDN----IERQAIENCERRQTE 110
T L+ + ++ E SP GLSS E+ +E ++ C
Sbjct: 382 VTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEA 441
Query: 111 PVSPVLKRIKRCLRSEAPNSSEEDSPI-KSDKESVEQRS-----------TVVDNDADFQ 158
++ + I E + EE S + K + E++ +S + ND D
Sbjct: 442 AITSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSA 501
Query: 159 GTKRACRCLILDDCEKREIKKVNVSEEGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDC 218
+ EK+E K + E +S V + G V+ + + S N ++
Sbjct: 502 LGNGSGEFSQNSMEEKQETKSTDGQEP---HSVVYDTSNGKKVVDSIRNLKSLGPNQENV 558
Query: 219 QPD-----GNTK---QNSIGSYVLQEKSVAENGDTDTQTSMFLDSRKEDSYIDHKVPCTD 270
Q + NT+ +N + + + VA+N + D + +S + TD
Sbjct: 559 QNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHE---------TD 609
Query: 271 SQVQVKLEDHKIVTACLPVEHVNQLTTEPATGPFSETQSSLRDSEEEVDVVGDSSASKEQ 330
+ + K E+H + + +P + +NQ + E +T S + + S + E+
Sbjct: 610 TAISYK-ENH-LAASSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEE 667
Query: 331 CKENTNNELDT------SLESMPASGEPEPSPVLDCVSAQMMSLSEP 371
C + +NN + T S +S+ S E L S +++ +P
Sbjct: 668 CVQTSNNNISTQHSCLSSQDSVNTSREFRSQGTLIIHSEDPLTVKDP 714
>gi|56606114 trichohyalin-like 1 [Homo sapiens]
Length = 904
Score = 37.7 bits (86), Expect = 0.049
Identities = 88/418 (21%), Positives = 152/418 (36%), Gaps = 83/418 (19%)
Query: 120 KRCLRSEAP-----NSSEEDSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLILD---- 170
K C + P + E S ++ +++ E+R A + R R L+L+
Sbjct: 365 KECETKDLPVQYGSRNGSETSDMRDERK--ERRGPEAHGTAGQKERDRKTRPLVLETQTQ 422
Query: 171 DCEKREIKKVNVSEEGPLNSAVVEEITGYLAVNGVDDS----DSAVINCDDCQPDGNTKQ 226
D + +E++ ++ S++ S T YL+ G D + + ++ ++ + +TK+
Sbjct: 423 DGKYQELQGLSKSKDAEKGSE-----TQYLSSEGGDQTHPELEGTAVSGEEAE---HTKE 474
Query: 227 NSIGSYVLQEKSVAENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQVKLEDHKIVTAC 286
+ ++V + + A + ++ R +D K ++ K D
Sbjct: 475 GTAEAFVNSKNAPA------AERTLGARERTQDLAPLEKQSVGENTRVTKTHDQ------ 522
Query: 287 LPVEHVNQLTTEPATGPF-------SETQSSLRDSEE-------EVDVVGDSSASKEQCK 332
PVE + E PF SET +SL E E+ V GDS + +Q
Sbjct: 523 -PVEEEDGYQGEDPESPFTQSDEGSSETPNSLASEEGNSSSETGELPVQGDSQSQGDQHG 581
Query: 333 ENT----NNELDTSLESMPASGEPEPSPVLDCVSAQMMSLSEPQEHRYTLRTSPRRAAPT 388
E+ NN DT + P V+ V + + L+E QE R + P
Sbjct: 582 ESVQGGHNNNPDTQRQGTPGEKNRALEAVVPAVRGEDVQLTEDQEQ--PARGEHKNQGPG 639
Query: 389 RGSP----TKNSSPYRENGQFEENNLSPNETNAT------VSDNVS--QSPTN------- 429
P N P + + N E T +D +S Q P
Sbjct: 640 TKGPGAAVEPNGHPEAQESTAGDENRKSLEIEITGALDEDFTDQLSLMQLPGKGDSRNEL 699
Query: 430 --PGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESASQHITEEEDDDP 485
G S+ EKG ++QN E + + N L E+ +EEED+ P
Sbjct: 700 KVQGPSSKEEKGRATEAQNTLLESLDED------NSASLKIQLETKEPVTSEEEDESP 751
>gi|225543215 antigen identified by monoclonal antibody Ki-67 isoform
