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Search of human proteins with 122937339
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|122937339 major facilitator superfamily domain-containing
protein 2b [Homo sapiens]
(497 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|122937339 major facilitator superfamily domain-containing pro... 996 0.0
gi|42713696 major facilitator superfamily domain containing 2 is... 385 e-107
gi|211063479 major facilitator superfamily domain containing 2 i... 376 e-104
gi|111378391 hypothetical protein LOC126321 isoform c [Homo sapi... 70 4e-12
gi|111378395 hypothetical protein LOC126321 isoform b [Homo sapi... 70 4e-12
gi|111378386 hypothetical protein LOC126321 isoform a [Homo sapi... 70 4e-12
gi|21553331 solute carrier family 2 (facilitated glucose transpo... 36 0.092
gi|71043876 undifferentiated embryonic cell transcription factor... 35 0.16
gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo ... 35 0.21
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 34 0.27
gi|31542493 D site of albumin promoter (albumin D-box) binding p... 34 0.35
gi|87299628 biorientation of chromosomes in cell division 1-like... 33 0.78
gi|41152235 ubiquitin specific protease 51 [Homo sapiens] 33 0.78
gi|188536004 zinc finger protein 469 [Homo sapiens] 32 1.0
gi|122937233 discs, large (Drosophila) homolog-associated protei... 32 1.0
gi|24475863 H1 histone family, member O, oocyte-specific [Homo s... 32 1.0
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 32 1.3
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 32 1.3
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 32 1.3
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 32 1.3
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 32 1.3
gi|95147559 ankyrin repeat domain 43 [Homo sapiens] 32 1.3
gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a... 32 1.3
gi|112421108 capicua homolog [Homo sapiens] 32 1.7
gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens] 32 1.7
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ... 32 1.7
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 31 2.3
gi|239743289 PREDICTED: hypothetical protein XP_002342818 [Homo ... 31 2.3
gi|4758392 forkhead box D1 [Homo sapiens] 31 2.3
gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens] 31 3.0
>gi|122937339 major facilitator superfamily domain-containing
protein 2b [Homo sapiens]
Length = 497
Score = 996 bits (2575), Expect = 0.0
Identities = 497/497 (100%), Positives = 497/497 (100%)
Query: 1 MAAPPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSA 60
MAAPPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSA
Sbjct: 1 MAAPPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSA 60
Query: 61 TAFYLQLFLLDIAQIPAAQVSLVLFGGKVSGAAADPVAGFFINRSQRTGSGRLMPWVLGC 120
