BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|122692281 hypothetical protein LOC645369 [Homo sapiens] (621 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|122692281 hypothetical protein LOC645369 [Homo sapiens] 1226 0.0 gi|29789291 transmembrane protein 200A [Homo sapiens] 119 8e-27 gi|51242137 transmembrane protein 200B [Homo sapiens] 74 5e-13 gi|153070260 myristoylated alanine-rich protein kinase C substra... 72 2e-12 gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 60 6e-09 gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 59 1e-08 gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 57 7e-08 gi|110832843 TBP-associated factor 4 [Homo sapiens] 57 7e-08 gi|33188461 GATA binding protein 4 [Homo sapiens] 56 9e-08 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 56 9e-08 gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 55 1e-07 gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 55 1e-07 gi|18702331 OTU domain containing 7A [Homo sapiens] 55 1e-07 gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 55 3e-07 gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 54 3e-07 gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 54 3e-07 gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 53 7e-07 gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] 53 7e-07 gi|102469037 jun D proto-oncogene [Homo sapiens] 53 1e-06 gi|163965366 nascent polypeptide-associated complex alpha subuni... 53 1e-06 gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 52 2e-06 gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 52 2e-06 gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 52 2e-06 gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 51 3e-06 gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 51 3e-06 gi|123701326 zinc finger protein 831 [Homo sapiens] 51 4e-06 gi|48762934 alpha 2 type I collagen [Homo sapiens] 50 5e-06 gi|117938759 GNAS complex locus XLas [Homo sapiens] 50 5e-06 gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 50 6e-06 gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 50 6e-06 >gi|122692281 hypothetical protein LOC645369 [Homo sapiens] Length = 621 Score = 1226 bits (3171), Expect = 0.0 Identities = 621/621 (100%), Positives = 621/621 (100%) Query: 1 MIATGGLLRISARKQDPLRPPSQIPKRKRKAKKRRKNDVVVVKGKLKLCSISGLIALCGI 60 MIATGGLLRISARKQDPLRPPSQIPKRKRKAKKRRKNDVVVVKGKLKLCSISGLIALCGI Sbjct: 1 MIATGGLLRISARKQDPLRPPSQIPKRKRKAKKRRKNDVVVVKGKLKLCSISGLIALCGI 60 Query: 61 LVLLVGIAMAVVGYWPKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAP 120 LVLLVGIAMAVVGYWPKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAP Sbjct: 61 LVLLVGIAMAVVGYWPKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAP 120 Query: 121 GGVNSSSAGAPRSTPPARAASPSSSSTSVGFFFRIFSGYLHSDKLKVFGPLIMGIGIFLF 180 GGVNSSSAGAPRSTPPARAASPSSSSTSVGFFFRIFSGYLHSDKLKVFGPLIMGIGIFLF Sbjct: 121 GGVNSSSAGAPRSTPPARAASPSSSSTSVGFFFRIFSGYLHSDKLKVFGPLIMGIGIFLF 180 Query: 181 ICANAVLHENRDKKTKIINLRDLYSTVIDVHSLRAKDLAAAAAAAAAAAASSSSSAPAAA 240 ICANAVLHENRDKKTKIINLRDLYSTVIDVHSLRAKDLAAAAAAAAAAAASSSSSAPAAA Sbjct: 181 ICANAVLHENRDKKTKIINLRDLYSTVIDVHSLRAKDLAAAAAAAAAAAASSSSSAPAAA 240 Query: 241 PPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAA 300 PPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAA Sbjct: 241 PPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAA 300 Query: 301 SPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPE 360 SPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPE Sbjct: 301 SPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPE 360 Query: 361 SWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDL 420 SWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDL Sbjct: 361 SWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDL 420 Query: 421 SMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRA 480 SMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRA Sbjct: 421 SMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRA 480 Query: 481 PPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPL 540 PPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPL Sbjct: 481 PPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPL 540 Query: 541 REAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQPQPVQRQFTNKEK 600 REAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQPQPVQRQFTNKEK Sbjct: 541 REAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQPQPVQRQFTNKEK 600 Query: 601 LIMISRSHAIGVEEELESTGI 621 LIMISRSHAIGVEEELESTGI Sbjct: 601 LIMISRSHAIGVEEELESTGI 621 >gi|29789291 transmembrane protein 200A [Homo sapiens] Length = 491 Score = 119 bits (298), Expect = 8e-27 Identities = 77/226 (34%), Positives = 115/226 (50%), Gaps = 58/226 (25%) Query: 1 MIATGGLLR--ISARKQDPLRP-------PSQIPKRKRKAKKRRKNDVVVVKGKLKLCSI 51 MIATGG++ + ++QD R PS + K+ ++R + DVVVV+GK++L S Sbjct: 1 MIATGGVITGLAALKRQDSARSQQHVNLSPSPATQEKKPIRRRPRADVVVVRGKIRLYSP 60 Query: 52 SGLIALCGILVLLVGIAMAVVGYWPKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKN 111 SG L++G+ ++++G G Sbjct: 61 SGFF-------LILGVLISIIGIAMAVLGY------------------------------ 83 Query: 112 RSRSHPRAPGGVNSSSAGAPRSTPPARAASPSSSSTSVGFFFRIFSGYLHSDKLKVFGPL 171 P+ +++ + + T R G R F +LHSDK+K+ GP Sbjct: 84 ----WPQKEHFIDAETTLSTNETQVIRNEG--------GVVVRFFEQHLHSDKMKMLGPF 131 Query: 172 IMGIGIFLFICANAVLHENRDKKTKIINLRDLYSTVIDVHSLRAKD 217 MGIGIF+FICANA+LHENRDK+TKII++RD+YSTVID+H+LR K+ Sbjct: 132 TMGIGIFIFICANAILHENRDKETKIIHMRDIYSTVIDIHTLRIKE 177 Score = 33.1 bits (74), Expect = 0.78 Identities = 13/18 (72%), Positives = 17/18 (94%) Query: 591 VQRQFTNKEKLIMISRSH 608 +++ FTNKEKL+MISRSH Sbjct: 450 IKKDFTNKEKLLMISRSH 467 >gi|51242137 transmembrane protein 200B [Homo sapiens] Length = 307 Score = 73.6 bits (179), Expect = 5e-13 Identities = 63/214 (29%), Positives = 90/214 (42%), Gaps = 56/214 (26%) Query: 29 RKAKKRRKNDVVVVKGKLKLCSISGLIALCGILVLLVGIAMAVVGYWPKATGTNREGGKQ 88 R+ + R + + V+ +L+L S SG A G LV+LVG+ +AV GYWP G Sbjct: 29 RRRRPRSPPEPLRVRARLRLRSPSGAFAALGALVVLVGMGIAVAGYWPHRAGA------- 81 Query: 89 LPPAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTPPARAASPSSSSTS 148 GS A ++SS + R R G RA P Sbjct: 82 ---PGSR------AANASSPQMSELRREGRGGG----------------RAHGPH----- 111 Query: 149 VGFFFRIFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTKIINLRDLYSTVI 208 ++L++ GP+IMG+G+F+FICAN +L+ENRD +T R L V+ Sbjct: 112 --------------ERLRLLGPVIMGVGLFVFICANTLLYENRDLET-----RRLRQGVL 152 Query: 209 DVHSLRAKDLAAAAAAAAAAAASSSSSAPAAAPP 242 +LR D A + S A A P Sbjct: 153 RAQALRPPDGPGWDCALLPSPGPRSPRAVGCAEP 186 >gi|153070260 myristoylated alanine-rich protein kinase C substrate [Homo sapiens] Length = 332 Score = 72.0 bits (175), Expect = 2e-12 Identities = 103/381 (27%), Positives = 140/381 (36%), Gaps = 75/381 (19%) Query: 215 AKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFG 274 AK AAA AA ASS S A G + +NG S + + GS A Sbjct: 10 AKGEAAAERPGEAAVASSPSKANGQEN-GHVKVNGDASPAAAESGAKEELQANGSAPAAD 68 Query: 275 AAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAG 334 A GS P+A G P AA+P + +SP +E P+ EA G Sbjct: 69 KEEPAAAGSGAASPSAAEKGEPAAAAAP-EAGASP-VEKEAPAEGEAAEP---------G 117 Query: 335 SRRAAAATAAAAASSCSSP------APCSPPESWGRQSTASSFVDS-SLSAFALLPLQGG 387 S AA AA+AASS SSP P E+ ++ SF S LS F+ + Sbjct: 118 SPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKE 177 Query: 388 RDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVA 447 GG+AE P E G E G A A Sbjct: 178 AGEGGEAEA-------PAAEGGKDEAAGG--------------------------AAAAA 204 Query: 448 ARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPP-----SPEPPPSPGSADPDSSPLAK 502 A A G + G AA +G A P +PE PP +S K Sbjct: 205 AEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPP--------ASDETK 256 Query: 503 AASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSA 562 AA P ++E + ++ + PS++ G P +EA + E A SA Sbjct: 257 AA--EEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEP-----AAAAASSA 309 Query: 563 VAAPVLGAEQSSPEGASQEPP 583 AAP ++++ PE + + PP Sbjct: 310 CAAP---SQEAQPECSPEAPP 327 >gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens] Length = 816 Score = 60.1 bits (144), Expect = 6e-09 Identities = 104/405 (25%), Positives = 138/405 (34%), Gaps = 53/405 (13%) Query: 216 KDLAAAAAAAAAAAASS----------SSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGG 265 +D A A AAA AA + S P P A+ + G V + L + GG Sbjct: 5 RDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGG 64 Query: 266 CGGSGDAFGAA-AMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCP--REPPSLAEAV 322 GG+ A A + S PP P SP ++S R P L + Sbjct: 65 IGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKG 124 Query: 323 YSVYRERSGVAGSRRAA---AATAAAAASSCSSPAPCSPPESWGRQSTASS----FVDSS 375 + E + G A +A +A A S P P +P + R+S A+ + Sbjct: 125 LRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPA 184 Query: 376 LSAFALLPLQGGRDRGGDA------EGASCSWQRPPGERGSQEIPRGELDLSMTNLRG-- 427 SA P +G R A E + + +RP G Q L S T L Sbjct: 185 PSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPA 244 Query: 428 -AEGSMRGARREPEEPEGAV--AARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSP 484 + S RG R P P +A R PR AL S+S L A PSP Sbjct: 245 RSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL----ATPSP 300 Query: 485 EPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAG 544 PPSP S+P + PSPP T S + Q+ + +PL Sbjct: 301 SAPPSP------SAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPL---- 350 Query: 545 TSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQPQ 589 A A+A P L A S P P PQ Sbjct: 351 --------ATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQ 387 Score = 47.8 bits (112), Expect = 3e-05 Identities = 77/320 (24%), Positives = 