Guide to the Human Genome
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Name: MIB1 Sequence: fasta or formatted (1006aa) NCBI GI: 30348954
Description:

mindbomb homolog 1

Referenced in:

Ankyrin Family
Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         81           3
 C cysteine            4.2         42           2
 D aspartate           7.5         75           2
 E glutamate           5.2         52           2
 F phenylalanine       1.7         17           1
 G glycine             8.6         87           2
 H histidine           3.5         35           2
 I isoleucine          4.3         43           2
 K lysine              6.1         61           2
 L leucine             9.0         91           3
 M methionine          1.9         19           1
 N asparagine          4.9         49           3
 P proline             3.2         32           1
 Q glutamine           5.4         54           3
 R arginine            5.7         57           2
 S serine              5.8         58           2
 T threonine           4.5         45           3
 V valine              8.0         80           4
 W tryptophan          1.4         14           1
 Y tyrosine            1.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mindbomb homolog 1 
MIB2                  0.322   mindbomb homolog 2 
ANK3                  0.062   ankyrin 3 isoform 1 
ANK2                  0.058   ankyrin 2 isoform 2 
ANK2                  0.058   ankyrin 2 isoform 1 
ANK2                  0.057   ankyrin 2 isoform 3 
ANKRD28               0.056   ankyrin repeat domain 28 
ANK1                  0.055   ankyrin 1 isoform 9 
ANK1                  0.055   ankyrin 1 isoform 1 
ANK1                  0.055   ankyrin 1 isoform 3 
ANK1                  0.055   ankyrin 1 isoform 2 
ANK1                  0.055   ankyrin 1 isoform 4 
DAPK1                 0.054   death-associated protein kinase 1 
RIPK4                 0.053   ankyrin repeat domain 3 
ANKDD1A               0.052   ankyrin repeat and death domain containing 1A 
ANKRD44               0.049   ankyrin repeat domain 44 
ANKRD52               0.048   ankyrin repeat domain 52 
TNKS2                 0.048   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS                  0.047   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKK1                 0.047   ankyrin repeat and kinase domain containing 1 
ANKRD17               0.047   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.047   ankyrin repeat domain protein 17 isoform b 
KIDINS220             0.045   kinase D-interacting substrate of 220 kDa 
ANKHD1                0.044   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.044   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.044   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.044   ANKHD1-EIF4EBP3 protein 
ANKRD50               0.044   ankyrin repeat domain 50 
LOC441869             0.043   hypothetical protein LOC441869 
ANKS1B                0.042   cajalin 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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