TAFYLQLFLLDIAQIPAAQVSLVLFGGKVSGAAADPVAGFFINRSQRTGSGRLMPWVLGC
Sbjct: 61 TAFYLQLFLLDIAQIPAAQVSLVLFGGKVSGAAADPVAGFFINRSQRTGSGRLMPWVLGC 120
Query: 121 TPFIALAYFFLWFLPPFTSLRGLWYTTFYCLFQALATFFQVPYTALTMLLTPCPRERDSA 180
TPFIALAYFFLWFLPPFTSLRGLWYTTFYCLFQALATFFQVPYTALTMLLTPCPRERDSA
Sbjct: 121 TPFIALAYFFLWFLPPFTSLRGLWYTTFYCLFQALATFFQVPYTALTMLLTPCPRERDSA 180
Query: 181 TAYRMTVEMAGTLMGATVHGLIVSGAHRPHRCEATATPGPVTVSPNAAHLYCIAAAVVVV 240
TAYRMTVEMAGTLMGATVHGLIVSGAHRPHRCEATATPGPVTVSPNAAHLYCIAAAVVVV
Sbjct: 181 TAYRMTVEMAGTLMGATVHGLIVSGAHRPHRCEATATPGPVTVSPNAAHLYCIAAAVVVV 240
Query: 241 TYPVCISLLCLGVKERPDPSAPASGPGLSFLAGLSLTTRHPPYLKLVISFLFISAAVQVE 300
TYPVCISLLCLGVKERPDPSAPASGPGLSFLAGLSLTTRHPPYLKLVISFLFISAAVQVE
Sbjct: 241 TYPVCISLLCLGVKERPDPSAPASGPGLSFLAGLSLTTRHPPYLKLVISFLFISAAVQVE 300
Query: 301 QSYLVLFCTHASQLHDHVQGLVLTVLVSAVLSTPLWEWVLQRFGKKTSAFGIFAMVPFAI 360
QSYLVLFCTHASQLHDHVQGLVLTVLVSAVLSTPLWEWVLQRFGKKTSAFGIFAMVPFAI
Sbjct: 301 QSYLVLFCTHASQLHDHVQGLVLTVLVSAVLSTPLWEWVLQRFGKKTSAFGIFAMVPFAI 360
Query: 361 LLAAVPTAPVAYVVAFVSGVSIAVSLLLPWSMLPDVVDDFQLQHRHGPGLETIFYSSYVF 420
LLAAVPTAPVAYVVAFVSGVSIAVSLLLPWSMLPDVVDDFQLQHRHGPGLETIFYSSYVF
Sbjct: 361 LLAAVPTAPVAYVVAFVSGVSIAVSLLLPWSMLPDVVDDFQLQHRHGPGLETIFYSSYVF 420
Query: 421 FTKLSGACALGISTLSLEFSGYKAGVCKQAEEVVVTLKVLIGAVPTCMILAGLCILMVGS 480
FTKLSGACALGISTLSLEFSGYKAGVCKQAEEVVVTLKVLIGAVPTCMILAGLCILMVGS
Sbjct: 421 FTKLSGACALGISTLSLEFSGYKAGVCKQAEEVVVTLKVLIGAVPTCMILAGLCILMVGS 480
Query: 481 TPKTPSRDASSRLSLRR 497
TPKTPSRDASSRLSLRR
Sbjct: 481 TPKTPSRDASSRLSLRR 497
>gi|42713696 major facilitator superfamily domain containing 2
isoform 2 [Homo sapiens]
Length = 530
Score = 385 bits (990), Expect = e-107
Identities = 197/451 (43%), Positives = 274/451 (60%), Gaps = 15/451 (3%)
Query: 38 RLSFCTKVCYGIGGVPNQIASSATAFYLQLFLLDIAQIPAAQVSLVLFGGKVSGAAADPV 97
+LS C K+CY +GG P Q+ A F+LQ++LLD+AQ+ S++LF G+ A DP+
Sbjct: 40 QLSVCNKLCYALGGAPYQVTGCALGFFLQIYLLDVAQVGPFSASIILFVGRAWDAITDPL 99
Query: 98 AGFFINRSQRTGSGRLMPWVLGCTPFIALAYFFLWFLPPFTSLRGLWYTTFYCLFQALAT 157
G I++S T GRLMPW++ TP +AYF +WF+P F + WY FYCLF+ + T
Sbjct: 100 VGLCISKSPWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYWYLLFYCLFETMVT 159
Query: 158 FFQVPYTALTMLLTPCPRERDSATAYRMTVEMAGTLMGATVHGLIVSGAHRPHRCEATAT 217
F VPY+ALTM ++ ERDSATAYRMTVE+ GT++G + G IV A P C
Sbjct: 160 CFHVPYSALTMFISTEQTERDSATAYRMTVEVLGTVLGTAIQGQIVGQADTP--CFQDLN 217
Query: 218 PGPV-TVSPNAAH----------LYCIAAAVVVVTYPVCISLLCLGVKERPDPSAPASGP 266
V + S N H Y +AA V+V Y +C +L LGV+E+ +P
Sbjct: 218 SSTVASQSANHTHGTTSHRETQKAYLLAAGVIVCIYIICAVILILGVREQREPYEAQQSE 277
Query: 267 GLSFLAGLSLTTRHPPYLKLVISFLFISAAVQVEQSYLVLFCTHASQLHDHVQGLVLTVL 326
+++ GL L H PY+KL+ FLF S A + + VLFCT+ + Q L+L ++
Sbjct: 278 PIAYFRGLRLVMSHGPYIKLITGFLFTSLAFMLVEGNFVLFCTYTLGFRNEFQNLLLAIM 337
Query: 327 VSAVLSTPLWEWVLQRFGKKTSAF-GIFAMVPFAILLAAVPT-APVAYVVAFVSGVSIAV 384