2 [Homo sapiens]
Length = 2896
Score = 37.0 bits (84), Expect = 0.083
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 1 MAASRSTRVTRSTVGLNGLDESFCGRTLRN--RSIAHPEEISSNSQVRSRSPKKRPEPVP 58
+ AS+ RV G + R+LR + I EE++SN ++ K + VP
Sbjct: 2665 LPASKKQRVAPRARGKSSEPVVIMKRSLRTSAKRIEPAEELNSNDMKTNKEEHKLQDSVP 2724
Query: 59 IQKG----NNNGRTTDLKQQSTRESWVSPRKRGLSSSEKDNIE---RQAIENCERRQTEP 111
KG + T+ +QQ T E +V + ++ +EK ++ I+N + +P
Sbjct: 2725 ENKGISLRSRRQNKTEAEQQIT-EVFVLAERIEINRNEKKPMKTSPEMDIQNPDDGARKP 2783
Query: 112 V-SPVLKRIKRCLRSEAPNSSEEDSPIKSDKESVEQRSTVV 151
+ + KRCLRS N E S K +ES Q+S V
Sbjct: 2784 IPRDKVTENKRCLRSARQN---ESSQPKVAEESGGQKSAKV 2821
>gi|103472005 antigen identified by monoclonal antibody Ki-67 isoform
1 [Homo sapiens]
Length = 3256
Score = 37.0 bits (84), Expect = 0.083
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 1 MAASRSTRVTRSTVGLNGLDESFCGRTLRN--RSIAHPEEISSNSQVRSRSPKKRPEPVP 58
+ AS+ RV G + R+LR + I EE++SN ++ K + VP
Sbjct: 3025 LPASKKQRVAPRARGKSSEPVVIMKRSLRTSAKRIEPAEELNSNDMKTNKEEHKLQDSVP 3084
Query: 59 IQKG----NNNGRTTDLKQQSTRESWVSPRKRGLSSSEKDNIE---RQAIENCERRQTEP 111
KG + T+ +QQ T E +V + ++ +EK ++ I+N + +P
Sbjct: 3085 ENKGISLRSRRQNKTEAEQQIT-EVFVLAERIEINRNEKKPMKTSPEMDIQNPDDGARKP 3143
Query: 112 V-SPVLKRIKRCLRSEAPNSSEEDSPIKSDKESVEQRSTVV 151
+ + KRCLRS N E S K +ES Q+S V
Sbjct: 3144 IPRDKVTENKRCLRSARQN---ESSQPKVAEESGGQKSAKV 3181
>gi|238624188 diffuse panbronchiolitis critical region 1 protein
[Homo sapiens]
Length = 1393
Score = 36.6 bits (83), Expect = 0.11
Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 22/190 (11%)
Query: 303 PFS--ETQSSLRDSEE--EVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPVL 358
PF+ +T SS +S E E + + + + + N E + + P+ P +
Sbjct: 407 PFANDKTTSSSAESTEHGERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRET 466
Query: 359 DCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNS--SPYRENGQFEENNLSP---N 413
+S EP E+R T T+ + P+ PT+N +P+ N + ++ P
Sbjct: 467 TANEKTTLSPVEPTENRET--TANEKTTPSPAEPTENGQRTPF-ANEKTTSSSAEPTEHG 523
Query: 414 ETNATVSDNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESA 473
E ++N + SP P E + + +E + P+E N P A E
Sbjct: 524 ERTPLANENTTPSPAEPTE----------NRERTANEKTTPSPAEPTENGDRTPLANEKT 573
Query: 474 SQHITEEEDD 483
+ + E ++
Sbjct: 574 TPSLAEPTEN 583
Score = 33.5 bits (75), Expect = 0.92
Identities = 75/442 (16%), Positives = 151/442 (34%), Gaps = 61/442 (13%)
Query: 27 TLRNRSIAHPEEISSNSQVRSRSPKKRPEPVPIQKGNNNGRTTDLKQQSTRESWVSPRKR 86
T ++ P E + N R R+ ++ P + NG+ T + T S P +
Sbjct: 648 TANEKTTLFPAEPTEN---RERTANEKTTSSPAEP-TENGQRTPFANEKTTSSSAEPTEH 703
Query: 87 GLSSSEKDNIERQAIENCERRQTEPVSPVLKRIKRCLRSEAPNSSEEDSPIKSDKESVEQ 146