97/320 (30%), Gaps = 50/320 (15%) Query: 299 AASPPDLASS--PRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPC 356 AA P L + P PR PP + A V +G G + A ++ AP Sbjct: 18 AARAPGLLTPRPPGSPRPPPPVTPAALRVLGA-AGAVGRKPLAERAGGIGGATIPESAPR 76 Query: 357 SPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRG 416 + P R P G +R A+ S PG P G Sbjct: 77 AGPTRTSRP-----------------PASGRGERAPPAKNTSPGPVSSPGRASGTTRP-G 118 Query: 417 ELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLP 476 L + E RG E + A++A A R G P T A RR +G Sbjct: 119 PLGQKGLRISAEETVARGKATEAPK-RSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 177 Query: 477 DYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRR---DSGSSQSDDPSSS 533 P+P P P P P +S S E SP RR G Q S Sbjct: 178 VGLPRPAPSARPRP----PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSL 233 Query: 534 NKGYTPLREAGTSTESVLDAVAGQTRDSAV-------------------AAPVLGAEQSS 574 + TPL S S S AAP LG SS Sbjct: 234 SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 293 Query: 575 P--EGASQEPPTAEQPQPVQ 592 P + PP+ P +Q Sbjct: 294 PLATPSPSAPPSPSAPPSLQ 313 Score = 44.7 bits (104), Expect = 3e-04 Identities = 95/402 (23%), Positives = 137/402 (34%), Gaps = 54/402 (13%) Query: 220 AAAAAAAAAAASSSSSAPAAAP--PGAIPLNGFLSYVQSRGLELKPGG----CGGSGDAF 273 A + AA AP+A P P P S + E P G G Sbjct: 168 ARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQR 227 Query: 274 GAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVA 333 A+ L+ + P A SG RG +PR P P R Sbjct: 228 PASRSLSSSATPLSSPARSGPSARG---------TPRAPAHPSQPKPKGLQALRPPQVTP 278 Query: 334 GSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGD 393 + AA A ++S ++P+P +PP +A + + S A P Q G Sbjct: 279 PRKDAAPALGPLSSSPLATPSPSAPPSP-----SAPPSLQTLPSPPATPPSQATTSLGSP 333 Query: 394 AEGASCSW-QRPPGERGSQEIPRGELDLSMTNLRGAEGSMRG------ARREPEEPEGAV 446 A+ S+ PP + P+ L++ L+ A P+ P A+ Sbjct: 334 TLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPN-AL 392 Query: 447 AARAARGQGGRLPRTGRYA-----ALRRRSTSGLPDYRAPPS---------PEPPPSPGS 492 A + P A A S S P +APPS P PP SP Sbjct: 393 AVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP-P 451 Query: 493 ADPDSSPLAKAASP--SPPLRLEGSPPTRRDSGSSQS----DDPSSSNKGYTPLREAGTS 546 P ++P +A P +PPL+L PP + ++ P +S G P + + Sbjct: 452 MSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASL 511 Query: 547 TESVLDAVAGQTRDSAVAAPVLGAEQSSPEG----ASQEPPT 584 S L A +AAP+L S P A + PPT Sbjct: 512 PMSPL-ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPT 552 Score = 37.7 bits (86), Expect = 0.032 Identities = 92/360 (25%), Positives = 121/360 (33%), Gaps = 78/360 (21%) Query: 275 AAAMLAKGSWPPHPAAPSGGRP------RGAASPPDLASSPRCPREPPSLAEAVYSVYRE 328 A+ ++ + PP A PS P ASPP S+ P+ PP LA + + Sbjct: 417 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK- 475 Query: 329 RSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGR 388 A A ++ A SPP S+ Q+ S +S A P Q Sbjct: 476 ----------PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPP 525 Query: 389 DRGG------DAEGASCSWQRP-----PGERGSQEIPRGELDLS-----------MTNLR 426 + AS + Q P PG S PR L L+ + L Sbjct: 526 VLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLS 585 Query: 427 GAE--GSMRGARREPEE-------PEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLP- 476 G + G A PEE PEG AA P AA + S P Sbjct: 586 GPDLAGHSSSATSTPEELRGYDSGPEGGAAASP--------PPDAELAACHPAAWSRGPA 637 Query: 477 ---DYR-APPSPEP-PPS--PGSAD----------PDS-SPLAKAASPSPPLRLEGSPPT 518 +R AP +P P PP+ PGSAD P+S +P A P P G Sbjct: 638 PPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAA 697 Query: 519 RRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGA 578 + S P + G PL G SV+ + +T A A G P GA Sbjct: 698 AGAGAGASSRSPKQARLGELPL---GALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGA 754 Score = 36.6 bits (83), Expect = 0.071 Identities = 122/535 (22%), Positives = 171/535 (31%), Gaps = 74/535 (13%) Query: 77 KATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTPP 136 +A GT E G P + R PT S S + + +P SAG P Sbjct: 172 RAAGT--EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPA 229 Query: 137 ARAASPSSSSTSVGFFFRIFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTK 196 +R S SSS+T + R GP G A H ++ K Sbjct: 230 SR--SLSSSATPLSSPARS-------------GPSARGT-------PRAPAHPSQPKPKG 267 Query: 197 IINLRDLYSTVIDVHSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQS 256 + +LR + AA A SSS A P A P +Q+ Sbjct: 268 L-------------QALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQT 314 Query: 257 RGLELKPGGCGGSGD-AFGAAAMLAKGSWPPHP-----AAPSGGRPRGAASPPDLASSPR 310 L P + G+ + A S+ P P A P P A PP L + P Sbjct: 315 --LPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPP-LQAPPS 371 Query: 311 CPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASS 370 P PP A S + +A + + P SPP S +T S Sbjct: 372 PPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS--PSATPPS 