+SA L+ P+W+W L RFGKKT+ + GI + VPF IL+A + + + Y VA +G+S+A
Sbjct: 338 LSATLTIPIWQWFLTRFGKKTAVYVGISSAVPFLILVALMESNLIITYAVAVAAGISVAA 397
Query: 385 SLLLPWSMLPDVVDDFQLQHRHGPGLETIFYSSYVFFTKLSGACALGISTLSLEFSGYKA 444
+ LLPWSMLPDV+DDF L+ H G E IF+S YVFFTK + +LGISTLSL+F+GY+
Sbjct: 398 AFLLPWSMLPDVIDDFHLKQPHFHGTEPIFFSFYVFFTKFASGVSLGISTLSLDFAGYQT 457
Query: 445 GVCKQAEEVVVTLKVLIGAVPTCMILAGLCI 475
C Q E V TL +L+ P +IL GL +
Sbjct: 458 RGCSQPERVKFTLNMLVTMAPIVLILLGLLL 488
>gi|211063479 major facilitator superfamily domain containing 2
isoform 1 [Homo sapiens]
Length = 543
Score = 376 bits (966), Expect = e-104
Identities = 197/464 (42%), Positives = 274/464 (59%), Gaps = 28/464 (6%)
Query: 38 RLSFCTKVCYGIGGVPNQIASSATAFYLQLFLLDIAQ-------------IPAAQVSLVL 84
+LS C K+CY +GG P Q+ A F+LQ++LLD+AQ + S++L
Sbjct: 40 QLSVCNKLCYALGGAPYQVTGCALGFFLQIYLLDVAQKDEEVVFCFSSFQVGPFSASIIL 99
Query: 85 FGGKVSGAAADPVAGFFINRSQRTGSGRLMPWVLGCTPFIALAYFFLWFLPPFTSLRGLW 144
F G+ A DP+ G I++S T GRLMPW++ TP +AYF +WF+P F + W
Sbjct: 100 FVGRAWDAITDPLVGLCISKSPWTCLGRLMPWIIFSTPLAVIAYFLIWFVPDFPHGQTYW 159
Query: 145 YTTFYCLFQALATFFQVPYTALTMLLTPCPRERDSATAYRMTVEMAGTLMGATVHGLIVS 204
Y FYCLF+ + T F VPY+ALTM ++ ERDSATAYRMTVE+ GT++G + G IV
Sbjct: 160 YLLFYCLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVEVLGTVLGTAIQGQIVG 219
Query: 205 GAHRPHRCEATATPGPV-TVSPNAAH----------LYCIAAAVVVVTYPVCISLLCLGV 253
A P C V + S N H Y +AA V+V Y +C +L LGV
Sbjct: 220 QADTP--CFQDLNSSTVASQSANHTHGTTSHRETQKAYLLAAGVIVCIYIICAVILILGV 277
Query: 254 KERPDPSAPASGPGLSFLAGLSLTTRHPPYLKLVISFLFISAAVQVEQSYLVLFCTHASQ 313
+E+ +P +++ GL L H PY+KL+ FLF S A + + VLFCT+
Sbjct: 278 REQREPYEAQQSEPIAYFRGLRLVMSHGPYIKLITGFLFTSLAFMLVEGNFVLFCTYTLG 337
Query: 314 LHDHVQGLVLTVLVSAVLSTPLWEWVLQRFGKKTSAF-GIFAMVPFAILLAAVPT-APVA 371
+ Q L+L +++SA L+ P+W+W L RFGKKT+ + GI + VPF IL+A + + +
Sbjct: 338 FRNEFQNLLLAIMLSATLTIPIWQWFLTRFGKKTAVYVGISSAVPFLILVALMESNLIIT 397
Query: 372 YVVAFVSGVSIAVSLLLPWSMLPDVVDDFQLQHRHGPGLETIFYSSYVFFTKLSGACALG 431
Y VA +G+S+A + LLPWSMLPDV+DDF L+ H G E IF+S YVFFTK + +LG
Sbjct: 398 YAVAVAAGISVAAAFLLPWSMLPDVIDDFHLKQPHFHGTEPIFFSFYVFFTKFASGVSLG 457
Query: 432 ISTLSLEFSGYKAGVCKQAEEVVVTLKVLIGAVPTCMILAGLCI 475
ISTLSL+F+GY+ C Q E V TL +L+ P +IL GL +
Sbjct: 458 ISTLSLDFAGYQTRGCSQPERVKFTLNMLVTMAPIVLILLGLLL 501
>gi|111378391 hypothetical protein LOC126321 isoform c [Homo
sapiens]
Length = 480
Score = 70.1 bits (170), Expect = 4e-12
Identities = 100/452 (22%), Positives = 177/452 (39%), Gaps = 59/452 (13%)
Query: 4 PPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSATAF 63
P PAA +P P P LS ++ Y +G N + +S
Sbjct: 3 PGPPAAGAAPSPRP---------------------LSLVARLSYAVGHFLNDLCASMWFT 41
Query: 64 YLQLFLLDIAQIPAAQVSLVLFGGKVSGAAADPVAGFFINRSQRTGS--GRLMPWVLGCT 121
YL L+L + + L+L G+V+ P+ G+ +R+ + G W L T
Sbjct: 42 YLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVGYEADRAASCCARYGPRKAWHLVGT 101
