Guide to the Human Genome
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Name: DNAJC1 Sequence: fasta or formatted (554aa) NCBI GI: 21361912
Description:

DnaJ (Hsp40) homolog, subfamily C, member 1

Referenced in:

Heat-Shock Proteins and Chaperonins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         39           2
 C cysteine            1.1          6           1
 D aspartate           6.0         33           2
 E glutamate           9.7         54           3
 F phenylalanine       2.2         12           1
 G glycine             4.0         22           2
 H histidine           1.1          6           1
 I isoleucine          3.2         18           2
 K lysine              9.6         53           4
 L leucine            11.7         65           6
 M methionine          1.3          7           1
 N asparagine          2.0         11           1
 P proline             6.1         34           5
 Q glutamine           6.5         36           2
 R arginine            7.4         41           3
 S serine              6.0         33           2
 T threonine           5.8         32           2
 V valine              4.7         26           2
 W tryptophan          2.0         11           1
 Y tyrosine            2.7         15           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DnaJ (Hsp40) homolog, subfamily C, member 1 
DNAJC2                0.049   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ...
DNAJC2                0.049   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform...
DNAJB11               0.048   DnaJ (Hsp40) homolog, subfamily B, member 11 precurso...
DNAJC16               0.043   DnaJ (Hsp40) homolog, subfamily C, member 16 
DNAJB8                0.043   DnaJ homolog, subfamily B, member 8 
DNAJB4                0.042   DnaJ (Hsp40) homolog, subfamily B, member 4 
DNAJB6                0.041   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform ...
DNAJB6                0.041   DnaJ (Hsp40) homolog, subfamily B, member 6 isoform b...
DNAJB5                0.041   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.041   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform...
DNAJB5                0.041   DnaJ (Hsp40) homolog, subfamily B, member 5 isoform ...
DNAJC10               0.041   DnaJ (Hsp40) homolog, subfamily C, member 10 
DNAJB9                0.040   DnaJ (Hsp40) homolog, subfamily B, member 9 
DNAJB7                0.040   DnaJ (Hsp40) homolog, subfamily B, member 7 
DNAJB14               0.038   DnaJ (Hsp40) homolog, subfamily B, member 14 isoform...
DNAJC18               0.037   DnaJ (Hsp40) homolog, subfamily C, member 18 
DNAJC21               0.037   DnaJ homology subfamily A member 5 isoform 1 
DNAJC21               0.037   DnaJ homology subfamily A member 5 isoform 2 
DNAJB3                0.036   DnaJ (Hsp40) homolog, subfamily B, member 3 
DNAJB1                0.036   DnaJ (Hsp40) homolog, subfamily B, member 1 
DNAJA3                0.036   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA3                0.036   DnaJ (Hsp40) homolog, subfamily A, member 3 isoform...
DNAJA4                0.035   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJA4                0.035   DnaJ (Hsp40) homolog, subfamily A, member 4 isoform...
DNAJB12               0.034   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB12               0.034   DnaJ (Hsp40) homolog, subfamily B, member 12 
DNAJB2                0.034   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJB2                0.034   DnaJ (Hsp40) homolog, subfamily B, member 2 isoform ...
DNAJA1                0.034   DnaJ (Hsp40) homolog, subfamily A, member 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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