429 Query: 371 FVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEG 430 SL+A L + A+ Q PP + L L+ + Sbjct: 430 QAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP------PLAAPPLQLAKPPPQAPPA 483 Query: 431 SMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRS-TSGLPDYRAPPSPEP--- 486 + P + +A LP + + P + PPSP Sbjct: 484 LATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPT 543 Query: 487 ------PPSPGSADPDSSP-LAKAASPSPPLRLEGSPPTRRDSGSSQSDDPS--SSNKGY 537 PP+PG S P L A +P PP PP+R S + D + SS+ Sbjct: 544 LQAPRRPPTPGPDTSVSGPRLTLALAPGPP-----PPPSRSPSSTLSGPDLAGHSSSATS 598 Query: 538 TPLREAGTSTESVLDAVAGQTRDSAVAA--PVLGAEQSSPEGASQEPPTAEQPQP 590 TP G + A A D+ +AA P + +P A + P A P P Sbjct: 599 TPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWP 653 Score = 30.8 bits (68), Expect = 3.9 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 6/59 (10%) Query: 224 AAAAAAASSSSSAPAAAPPGAIPLNGF----LSYVQSRGLEL--KPGGCGGSGDAFGAA 276 AAA A A +SS +P A G +PL + ++ SR L L G GGSG G A Sbjct: 696 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGA 754 >gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapiens] Length = 673 Score = 58.9 bits (141), Expect = 1e-08 Identities = 90/382 (23%), Positives = 148/382 (38%), Gaps = 35/382 (9%) Query: 219 AAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELK-PGGCGGSG--DAFGA 275 + A+ + AS + + P A+P G+ P LS + S L ++ P +G Sbjct: 207 STASITRTLSRASPTGTPPRASPTGSPP-RASLSMMPSTALLIRTPPRASPTGMLSRTSL 265 Query: 276 AAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRC-------PREPPSLAEAVYSVYRE 328 M + S P+ PS P G S L+ +P PR P+ + S+ + Sbjct: 266 TKMDSTASITRTPSRPSTASPTGTPSRASLSMTPSTASLMRMLPRASPTGMLSRTSLTKM 325 Query: 329 RSGVAGSR---RAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQ 385 S + SR RA+ + AS P+ SP + R S S +SL+ + Sbjct: 326 DSTASISRTPPRASITRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASP 385 Query: 386 GGRDRGGDAEG--ASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPE-EP 442 G G ++ S R P P G L S T++ + + R P P Sbjct: 386 TGTPPRASPTGTPSTASLTRKPPRAS----PTGML--SRTSITKMDSTASPTRTPPRASP 439 Query: 443 EGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAK 502 G + G R TG + S +G +P + P SP +A P SP ++ Sbjct: 440 TGTPPRASPTGTPSRASPTGTQSTA---SPTG-----SPSTASPTGSPSTASPTGSP-SR 490 Query: 503 AASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSA 562 A+ P R + T+ +S +S + PS ++ +TP + T + S A+ +R + Sbjct: 491 ASLTRTPSR---ASLTKMESTASITRTPSRASPTWTPSTASPTGSPSTALAMGSPSRAAL 547 Query: 563 VAAPVLGAEQSSPEGASQEPPT 584 P + +P AS P+ Sbjct: 548 TRTPSRASLTRTPSRASLTTPS 569 Score = 42.4 bits (98), Expect = 0.001 Identities = 114/541 (21%), Positives = 181/541 (33%), Gaps = 57/541 (10%) Query: 90 PPAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTPPARAASPSSSSTSV 149 P S R P+TA+ + + S+ P + + S + TPP + ++S S+ Sbjct: 8 PSRASPTRTPSTASLTGTPSRASLTGTPSTASLMGTPSRASLTGTPPRASLKGTTSMASL 67 Query: 150 GFF-FRIFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTKIINLRDLYSTVI 208 R + S L P + A+ R +T+ + L Sbjct: 68 MVSPSRASLTRMQSSSLLTRTPSM----------ASLKRMPPRASRTRTLPRASLMRRPS 117 Query: 209 DVHSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRG-LELKPGGCG 267 R+ A+ + A+ S + S AA +P L+ R L + P Sbjct: 118 TASLTRSPSRASLTTTPSRASLSMTPSTAAAL---TMPSRASLTRTPPRASLTMTP---- 170 Query: 268 GSGDAFGAAAMLAKGSWPPHPAA-PSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVY 326 + A L + P PS P G S L +L+ A + Sbjct: 171 -------STASLTRTPPRASPTGMPSRTSPTGMPSTASLTKMDSTASITRTLSRASPTGT 223 Query: 327 RERSGVAGSR-RAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQ 385 R+ GS RA+ + + A +P SP R S +DS+ S Sbjct: 224 PPRASPTGSPPRASLSMMPSTALLIRTPPRASPTGMLSRTSLTK--MDSTASITRTPSRP 281 Query: 386 GGRDRGGDAEGASCSWQRPPGERGSQEIPRGELD--LSMTNLRGAEGSMRGARREPE--- 440 G AS S P + +PR LS T+L + + +R P Sbjct: 282 STASPTGTPSRASLS-MTPSTASLMRMLPRASPTGMLSRTSLTKMDSTASISRTPPRASI 340 Query: 441 -------EPEGAVAARAARGQGGRLPRTGR--YAALRRRSTSGLPDYRAPPSPEPPPSPG 491 P G + + G R TG A+L S++ P PP P +P Sbjct: 341 TRTPSRASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTASPT-GTPPRASPTGTPS 399 Query: 492 SAD-----PDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTS 546 +A P +SP + S + PTR +S + P ++ TP R + T Sbjct: 400 TASLTRKPPRASPTGMLSRTSITKMDSTASPTRTPPRASPTGTPPRASPTGTPSRASPTG 459 Query: 547 TESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQPQPVQRQFTNKEKLIMISR 606 T+S A T + A+P +SP G+ P + T E I+R Sbjct: 460 TQS----TASPTGSPSTASPTGSPSTASPTGSPSRASLTRTPS--RASLTKMESTASITR 513 Query: 607 S 607 + Sbjct: 514 T 514 Score = 40.4 bits (93), Expect = 0.005 Identities = 74/341 (21%), Positives = 112/341 (32%), Gaps = 45/341 (13%) Query: 222 AAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAK 281 A+ + +S + P+ A P P L+ + S P G G + + Sbjct: 347 ASPTGKPSTASPTGTPSRASPTGSPSTASLTGLSSTA---SPTGTPPRASPTGTPSTASL 403 Query: 282 GSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAA 341 PP A+P+G R + + D +SP R PP + +G RA+ Sbjct: 404 TRKPPR-ASPTGMLSRTSITKMDSTASPT--RTPPRASPTGTPPRASPTGTPS--RASPT 458 Query: 342 TAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSW 401 + AS SP+ SP G STAS S ++ P + + + + Sbjct: 459 GTQSTASPTGSPSTASPT---GSPSTASPTGSPSRASLTRTPSRASLTKMESTASITRTP 515 Query: 402 QRP-PGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEE------PEGAVAARAARGQ 454 R P S P G T L S R P P A +R Sbjct: 516 SRASPTWTPSTASPTGS---PSTALAMGSPSRAALTRTPSRASLTRTPSRASLTTPSRAS 572 Query: 455 GGRLPRTGRYAAL----------RRRSTSGLPDY-------------RAPPSPEPPPSPG 491 R P T + R S +G+P R PP P +P Sbjct: 573 LTRTPSTVLLTRMPPSASPTGMPSRTSPTGMPSSALLTKMDSTASITRTPPRASPTETPP 632 Query: 492 SADPDSSPLAKAASPSPP-LRLEGSPPTRRDSGSSQSDDPS 531 A P +P + + +PP G+PP +G+ P+ Sbjct: 633 RASPTGTPPRASPTGTPPRASPTGTPPRASPTGTPSRASPT 673 Score = 30.8 bits (68), Expect = 3.9 Identities = 17/52 (32%), Positives = 26/52 (50%) Query: 515 SPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAP 566 +PPTR S +S + PS+++ TP R + T T S + +R S P Sbjct: 2 APPTRTPSRASPTRTPSTASLTGTPSRASLTGTPSTASLMGTPSRASLTGTP 53 >gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 1124 Score = 56.6 bits (135), Expect = 7e-08 Identities = 99/389 (25%), Positives = 141/389 (36%), Gaps = 61/389 (15%) Query: 216 KDLAAAAAAAAAAAASS----------SSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGG 265 +D A A AAA AA + S P P A+ + G V + L + GG Sbjct: 5 RDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGG 64 Query: 266 CGGS---GDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSP---------RCPR 313 GG+ A A + G+ +PA+ RG +PP +SP Sbjct: 65 IGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTT 124 Query: 314 EPPSLAEAVYSVYRERSGVAGSRRAA---AATAAAAASSCSSPAPCSPPESWGRQSTAS- 369 P L + + E + G A +A +A A S P P +P + R+S A+ Sbjct: 125 RPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAG 184 Query: 370 ---SFVDSSLSAFALLPLQGGRDRGGDA------EGASCSWQRPPGERGSQEIPRGELDL 420 + SA P +G R A E + + +RP G Q L Sbjct: 185 TEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSS 244 Query: 421 SMTNLRG---AEGSMRGARREPEEPE--GAVAARAARGQGGRLPRTGRYAALRRRSTSGL 475 S T L + S RG R P P +A R PR AL S+S L Sbjct: 245 SATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL 304 Query: 476 PDYRAPPSP-----EPPPSPGSADPDSSPLAKAASPSPPLRL--------EGSPPTRRDS 522 A PSP P P P +A ++PL PSPPL +PP+ + Sbjct: 305 ----ATPSPSGTKARPVPPPDNA---ATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTL 357 Query: 523 GSSQSDDPSSSNKGY-TPLREAGTSTESV 550 S + PS + TP +A S +++ Sbjct: 358 PSPPATPPSQAPPSMTTPPMQAPPSLQTI 386 Score = 51.6 bits (122), Expect = 2e-06 Identities = 80/316 (25%), Positives = 96/316 (30%), Gaps = 39/316 (12%) Query: 299 AASPPDLASS--PRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPC 356 AA P L + P PR PP + A V V A A A+ Sbjct: 18 AARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI------- 70 Query: 357 SPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRG 416 PES R S SS + + P G +R A+ S PG P G Sbjct: 71 --PESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRP-G 127 Query: 417 ELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLP 476 L + E RG E + A++A A R G P T A RR +G Sbjct: 128 PLGQKGLRISAEETVARGKATEAPK-RSALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 186 Query: 477 DYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRR---DSGSSQSDDPSSS 533 P+P P P P P +S S E SP RR G Q S Sbjct: 187 VGLPRPAPSARPRP----PTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSL 242 Query: 534 NKGYTPLREAGTSTESVLDAVAGQTRDSAV-------------------AAPVLGAEQSS 574 + TPL S S S AAP LG SS Sbjct: 243 SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 302 Query: 575 PEGASQEPPTAEQPQP 590 P T +P P Sbjct: 303 PLATPSPSGTKARPVP 318 Score = 48.5 bits (114), Expect = 2e-05 Identities = 76/322 (23%), Positives = 110/322 (34%), Gaps = 30/322 (9%) Query: 220 AAAAAAAAAAASSSSSAPAAAPPG------AIPLN----GFLSYVQSRGLELKPGGCGGS 269 +A A +A +SS PA+ PP A P G +S +PG G Sbjct: 73 SAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQK 132 Query: 270 GDAFGAAAMLAKG--SWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAV----- 322 G A +A+G + P +A S G R + P SP R + V Sbjct: 133 GLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP 192 Query: 323 YSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALL 382 R R G R++ ++ + + + S A P G Q AS + SS + + Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSP 252 Query: 383 PLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEP 442 G RG A S +P +G Q + ++ + A G + + P Sbjct: 253 ARSGPSARGTPRAPAHPSQPKP---KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSP 309 Query: 443 EGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPP------PSPGSADPD 496 G A P A L P APPSP P PSP + P Sbjct: 310 