Query: 122 PFIALAYFFLW--------FLPPFTSLRGLWYTTFYCLFQALATFFQVPYTALTMLLTPC 173
+ L++ F++ P + +L L+Y F +FQ Q+ + +L L
Sbjct: 102 VCVLLSFPFIFSPCLGCGAATPEWAAL--LYYGPFIVIFQFGWASTQISHLSLIPELVTN 159
Query: 174 PRERDSATA--YRMTVEMAGTLMGATVHGLIVSGAHRPHRCEATATPGPVTVSPNAAHLY 231
E+ TA Y TV T+ GA L + G+ R + + + ++
Sbjct: 160 DHEKVELTALRYAFTVVANITVYGAAWLLLHLQGSSRVEPTQDISISD--QLGGQDVPVF 217
Query: 232 CIAAAVVVVTYPVCISLLCLGVKERPDPSAPASGPGLSFLAGLSLT--------TRHPPY 283
+ +VV V L LG +ER P A G LA + R P +
Sbjct: 218 RNLSLLVVGVGAVFSLLFHLGTRERRRPHAEEPGEHTPLLAPATAQPLLLWKHWLREPAF 277
Query: 284 LKLVISFLFISAAVQVEQSYLVLFCTHASQL-HDHVQGLVLTVLVSAVLSTPLWEWVLQR 342
++ I ++ V + Q+Y+ ++ T++ L + + L + +S LS+ L + + +
Sbjct: 278 YQVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKC 337
Query: 343 FGKKTSAF-GIFAMVPFAILLAAVPTAPVA-YVVAFVSGVSIAVSLLLPWSMLPDVVDDF 400
G+ + F G+ ++ FA +A VA Y A + G A L+ +M D++
Sbjct: 338 IGRNMTYFSGLLVILAFAAWVALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLI--- 394
Query: 401 QLQHRHGPGLET--IFYSSYVFFTKLSGACAL 430
GP + Y S F K++ A+
Sbjct: 395 ------GPHTNSGAFVYGSMSFLDKVANGLAV 420
>gi|111378395 hypothetical protein LOC126321 isoform b [Homo
sapiens]
Length = 473
Score = 70.1 bits (170), Expect = 4e-12
Identities = 100/452 (22%), Positives = 177/452 (39%), Gaps = 59/452 (13%)
Query: 4 PPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSATAF 63
P PAA +P P P LS ++ Y +G N + +S
Sbjct: 3 PGPPAAGAAPSPRP---------------------LSLVARLSYAVGHFLNDLCASMWFT 41
Query: 64 YLQLFLLDIAQIPAAQVSLVLFGGKVSGAAADPVAGFFINRSQRTGS--GRLMPWVLGCT 121
YL L+L + + L+L G+V+ P+ G+ +R+ + G W L T
Sbjct: 42 YLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVGYEADRAASCCARYGPRKAWHLVGT 101
Query: 122 PFIALAYFFLW--------FLPPFTSLRGLWYTTFYCLFQALATFFQVPYTALTMLLTPC 173
+ L++ F++ P + +L L+Y F +FQ Q+ + +L L
Sbjct: 102 VCVLLSFPFIFSPCLGCGAATPEWAAL--LYYGPFIVIFQFGWASTQISHLSLIPELVTN 159
Query: 174 PRERDSATA--YRMTVEMAGTLMGATVHGLIVSGAHRPHRCEATATPGPVTVSPNAAHLY 231
E+ TA Y TV T+ GA L + G+ R + + + ++
Sbjct: 160 DHEKVELTALRYAFTVVANITVYGAAWLLLHLQGSSRVEPTQDISISD--QLGGQDVPVF 217
Query: 232 CIAAAVVVVTYPVCISLLCLGVKERPDPSAPASGPGLSFLAGLSLT--------TRHPPY 283
+ +VV V L LG +ER P A G LA + R P +
Sbjct: 218 RNLSLLVVGVGAVFSLLFHLGTRERRRPHAEEPGEHTPLLAPATAQPLLLWKHWLREPAF 277
Query: 284 LKLVISFLFISAAVQVEQSYLVLFCTHASQL-HDHVQGLVLTVLVSAVLSTPLWEWVLQR 342
++ I ++ V + Q+Y+ ++ T++ L + + L + +S LS+ L + + +
Sbjct: 278 YQVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKC 337
Query: 343 FGKKTSAF-GIFAMVPFAILLAAVPTAPVA-YVVAFVSGVSIAVSLLLPWSMLPDVVDDF 400
G+ + F G+ ++ FA +A VA Y A + G A L+ +M D++
Sbjct: 338 IGRNMTYFSGLLVILAFAAWVALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLI--- 394
Query: 401 QLQHRHGPGLET--IFYSSYVFFTKLSGACAL 430
GP + Y S F K++ A+
Sbjct: 395 ------GPHTNSGAFVYGSMSFLDKVANGLAV 420
>gi|111378386 hypothetical protein LOC126321 isoform a [Homo