G ER + N E P P R + P +E P ++ + + +
Sbjct: 704 G---------ERTPLAN-ENTTLSPAEPTENRERTANEKTTPFPAE---PTENRERTANE 750
Query: 147 RSTVVDNDADFQGTKRACRCLILDDCEKREIKKVNVSEEGPLNSAVVEEITGYLA----- 201
+T + Q T+ R + + EK +E G E+ T A
Sbjct: 751 NTT----PSPAQPTENGDRTPLAN--EKTTPSLAEPTENGKRTPFANEKTTSSSAEPTEH 804
Query: 202 -----VNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVAENGDTDTQTSMFLDSR 256
+ + + S ++ + N K + + + N T + ++R
Sbjct: 805 AERTPLANENTTSSPAEPTENRERTANEKTTQFPAEPTENRESTANEKTTPFPAEPTENR 864
Query: 257 K----EDSYIDHKVPCTDSQVQVKLEDHKIVTACLPVEH------VNQLTTEPATGPFSE 306
+ E++ + P ++ + ++ P E+ N+ TT + P
Sbjct: 865 EWTANENTTLSPAEPTEHEEMTPLANEKTTLSPAEPTENGERTPFTNEKTTPSSAEPTEH 924
Query: 307 ----------TQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSP 356
T S + E + + + A+ K + E + ++ P+S EP +
Sbjct: 925 GERTPLANEITTPSRAEPTEHGERIANEKATPSPAKPTEHGETTVNEDTTPSSAEPTENG 984
Query: 357 VLDCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSP---- 412
++ + + S + + RT+ + P+ PT++ R E+ SP
Sbjct: 985 ERTPLANENTTTSPTESTEHGERTANEKTTPSPAEPTEHGE--RTPSANEKTIPSPAKPT 1042
Query: 413 --NETNATVSDNVSQSPTNPGE 432
E + ++N + SP P E
Sbjct: 1043 EHEEMTPSANENTTPSPVKPTE 1064
Score = 30.8 bits (68), Expect = 5.9
Identities = 46/215 (21%), Positives = 73/215 (33%), Gaps = 32/215 (14%)
Query: 288 PVEHVNQ--LTTEPATG-PFSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLE 344
P EH + L E T P T++ R + E+ A + +E+T NE T
Sbjct: 801 PTEHAERTPLANENTTSSPAEPTENRERTANEKTT---QFPAEPTENRESTANEKTT--- 854
Query: 345 SMPASGEPEPSPVLDCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQ 404
P EP + +S +EP EH + + + PT+N E
Sbjct: 855 --PFPAEPTENREWTANENTTLSPAEPTEHEEMTPLANEKTTLSPAEPTENG----ERTP 908
Query: 405 FEENNLSPNETNAT-----------VSDNVSQSPTNPGEISQNEKGICCDS------QNN 447
F +P+ T ++ PT GE NEK + +
Sbjct: 909 FTNEKTTPSSAEPTEHGERTPLANEITTPSRAEPTEHGERIANEKATPSPAKPTEHGETT 968
Query: 448 GSEGVSKPPSEARLNIGHLPSAKESASQHITEEED 482
+E + +E N P A E+ + TE +
Sbjct: 969 VNEDTTPSSAEPTENGERTPLANENTTTSPTESTE 1003
>gi|239740773 PREDICTED: similar to diffuse panbronchiolitis
critical region 1 [Homo sapiens]
Length = 1400
Score = 36.6 bits (83), Expect = 0.11
Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 22/190 (11%)
Query: 303 PFS--ETQSSLRDSEE--EVDVVGDSSASKEQCKENTNNELDTSLESMPASGEPEPSPVL 358
PF+ +T SS +S E E + + + + + N E + + P+ P +
Sbjct: 469 PFANDKTTSSSAESTEHGERTPLANENTTPSPAEPTENRERTANENTTPSPAGPTENRET 528
Query: 359 DCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNS--SPYRENGQFEENNLSP---N 413
+S EP E+R T T+ + P+ PT+N +P+ N + ++ P
Sbjct: 529 TANEKTTLSPVEPTENRET--TANEKTTPSPAEPTENGQRTPF-ANEKTTSSSAEPTEHG 585
Query: 414 ETNATVSDNVSQSPTNPGEISQNEKGICCDSQNNGSEGVSKPPSEARLNIGHLPSAKESA 473
