VAX1 6572

Name: VAX1	Sequence: fasta or formatted (334aa)		NCBI GI: 162951873
Description: ventral anterior homeobox 1 isoform a		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [186aa] ventral anterior homeobox 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 15.9 53 8 C cysteine 1.8 6 1 D aspartate 3.6 12 1 E glutamate 6.0 20 1 F phenylalanine 2.4 8 1 G glycine 9.6 32 2 H histidine 1.5 5 1 I isoleucine 1.2 4 2 K lysine 5.7 19 2 L leucine 10.8 36 2 M methionine 1.2 4 1 N asparagine 2.7 9 2 P proline 8.1 27 2 Q glutamine 3.3 11 1 R arginine 7.2 24 2 S serine 10.2 34 3 T threonine 3.3 11 1 V valine 3.9 13 2 W tryptophan 0.3 1 1 Y tyrosine 1.5 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 ventral anterior homeobox 1 isoform a VAX1 0.420 ventral anterior homeobox 1 isoform b VAX2 0.312 ventral anterior homeobox 2 BARHL1 0.098 BarH-like homeobox 1 NKX2-3 0.098 NK2 transcription factor related, locus 3 EVX2 0.096 even-skipped homeobox 2 ARX 0.096 aristaless related homeobox EMX1 0.088 empty spiracles homolog 1 EMX2 0.087 empty spiracles homeobox 2 VENTX 0.087 VENT homeobox NKX1-1 0.084 PREDICTED: HPX-153 homeobox NKX1-1 0.082 PREDICTED: NK1 homeobox 1 HMX1 0.082 homeo box (H6 family) 1 PHOX2B 0.082 paired-like homeobox 2b NKX1-1 0.080 PREDICTED: NK1 homeobox 1 EN1 0.080 engrailed homeobox 1 EN2 0.080 engrailed homeobox 2 EVX1 0.080 even-skipped homeobox 1 PITX3 0.079 paired-like homeodomain 3 HOXD3 0.079 homeobox D3 HOXA3 0.077 homeobox A3 isoform b HOXA3 0.077 homeobox A3 isoform a HOXA3 0.077 homeobox A3 isoform a MSX1 0.076 msh homeobox 1 HOXD4 0.076 homeobox D4 HOXB3 0.076 homeobox B3 NKX3-2 0.076 NK3 homeobox 2 NKX1-2 0.074 NK1 homeobox 2 PDX1 0.074 pancreatic and duodenal homeobox 1 NKX1-2 0.074 PREDICTED: NK1 homeobox 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.