sapiens]
Length = 538
Score = 70.1 bits (170), Expect = 4e-12
Identities = 100/452 (22%), Positives = 177/452 (39%), Gaps = 59/452 (13%)
Query: 4 PPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSATAF 63
P PAA +P P P LS ++ Y +G N + +S
Sbjct: 3 PGPPAAGAAPSPRP---------------------LSLVARLSYAVGHFLNDLCASMWFT 41
Query: 64 YLQLFLLDIAQIPAAQVSLVLFGGKVSGAAADPVAGFFINRSQRTGS--GRLMPWVLGCT 121
YL L+L + + L+L G+V+ P+ G+ +R+ + G W L T
Sbjct: 42 YLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVGYEADRAASCCARYGPRKAWHLVGT 101
Query: 122 PFIALAYFFLW--------FLPPFTSLRGLWYTTFYCLFQALATFFQVPYTALTMLLTPC 173
+ L++ F++ P + +L L+Y F +FQ Q+ + +L L
Sbjct: 102 VCVLLSFPFIFSPCLGCGAATPEWAAL--LYYGPFIVIFQFGWASTQISHLSLIPELVTN 159
Query: 174 PRERDSATA--YRMTVEMAGTLMGATVHGLIVSGAHRPHRCEATATPGPVTVSPNAAHLY 231
E+ TA Y TV T+ GA L + G+ R + + + ++
Sbjct: 160 DHEKVELTALRYAFTVVANITVYGAAWLLLHLQGSSRVEPTQDISISD--QLGGQDVPVF 217
Query: 232 CIAAAVVVVTYPVCISLLCLGVKERPDPSAPASGPGLSFLAGLSLT--------TRHPPY 283
+ +VV V L LG +ER P A G LA + R P +
Sbjct: 218 RNLSLLVVGVGAVFSLLFHLGTRERRRPHAEEPGEHTPLLAPATAQPLLLWKHWLREPAF 277
Query: 284 LKLVISFLFISAAVQVEQSYLVLFCTHASQL-HDHVQGLVLTVLVSAVLSTPLWEWVLQR 342
++ I ++ V + Q+Y+ ++ T++ L + + L + +S LS+ L + + +
Sbjct: 278 YQVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKC 337
Query: 343 FGKKTSAF-GIFAMVPFAILLAAVPTAPVA-YVVAFVSGVSIAVSLLLPWSMLPDVVDDF 400
G+ + F G+ ++ FA +A VA Y A + G A L+ +M D++
Sbjct: 338 IGRNMTYFSGLLVILAFAAWVALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLI--- 394
Query: 401 QLQHRHGPGLET--IFYSSYVFFTKLSGACAL 430
GP + Y S F K++ A+
Sbjct: 395 ------GPHTNSGAFVYGSMSFLDKVANGLAV 420
>gi|21553331 solute carrier family 2 (facilitated glucose
transporter), member 12 [Homo sapiens]
Length = 617
Score = 35.8 bits (81), Expect = 0.092
Identities = 46/196 (23%), Positives = 74/196 (37%), Gaps = 31/196 (15%)
Query: 259 PSAPASGPGLSFLAGLSLTT-----RHPPYLKLVISFLFISAAVQVEQSYLV-------- 305
P GP L G ++ T RHPP+ + F F+S+ LV
Sbjct: 3 PVENTEGPSLLNQKGTAVETEGSGSRHPPWARGCGMFTFLSSVTAAVSGLLVGYELGIIS 62
Query: 306 ---LFCTHASQLHDHVQGLVLTVLVSAVLSTPLWEWVL-QRFGKKTSAFGIFAMVPFAIL 361
L L H Q +V++ LV L L VL R+G++T+ ++ L
Sbjct: 63 GALLQIKTLLALSCHEQEMVVSSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSL 122
Query: 362 LAAVPTAPVAYVVAFVSGVSIAVSLLLPWSMLPDVVDDFQLQHRHG-----------PGL 410
+ + ++Y V V ++I VS+ L + + QHR G G+
Sbjct: 123 VLIL---SLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGI 179
Query: 411 ETIFYSSYVFFTKLSG 426
+ + S+Y F G
Sbjct: 180 LSAYISNYAFANVFHG 195
>gi|71043876 undifferentiated embryonic cell transcription factor
1 [Homo sapiens]
Length = 341
Score = 35.0 bits (79), Expect = 0.16
Identities = 14/27 (51%), Positives = 16/27 (59%)
Query: 3 APPAPAAKGSPQPEPHAPEPGPGSAKR 29
APPAP + SP PEP P PG+ R
Sbjct: 12 APPAPPSPASPDPEPRTPGDAPGTPPR 38