E ++N + SP P E + + +E + P+E N P A E
Sbjct: 586 ERTPLANENTTPSPAEPTE----------NRERTANEKTTPSPAEPTENGDRTPLANEKT 635
Query: 474 SQHITEEEDD 483
+ + E ++
Sbjct: 636 TPSLAEPTEN 645
>gi|62988328 ankyrin repeat domain 50 [Homo sapiens]
Length = 1429
Score = 36.6 bits (83), Expect = 0.11
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 11/118 (9%)
Query: 40 SSNSQVRSRSPKKRPEPVPIQKGNNNGRTTDLKQQS-----TRESWVSPRKRGLSSSEKD 94
S NS +R+ S + VPI +N T ++Q S +R+S VSP S +
Sbjct: 1187 SKNSSLRTTSSTATAQTVPIDSFHNLSFTEQIQQHSLPRSRSRQSIVSPSSTTQSLGQSH 1246
Query: 95 NIERQAIENCERRQTEPVSPVLKRIKRCLRSEAPNSSEEDSPIKSDKESVEQRSTVVD 152
N E + V P LK K ++ NS++ S K K+S + V++
Sbjct: 1247 NSPSSEFEWSQ------VKPSLKSTKASKGGKSENSAKSGSAGKKAKQSNSSQPKVLE 1298
>gi|109659847 filamin A interacting protein 1-like isoform 3 [Homo
sapiens]
Length = 1133
Score = 36.2 bits (82), Expect = 0.14
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 491 ESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIGFVEKLQKKAD 550
E D V KH + Y+R+L + V E R Q + +LE R +E ++ F+ L+++ +
Sbjct: 142 ELDKVVEKHKESYRRILGQLLVAEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECE 201
>gi|109659845 filamin A interacting protein 1-like isoform 1 [Homo
sapiens]
Length = 1135
Score = 36.2 bits (82), Expect = 0.14
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 491 ESDHVALKHNKDYQRLLQTIAVLEAQRSQAVQDLESLGRHQREALKNPIGFVEKLQKKAD 550
E D V KH + Y+R+L + V E R Q + +LE R +E ++ F+ L+++ +
Sbjct: 142 ELDKVVEKHKESYRRILGQLLVAEKSRRQTILELEEEKRKHKEYMEKSDEFICLLEQECE 201
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 35.4 bits (80), Expect = 0.24
Identities = 76/374 (20%), Positives = 127/374 (33%), Gaps = 60/374 (16%)
Query: 99 QAIENCERRQTEPVSPVLKRIKRCLRSEA---PNSSEEDSPIKSDKESVEQRSTV--VDN 153
Q I++ +R +P P K+ K+ + SE +S E+ S S ST+ + +
Sbjct: 86 QTIKSTTKRSPKP--PNKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIRKIKS 143
Query: 154 DADFQGTKRACRCLILDDCEKREIKKVNVSEEGPLNSAVVEEITGYLAVNGVDDSDSAVI 213
+ + + L + D +K KK + VV+E A +G+D+ D V
Sbjct: 144 SKNSAANRELQKKLKVKDNKKNRTKKKPTPKP-----PVVDE-----AGSGLDNGDFKVT 193
Query: 214 NCDDCQPDGNTKQNS----IGSYVLQEKSVAENGDTDTQTSMFLDSR-----------KE 258
D N S + S+ N DT +TS+ ++ +
Sbjct: 194 TPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNK 253
Query: 259 DSYIDHKVPCTDSQVQVKLED---------HKIVTACLPVEHVNQ----LTT--EPATGP 303
+ D K T ++ +E K++ P LTT EP
Sbjct: 254 QTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTT 313
Query: 304 FSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASG-EP------EPSP 356
E S+ + + KE T + T E P + EP EP+P
Sbjct: 314 PKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAP 373
Query: 357 VLDCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETN 416
