Guide to the Human Genome
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Name: SRPK1 Sequence: fasta or formatted (655aa) NCBI GI: 47419936
Description:

SFRS protein kinase 1

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         35           2
 C cysteine            1.8         12           1
 D aspartate           5.3         35           3
 E glutamate          10.4         68           3
 F phenylalanine       2.4         16           2
 G glycine             5.6         37           2
 H histidine           3.2         21           2
 I isoleucine          5.3         35           2
 K lysine              9.2         60           4
 L leucine             8.9         58           2
 M methionine          1.8         12           1
 N asparagine          4.9         32           2
 P proline             4.9         32           3
 Q glutamine           5.6         37           2
 R arginine            4.1         27           2
 S serine              7.5         49           3
 T threonine           5.0         33           1
 V valine              4.9         32           2
 W tryptophan          1.5         10           1
 Y tyrosine            2.1         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SFRS protein kinase 1 
SRPK2                 0.578   serine/arginine-rich protein-specific kinase 2 isofo...
SRPK2                 0.567   serine/arginine-rich protein-specific kinase 2 isofo...
SRPK3                 0.290   serine arginine rich protein-specific kinase 3 [Homo...
DYRK2                 0.059   dual-specificity tyrosine-(Y)-phosphorylation regul...
DYRK2                 0.059   dual-specificity tyrosine-(Y)-phosphorylation regulat...
CLK1                  0.057   CDC-like kinase 1 isoform 2 
CLK1                  0.057   CDC-like kinase 1 isoform 1 
CLK3                  0.056   CDC-like kinase 3 isoform a 
CLK3                  0.056   CDC-like kinase 3 isoform b 
CLK2                  0.055   CDC-like kinase 2 
DYRK3                 0.054   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK3                 0.054   dual-specificity tyrosine-(Y)-phosphorylation regula...
CLK4                  0.051   CDC-like kinase 4 
DYRK4                 0.047   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1B                0.047   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.047   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.047   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1A                0.046   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.046   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.046   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.046   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.046   dual-specificity tyrosine-(Y)-phosphorylation regula...
PRPF4B                0.042   serine/threonine-protein kinase PRP4K 
HIPK1                 0.036   homeodomain-interacting protein kinase 1 isoform 1 [...
HIPK1                 0.036   homeodomain-interacting protein kinase 1 isoform 2 [...
HIPK2                 0.034   homeodomain interacting protein kinase 2 isoform 2 ...
HIPK2                 0.034   homeodomain interacting protein kinase 2 isoform 1 ...
LOC653052             0.034   PREDICTED: similar to homeodomain interacting prote...
CDK2                  0.034   cyclin-dependent kinase 2 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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