>gi|239749209 PREDICTED: hypothetical protein XP_002346954 [Homo
sapiens]
Length = 262
Score = 34.7 bits (78), Expect = 0.21
Identities = 32/111 (28%), Positives = 41/111 (36%), Gaps = 2/111 (1%)
Query: 4 PPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSA-TA 62
PP S P AP P P S +R R A R C++ C G+ + A
Sbjct: 28 PPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA-REGVCSRHCGGLMAAGQAARTPVPDA 86
Query: 63 FYLQLFLLDIAQIPAAQVSLVLFGGKVSGAAADPVAGFFINRSQRTGSGRL 113
Q + D Q PAA S ++ G + D A R G GRL
Sbjct: 87 DRRQSAVTDATQRPAAAESSPVWTGLLQRGPHDRGACGNTARRLLPGGGRL 137
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 34.3 bits (77), Expect = 0.27
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 4 PPAPAAKGSPQPEPHAPEPGPGSA 27
PPAP + P P P AP PGPG A
Sbjct: 27 PPAPPQQQPPPPPPPAPPPGPGPA 50
>gi|31542493 D site of albumin promoter (albumin D-box) binding
protein [Homo sapiens]
Length = 325
Score = 33.9 bits (76), Expect = 0.35
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 5/39 (12%)
Query: 4 PPAPAAKGSPQPEPH-----APEPGPGSAKRGREDSRAG 37
PP+P G P PEP AP PGPGS S G
Sbjct: 129 PPSPPPPGGPSPEPSPARTPAPSPGPGSCGSASPRSSPG 167
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 32.7 bits (73), Expect = 0.78
Identities = 15/35 (42%), Positives = 17/35 (48%)
Query: 3 APPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAG 37
APP P + PQP P P PG G G + AG
Sbjct: 13 APPPPPPQPQPQPPPPPPGPGAGPGAGGAGGAGAG 47
Score = 30.0 bits (66), Expect = 5.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 4 PPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAG 37
PP P + P P P P GPG+ G + AG
Sbjct: 16 PPPPQPQPQPPPPPPGPGAGPGAGGAGGAGAGAG 49
>gi|41152235 ubiquitin specific protease 51 [Homo sapiens]
Length = 711
Score = 32.7 bits (73), Expect = 0.78
Identities = 17/47 (36%), Positives = 20/47 (42%)
Query: 2 AAPPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCTKVCYG 48
A PP PA P P P P P P + + R SR G + C G
Sbjct: 122 APPPPPARPPPPPPPPPPPAPRPRAWRGSRRRSRPGSRPQTRRSCSG 168
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 32.3 bits (72), Expect = 1.0
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 2 AAPPAPAAKGSPQPEPHAPEPGP-GSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSA 60
A PP PAA P+P P PG G RGR +R+ L+ P+Q
Sbjct: 897 APPPLPAAT----PDPQTPRPGDRGCPARGRPKTRSLGLAPTE------ADAPSQGRQQR 946
Query: 61 TAFYLQLFLLDIAQIPAAQVSLVLFGGKVSG 91
L+LF D+ AA+ S GG+ SG
Sbjct: 947 RGKQLKLFRKDLDSGGAAEGSGSGGGGRASG 977
>gi|122937233 discs, large (Drosophila) homolog-associated protein 3
[Homo sapiens]
Length = 979
Score = 32.3 bits (72), Expect = 1.0
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 7 PAAKGSPQPEPHAPEPGPGSAKRGREDSRAGR 38
PA GSP P P AP PGPG+ +R R R
Sbjct: 750 PATDGSPGPAP-APTPGPGAGRRDSWIERGSR 780
>gi|24475863 H1 histone family, member O, oocyte-specific [Homo
sapiens]
Length = 346