A + S P + T+P++ APT ++P E +P E
Sbjct: 374 TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPK------EPTPTTPKEPA 427
Query: 417 ATVSDNVSQSPTNP 430
T + +P P
Sbjct: 428 PTTKEPAPTTPKEP 441
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 35.4 bits (80), Expect = 0.24
Identities = 76/374 (20%), Positives = 127/374 (33%), Gaps = 60/374 (16%)
Query: 99 QAIENCERRQTEPVSPVLKRIKRCLRSEA---PNSSEEDSPIKSDKESVEQRSTV--VDN 153
Q I++ +R +P P K+ K+ + SE +S E+ S S ST+ + +
Sbjct: 127 QTIKSTTKRSPKP--PNKKKTKKVIESEEITEEHSVSENQESSSSSSSSSSSSTIRKIKS 184
Query: 154 DADFQGTKRACRCLILDDCEKREIKKVNVSEEGPLNSAVVEEITGYLAVNGVDDSDSAVI 213
+ + + L + D +K KK + VV+E A +G+D+ D V
Sbjct: 185 SKNSAANRELQKKLKVKDNKKNRTKKKPTPKP-----PVVDE-----AGSGLDNGDFKVT 234
Query: 214 NCDDCQPDGNTKQNS----IGSYVLQEKSVAENGDTDTQTSMFLDSR-----------KE 258
D N S + S+ N DT +TS+ ++ +
Sbjct: 235 TPDTSTTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNK 294
Query: 259 DSYIDHKVPCTDSQVQVKLED---------HKIVTACLPVEHVNQ----LTT--EPATGP 303
+ D K T ++ +E K++ P LTT EP
Sbjct: 295 QTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTT 354
Query: 304 FSETQSSLRDSEEEVDVVGDSSASKEQCKENTNNELDTSLESMPASG-EP------EPSP 356
E S+ + + KE T + T E P + EP EP+P
Sbjct: 355 PKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAP 414
Query: 357 VLDCVSAQMMSLSEPQEHRYTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETN 416
A + S P + T+P++ APT ++P E +P E
Sbjct: 415 TTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPK------EPTPTTPKEPA 468
Query: 417 ATVSDNVSQSPTNP 430
T + +P P
Sbjct: 469 PTTKEPAPTTPKEP 482
>gi|47419936 SFRS protein kinase 1 [Homo sapiens]
Length = 655
Score = 35.4 bits (80), Expect = 0.24
Identities = 45/227 (19%), Positives = 89/227 (39%), Gaps = 26/227 (11%)
Query: 54 PEPVPIQKGNNNGRTTDLKQQSTRESWVSPRKRGLSSSEKDNIERQAIENCERRQTEPVS 113
P+P P K + N + K+Q + + R + + EK++ Q N +Q E S
Sbjct: 255 PQPKPADKMSKNKKKKLKKKQKRQAELLEKRMQEIEEMEKESGPGQKRPN---KQEESES 311
Query: 114 PVLKRIKRCLRSEAPNSSEEDSPIKSDKESVEQRSTVVDNDADFQGTKRACRCLI----- 168
PV +R L+ PN ++ + ++ Q T+++ D + + C +I
Sbjct: 312 PV----ERPLKENPPNKMTQEK--LEESSTIGQDQTLMERDTEGGAAEINCNGVIEVINY 365
Query: 169 LDDCEKREIK-KVNVSEEGPLNSAVVEEITGYLAVNGVDDSDSAVINCDDCQPDGNTKQN 227
+ ++ K ++ + + + + +L+ D S S D C P + +
Sbjct: 366 TQNSNNETLRHKEDLHNANDCDVQNLNQESSFLSSQNGDSSTSQ--ETDSCTPITSEVSD 423
Query: 228 SIGSYVLQEKSVAENGDTDTQTSMFLDSRKEDSYIDHKVPCTDSQVQ 274
++ V Q S ++ S +S I ++PC D Q Q
Sbjct: 424 TM---VCQSSSTVGQSFSEQHISQLQES------IRAEIPCEDEQEQ 461
>gi|120587027 ubiquitin specific peptidase 31 [Homo sapiens]
Length = 1352
Score = 35.0 bits (79), Expect = 0.32
Identities = 95/445 (21%), Positives = 158/445 (35%), Gaps = 68/445 (15%)