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Query: 255 ERPDPSAPASGPGLSFLAGLSLTTRHPPYLKLVISFLFISAAVQVEQSYLVLFCTHASQL 314
E+P PS PG + L + RHPP L++V+ L A Q + + +
Sbjct: 27 EKPGPSHGGVPPGGPSHSSLPVGRRHPPVLRMVLEAL--QAGEQRRGTSVAAIKLYILHK 84
Query: 315 HDHVQGLVLTVLVSAVLSTPLWEWVLQR--FGKKTSAFGIFAMVP 357
+ V L L+ L+T + +L R K A G F +VP
Sbjct: 85 YPTVDVLRFKYLLKQALATGMRRGLLARPLNSKARGATGSFKLVP 129
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 32.0 bits (71), Expect = 1.3
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 2 AAPPAPAAKGSPQPEPHAPEPGP-GSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSA 60
A PAPA +P P P AP+ P SA++G + G+ ++ GI G P ++A
Sbjct: 188 APAPAPAPAPAPAPAP-APDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAA 246
Query: 61 TA 62
+A
Sbjct: 247 SA 248
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 32.0 bits (71), Expect = 1.3
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 2 AAPPAPAAKGSPQPEPHAPEPGP-GSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSA 60
A PAPA +P P P AP+ P SA++G + G+ ++ GI G P ++A
Sbjct: 188 APAPAPAPAPAPAPAP-APDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAA 246
Query: 61 TA 62
+A
Sbjct: 247 SA 248
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 32.0 bits (71), Expect = 1.3
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 2 AAPPAPAAKGSPQPEPHAPEPGP-GSAKRGREDSRAGRLSFCTKVCYGIGGVPNQIASSA 60
A PAPA +P P P AP+ P SA++G + G+ ++ GI G P ++A
Sbjct: 199 APAPAPAPAPAPAPAP-APDAAPQESAEQGANQGQRGQEPLADQLHSGISGRPAAGTAAA 257
Query: 61 TA 62
+A
Sbjct: 258 SA 259
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sapiens]
Length = 2462
Score = 32.0 bits (71), Expect = 1.3
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 3 APPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRA 36
APPAP + QPE AP+ PGS+ RG+ S A
Sbjct: 978 APPAPPPPQNLQPESDAPQQ-PGSSPRGKSRSPA 1010
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sapiens]
Length = 2524
Score = 32.0 bits (71), Expect = 1.3
Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 3 APPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRA 36
APPAP + QPE AP+ PGS+ RG+ S A
Sbjct: 994 APPAPPPPQNLQPESDAPQQ-PGSSPRGKSRSPA 1026
>gi|95147559 ankyrin repeat domain 43 [Homo sapiens]
Length = 549
Score = 32.0 bits (71), Expect = 1.3
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Query: 2 AAPP--APAAKGSPQPEPHAPEPGPGSAK 28
AAPP AP+ SP +P EPGPG+AK
Sbjct: 181 AAPPPRAPSEAASPCSDPPDAEPGPGAAK 209
>gi|110225353 sprouty-related, EVH1 domain containing 3 isoform a
[Homo sapiens]
Length = 410
Score = 32.0 bits (71), Expect = 1.3
Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 2 AAPPAPAAKGSPQPEPHAPEPGPG----SAKRGREDSRAGRLSFC 42
AA PAP + +P P P PGPG AK E A R C
Sbjct: 256 AALPAPLTEAAPPAPPARPPPGPGPSSAPAKASPEAEEAARCVHC 300
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 31.6 bits (70), Expect = 1.7
Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Query: 2 AAPPAPAAKGSPQPEPHAPEPGPGSAKRGR 31
+ P P +G+PQP P P PGP +A GR
Sbjct: 1581 SGPGQPGWEGAPQPSP--PPPGPSTAATGR 1608
>gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens]
Length = 334
Score = 31.6 bits (70), Expect = 1.7
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 2 AAPPAPAAKGSPQPEPHAPEPGPGSAKRGREDS---RAGRLSFCTKVCYGIGGVPNQIAS 58
AA P PA SP P PGPG A G + AG F V +G V ++++S
Sbjct: 231 AAAPGPAGAASPHPPAVGGAPGPGPAGPGGLHAGAPAAGHSLFSLPVPSLLGSVASRLSS 290
Query: 59 S 59
+
Sbjct: 291 A 291
>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
[Homo sapiens]
Length = 1008
Score = 31.6 bits (70), Expect = 1.7
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 10 KGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCT 43
K SP P H P+ PG R R S AG + C+
Sbjct: 51 KASPAPPRHTPDQSPGMESRHRSPSGAGEGASCS 84
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 31.2 bits (69), Expect = 2.3
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 4 PPAPAAKGSPQPEPHAPEPGPGSAKRG 30
PP P A G P P P P P P S+ G
Sbjct: 383 PPPPGAGGPPMPPPPPPPPPPPSSGNG 409
>gi|239743289 PREDICTED: hypothetical protein XP_002342818 [Homo
sapiens]
Length = 104
Score = 31.2 bits (69), Expect = 2.3
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 4 PPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCTKVCYGI 49
PP S P AP P P S +R R A R C++ C G+
Sbjct: 28 PPRTVTSSSASSRPSAPTPPPRSQRRRRRSGEA-REGVCSRHCGGL 72
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 31.2 bits (69), Expect = 2.3
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 2 AAPPAPAAKGSPQPEPHAPEPGPGSAKRG 30
AA A AA+ SP P P A P PGS+ G
Sbjct: 381 AAQAAAAAQASPSPSPVAAPPAPGSSGGG 409
>gi|38093637 Nance-Horan syndrome protein isoform 1 [Homo sapiens]
Length = 1630
Score = 30.8 bits (68), Expect = 3.0
Identities = 27/87 (31%), Positives = 34/87 (39%), Gaps = 13/87 (14%)
Query: 3 APPAPAAKGSPQPEPHAPEPGPGSAKRGREDSRAGRLSFCTKVCYGIGGVPNQI-----A 57
A PA G P P P P P + E S AG S G+P A
Sbjct: 58 ARAVPAPSGLPPPPPPLPAPADQTQPPHGEASVAGEES--------TAGIPEAAPAAGEA 109
Query: 58 SSATAFYLQLFLLDIAQIPAAQVSLVL 84
SSA A L +LD+ + A ++ VL
Sbjct: 110 SSAAAAAAVLLMLDLCAVSNAALARVL 136
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.138 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,321,680
Number of Sequences: 37866
Number of extensions: 965939
Number of successful extensions: 8079
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 7870
Number of HSP's gapped (non-prelim): 239
length of query: 497
length of database: 18,247,518
effective HSP length: 106
effective length of query: 391
effective length of database: 14,233,722
effective search space: 5565385302
effective search space used: 5565385302
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.