Query: 22 SFCGRTLRNRSIAHPEEISSNSQVRSRSPKKRPEPVPIQKGNNNGRTTDLKQQSTRESWV 81
S C + + P ++S + R S E V + R+ D STR
Sbjct: 784 SLCEHWVSRLPGSKPASVTSAASSRRTSLASLSESVEM----TGERSEDDGGFSTRPFVR 839
Query: 82 SPRKRGLSSSEKDNIERQAIENCERRQTEPVSPVLKRIKRCLRSEAPNSSEEDSPIKSDK 141
S +++ LSS ENC R P + +++ +RS +P+ DSPI S
Sbjct: 840 SVQRQSLSSRSSVTSPLAVNENCMR----PSWSLSAKLQ--MRSNSPSRFSGDSPIHSSA 893
Query: 142 ESVEQRSTVVDNDADFQ--GTKRACRCLILDDCEKREIKKVNVSEEGPLNSAVVEEITGY 199
++E+ D+ G+ R + + ++ PL AV+E +
Sbjct: 894 STLEKIGEAADDKVSISCFGSLRNLSSSYQEPSDSHSRREHKAVGRAPL--AVMEGVF-- 949
Query: 200 LAVNGVDDSDSAVINCDDCQPDGNTKQNSIGSYVLQEKSVAENGDTDTQTSMFLDSRKED 259
D+SD+ +N S V + + GD S D+ +
Sbjct: 950 -----KDESDTRRLN---------------SSVVDTQSKHSAQGDRLPPLSGPFDNNNQI 989
Query: 260 SYIDHKVPCTDSQV-QVKLEDHKIVTACLPVEHVNQLTTEPATGPFSETQSSLRD----- 313
+Y+D S V +VK H A P + P++ SE + SLR
Sbjct: 990 AYVDQSDSVDSSPVKEVKAPSHPGSLAKKPESTTKR---SPSSKGTSEPEKSLRKGRPAL 1046
Query: 314 SEEEVDVVGDSSASKEQCK-----ENTNNELDTS-----LESMPASGEP--EPSPVLDCV 361
+ +E + S +S K + ++ D+S S PA +P E SP
Sbjct: 1047 ASQESSLSSTSPSSPLPVKVSLKPSRSRSKADSSSRGSGRHSSPAPAQPKKESSP----K 1102
Query: 362 SAQMMSLSEPQEHR----YTLRTSPRRAAPTRGSPTKNSSPYRENGQFEENNLSPNETNA 417
S +S PQ+ + T S A G T++ P ++ + + +
Sbjct: 1103 SQDSVSSPSPQKQKSASALTYTASSTSAKKASGPATRSPFPPGKSRTSDHSLSREGSRQS 1162
Query: 418 TVSDNVSQSPT---NPGEISQNEKG 439
SD S + T N +SQ G
Sbjct: 1163 LGSDRASATSTSKPNSPRVSQARAG 1187
>gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform 8
[Homo sapiens]
Length = 605
Score = 34.7 bits (78), Expect = 0.41
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 648 PETFNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASR 698
PE WT EE +++ +L+ KY P +RW IA L R KQ R
Sbjct: 88 PELIKGPWTKEEDQRVIELVQKYGP-----KRWSVIAKHLKGRIGKQCRER 133
>gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform 7
[Homo sapiens]
Length = 603
Score = 34.7 bits (78), Expect = 0.41
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 648 PETFNQLWTVEEQKKLEQLLIKYPPEEVESRRWQKIADELGNRTAKQVASR 698
PE WT EE +++ +L+ KY P +RW IA L R KQ R
Sbjct: 88 PELIKGPWTKEEDQRVIELVQKYGP-----KRWSVIAKHLKGRIGKQCRER 133
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,264,993
Number of Sequences: 37866
Number of extensions: 1935579
Number of successful extensions: 6691
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 215
Number of HSP's that attempted gapping in prelim test: 6383
Number of HSP's gapped (non-prelim): 530
length of query: 903
length of database: 18,247,518
effective HSP length: 111
effective length of query: 792
effective length of database: 14,044,392
effective search space: 11123158464
effective search space used: 11123158464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.