SGTKARPVPPPDNAATPLP---ATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPS 366 Query: 497 SSPLAKAASP-SPPLRLEGSPP 517 +P + P P L+ PP Sbjct: 367 QAPPSMTTPPMQAPPSLQTIPP 388 Score = 42.4 bits (98), Expect = 0.001 Identities = 93/346 (26%), Positives = 115/346 (33%), Gaps = 63/346 (18%) Query: 285 PPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAA 344 PP A P P ASPP S+ PR PP LA V A Sbjct: 728 PPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQ 787 Query: 345 AAASSCSSP--APCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGG------DAEG 396 A + + P A SPP S+ Q+ S +S A P Q + Sbjct: 788 APPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPP 847 Query: 397 ASCSWQRP-----PGERGSQEIPRGELDLS-----------MTNLRGAE--GSMRGARRE 438 AS + Q P PG S PR L L+ + L G + G A Sbjct: 848 ASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATST 907 Query: 439 PEE-------PEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLP----DYR-APPSPEP 486 PEE PEG AA P AA + S P +R AP +P P Sbjct: 908 PEELRGYDSGPEGGAAASP--------PPDAELAACHPAAWSRGPAPPLAFRGAPGAPLP 959 Query: 487 -PPS--PGSAD----------PDS-SPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSS 532 PP+ PGSAD P+S +P A P P G + S P Sbjct: 960 WPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQ 1019 Query: 533 SNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGA 578 + G PL G SV+ + +T A A G P GA Sbjct: 1020 ARLGELPL---GALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGA 1062 Score = 36.6 bits (83), Expect = 0.071 Identities = 34/120 (28%), Positives = 44/120 (36%), Gaps = 9/120 (7%) Query: 476 PDYRAPPSP--EPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSS 533 P +AP SP PP SP + P +P + AA PPL++ SPP S + P + Sbjct: 671 PPVQAPFSPPASPPVSPSATPPSQAPPSLAA---PPLQVPPSPPASPPMSPSATPPPQAP 727 Query: 534 NKGYTPLREAGTSTESVLDAVAGQTRDSAV----AAPVLGAEQSSPEGASQEPPTAEQPQ 589 P + S + T V AAP L S P P PQ Sbjct: 728 PPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQ 787 Score = 35.8 bits (81), Expect = 0.12 Identities = 88/407 (21%), Positives = 137/407 (33%), Gaps = 87/407 (21%) Query: 196 KIINLRDLYSTVIDVHSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQ 255 K ++ +ST + R + A A+ + SSS+ P ++P + P Sbjct: 207 KSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAP 266 Query: 256 SRGLELKPGGCGG---------SGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLA 306 + + KP G DA A L+ S P +PSG + R PPD A Sbjct: 267 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLS--SSPLATPSPSGTKAR-PVPPPDNA 323 Query: 307 SSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQS 366 ++P PPS A + P+P +PP S Sbjct: 324 ATPLPATLPPS------------------------PPLATPLPLAPPSPSAPPSLQTLPS 359 Query: 367 TASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLR 426 ++ + + P+Q PP Q IP ++ S+T+ Sbjct: 360 PPATPPSQAPPSMTTPPMQA-----------------PPS---LQTIPPIQVPHSLTS-- 397 Query: 427 GAEGSMRGARREPEEPEGAVAARAARGQGG-RLPRTGRYAALRRRSTSGLPDYRAPPSPE 485 + + P P + +A G L T + + R T S Sbjct: 398 -------PSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQA--------SLT 442 Query: 486 PPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGT 545 P P S PDS PL PL L SPP + + S + P SS PL+ Sbjct: 443 SPSRPASTPPDSPPL------QAPLSLPASPPLQ--TSLSPAVSPLSSPLTIHPLQAL-- 492 Query: 546 STESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQPQPVQ 592 S L + + Q S++ P L + S + Q PP + P++ Sbjct: 493 ---SSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLE 536 Score = 35.4 bits (80), Expect = 0.16 Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 13/128 (10%) Query: 471 STSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPS------PPLRLEGSPPTRRDSGS 524 S+ P +APP+ PP G P SPLA + PPL+ SPP Sbjct: 585 SSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSP 644 Query: 525 SQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPT 584 + P + N L +A S + Q S A+P + + P SQ PP+ Sbjct: 645 LATPSPQAPNALAVHLLQAPFSPP---PSPPVQAPFSPPASPPVSPSATPP---SQAPPS 698 Query: 585 AEQPQPVQ 592 P P+Q Sbjct: 699 LAAP-PLQ 705 Score = 35.0 bits (79), Expect = 0.21 Identities = 34/113 (30%), Positives = 47/113 (41%), Gaps = 10/113 (8%) Query: 483 SPEPPPSPGSADPDSSP-LAKAASPSPPLRLEGSPPTRRDSGSSQSDDPS--SSNKGYTP 539 +P PP+PG S P L A +P PP PP+R S + D + SS+ TP Sbjct: 854 APRRPPTPGPDTSVSGPRLTLALAPGPP-----PPPSRSPSSTLSGPDLAGHSSSATSTP 908 Query: 540 LREAGTSTESVLDAVAGQTRDSAVAA--PVLGAEQSSPEGASQEPPTAEQPQP 590 G + A A D+ +AA P + +P A + P A P P Sbjct: 909 EELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWP 961 Score = 34.7 bits (78), Expect = 0.27 Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 12/71 (16%) Query: 471 STSGLPDYRAPPS---------PEPPPSPGSADPDSSPLAKAASP--SPPLRLEGSPPTR 519 S S P +APPS P PP SP P ++P +A P +PPL++ SPP Sbjct: 686 SPSATPPSQAPPSLAAPPLQVPPSPPASP-PMSPSATPPPQAPPPLAAPPLQVPPSPPAS 744 Query: 520 RDSGSSQSDDP 530 S + P Sbjct: 745 PPMSPSATPPP 755 Score = 32.3 bits (72), Expect = 1.3 Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Query: 479 RAPPSP--EPPPSPGSADPDSSPLAKAASPSPPLRLEGSPP 517 +APPSP PPP S+ P A A SPPL+ SPP Sbjct: 570 QAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPP 610 Score = 30.8 bits (68), Expect = 3.9 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 6/59 (10%) Query: 224 AAAAAAASSSSSAPAAAPPGAIPLNGF----LSYVQSRGLEL--KPGGCGGSGDAFGAA 276 AAA A A +SS +P A G +PL + ++ SR L L G GGSG G A Sbjct: 1004 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGA 1062 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 56.6 bits (135), Expect = 7e-08 Identities = 92/368 (25%), Positives = 123/368 (33%), Gaps = 48/368 (13%) Query: 226 AAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWP 285 AA+AA AP A ++V S P G G+G A A A A G+ P Sbjct: 34 AASAAHHHHLAPRTPEVRAAAAGALGNHVVSGS----PAGAAGAGPA--APAEGAPGAAP 87 Query: 286 PHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAA 345 P A RP G SPR P P A + G AGS A AAA Sbjct: 88 EPPPA-GRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGS--CAPVPAAA 144 Query: 346 AASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPP 405 A ++ PAP P + G + A+ R G G P Sbjct: 145 AVAAGPEPAPAGPAKPAGPAALAA--------------------RAGPGPGPGPG----P 180 Query: 406 GERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAA--RGQGGRLPRTGR 463 G P G GA ++ G+ A A + G LP Sbjct: 181 GPGPGPGKPAGP---------GAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKP 231 Query: 464 YA---ALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRR 520 A ++ G AP +P PP +P A P ++P +P+ R G P Sbjct: 232 AAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPP 291 Query: 521 DSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQT-RDSAVAAPVLGAEQSSPEGAS 579 + + ++ N G A V+GQ +A AAP G + SP+ Sbjct: 292 TAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVV 351 Query: 580 QEPPTAEQ 587 Q P A Q Sbjct: 352 QAAPPAAQ 359 Score = 48.5 bits (114), Expect = 2e-05 Identities = 100/416 (24%), Positives = 148/416 (35%), Gaps = 59/416 (14%) Query: 216 KDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGA 275 K AA +A+ +S AAAP ++ NG + + PG + GA Sbjct: 188 KPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPK-PAAPGTVIQTPPFVGA 246 Query: 276 AAMLAKGS----WPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSG 331 AA A + P PAAP+ P +P LA P P PP+ A AV ++G Sbjct: 247 AAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNG 306 Query: 332 VAGSRRAAAATAAAA------------ASSCSSPAPCSPPESWGRQSTASSFVDSSLSAF 379 GS AA A A AA ++ ++PAP ES R A+ +L+A Sbjct: 307 --GSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAAS 364 Query: 380 ALLPLQGGRDRGGDAEGA--SCSWQRPPGERGSQEIPRGELDLSMTNL-RGAEGSMRGAR 436 G +GA S + PP +P+G +L R + G R Sbjct: 365 GPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIR 424 Query: 437 ----------REPEEPE------------GAVAARAARGQGGRLPRTGRYAALRRRSTSG 474 R P+ P+ G V R+ GQ +P+ AL + Sbjct: 425 ATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQ----QALAQMQA-- 478 Query: 475 LPDYRAPPSPEPPPSPGSADPDSSP---LAKAASPSPPLRLEGSPPTRRDSGSSQSDDPS 531 +A P+ +P A P S+P ++ +P P+ PT SQ+ + Sbjct: 479 ----QAHAQPQTTMAPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTIIKQVSQAQ--T 532 Query: 532 SSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQ 587 + T R G + VL A A G Q + GA+ A + Sbjct: 533 TVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAVQTGTPQRTVPGATTTSSAATE 588 Score = 37.4 bits (85), Expect = 0.041 Identities = 46/176 (26%), Positives = 54/176 (30%), Gaps = 25/176 (14%) Query: 439 PEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPE------------- 485 P GA A A G G P A R R G P PPSP Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPP--PAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAA 124 Query: 486 ---PPP--SPGSADPDSSPLAKAASPSP----PLRLEGSPPTRRDSGSSQSDDPSSSNKG 536 PPP S GS P + A AA P P P + G +G P G Sbjct: 125 KLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGP-GPGPG 183 Query: 537 YTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQPQPVQ 592 P + AG L+ A AAP + + P P A +Q Sbjct: 184 PGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQ 239 >gi|33188461 GATA binding protein 4 [Homo sapiens] Length = 442 Score = 56.2 bits (134), Expect = 9e-08 Identities = 102/415 (24%), Positives = 147/415 (35%), Gaps = 51/415 (12%) Query: 221 AAAAAAAAAASSSSSAPAAAPPGAIPLNGF-LSYVQSRGLELKPGGCGGSGDAFGAAAML 279 A A + ++S+P P +P + LSY+Q G GG G G + GAA+ Sbjct: 20 AGGPGAFMHGAGAASSPVYVPTPRVPSSVLGLSYLQGGGAGSASGGASG-GSSGGAASGA 78 Query: 280 AKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSV-------YRERSGV 332 G+ P G A +PP ++ P SLA A + Y G Sbjct: 79 GPGTQQGSPGWSQAGADGAAYTPPPVSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGGA 138 Query: 333 AGSRRAAAATAAAA--ASSCSSPAPCSPPE---SWGRQSTASS--FVDSSLSAFALLPLQ 385 AG+ A A A S SSP P + SW + AS+ F L + Sbjct: 139 AGAGLAGREQYGRAGFAGSYSSPYPAYMADVGASWAAAAAASAGPFDSPVLHSLPGRANP 198 Query: 386 GGRDRGGD-----AEGASCSWQRPPGERGSQEIPRGELDLS---MTNLRGAEGSMRGARR 437 R D +EG C G+ P D + + N G M G R Sbjct: 199 AARHPNLDMFDDFSEGRECV------NCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINR 252 Query: 438 EPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRA---------PPSPEPPP 488 +P+ ++A G +T L RR+ G P A P P Sbjct: 253 PLIKPQRRLSASRRVGLSCANCQTTT-TTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMR 311 Query: 489 SPGSADPDSSP--LAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTS 546 G P L K+ +P+ P E PP S +S + SSS + E G S Sbjct: 312 KEGIQTRKRKPKNLNKSKTPAAPSGSESLPPASGASSNSSNATTSSSEEMRPIKTEPGLS 371 Query: 547 TESVLDAVAGQTRDSAVAA-------PVLGAEQSSPEGASQEPPTAEQPQPVQRQ 594 + + QT + + PVL A + SP+G + P ++ PQ +Q Sbjct: 372 SHYGHSSSVSQTFSVSAMSGHGPSIHPVLSALKLSPQGYAS--PVSQSPQTSSKQ 424 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 56.2 bits (134), Expect = 9e-08 Identities = 80/345 (23%), Positives = 123/345 (35%), Gaps = 42/345 (12%) Query: 288 PAAPSGGRPRGAASPPDLASSPRCPRE------PPSLAEAVYSVYRER-SGVAGSRRAAA 340 P PS R A+SP PR P P L + + R SG + + Sbjct: 1411 PRTPSRERSSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIP 1470 Query: 341 ATAAAAASSC-SSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASC 399 T + S C SSP P + P++ +S + S + + + G + D + + Sbjct: 1471 RTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVA- 1529 Query: 400 SWQRPPGERG----SQEIP---------RGELDLSMTNLRGAEGSMRGARREPEEPEGAV 446 + P G+R SQE+ R E D S + +R R PE Sbjct: 1530 --RTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDS 1587 Query: 447 AARAA--RGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAA 504 +R + R + G P R+ SG P +P P P + SS + Sbjct: 1588 KSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGP 1647 Query: 505 SPSPPLRLEGS---PPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDS 561 SP E S PP R + P K TP R + + L A +R S Sbjct: 1648 SPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRS 1707 Query: 562 AVAAPVLGAEQSSPEGASQEP------PTAEQPQPVQRQFTNKEK 600 A+ SSPE S+ P P+ P+P ++ +++ + Sbjct: 1708 RSAS-------SSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRR 1745 Score = 49.3 bits (116), Expect = 1e-05 Identities = 89/408 (21%), Positives = 147/408 (36%), Gaps = 53/408 (12%) Query: 211 HSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGA------IPLNGFLSYVQSRGLELKPG 264 H+ ++A + AAA A AS +S+ A A GA +PL+ + L Sbjct: 2345 HATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDR 2404 Query: 265 GCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYS 324 + + + + + P P++ G P + PP PR P P + ++ Sbjct: 2405 ARSRTPPSAPSQSRMTSER-APSPSSRMGQAPSQSLLPP-AQDQPRSP-VPSAFSDQSRC 2461 Query: 325 VYRERSGVAGSRRAAAATAAAAASSC-------SSPAPCSPPESWGRQSTASSFVDSSLS 377 + + + VAGS+ ++ A SS S PAP P G ++ S Sbjct: 2462 LIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSDVGEPPASTGAQQPS-- 2519 Query: 378 AFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARR 437 AL LQ ++R + +S S S S ++ G+ S Sbjct: 2520 --ALAALQPAKERRSSSSSSSSSSSSSSSSSSS----------SSSSSSGSSSSDSEGSS 2567 Query: 438 EPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDS 497 P +PE A+ R+P A + G P PEP P+ S Sbjct: 2568 LPVQPEVALK---------RVPSPT--PAPKEAVREGRP-------PEPTPAKRKRRSSS 2609 Query: 498 SPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLR---EAGTSTESVLDAV 554 S + ++S S S + S SS S SSS+ +P + +A S Sbjct: 2610 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPP 2669 Query: 555 AGQTRDSAVAAPV--LGAEQSSPEGASQEPPTAEQPQPVQRQFTNKEK 600 G+ R + P+ L +S + + QP P +Q ++ E+ Sbjct: 2670 PGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSER 2717 Score = 46.6 bits (109), Expect = 7e-05 Identities = 103/463 (22%), Positives = 163/463 (35%), Gaps = 87/463 (18%) Query: 208 IDVHSLRAKDLA--AAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGG 265 + + SLR A A+ AA+AAA + +SA A P A+ L + + + L Sbjct: 2215 VPLMSLRTAPAANLASRIPAASAAAMNLASARTPAIPTAVNLADSRTPAAAAAMNLASPR 2274 Query: 266 CGGSGDAFGAA------AMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLA 319 + A A A + PAA + G+ +PP A+ P R P + A Sbjct: 2275 TAVAPSAVNLADPRTPTAPAVNLAGARTPAALAALSLTGSGTPPTAANYPSSSRTPQAPA 2334 Query: 320 EAVYSVYRERS-------GVAGSRRAAAATAAAAASSCSSPA-----------PCS---- 357 A ++ RS +AGSR AAA A+ S+ +PA P S Sbjct: 2335 SA--NLVGPRSAHATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYER 2392 Query: 358 -----------------PPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGD------- 393 PP + + S S S P Q D Sbjct: 2393 VSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVP 2452 Query: 394 ---AEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGA------RREPEEPEG 444 ++ + C + GSQ + G + + T+ G M + EP Sbjct: 2453 SAFSDQSRCLIAQTTPVAGSQSLSSGAV-ATTTSSAGDHNGMLSVPAPGVPHSDVGEPPA 2511 Query: 445 AVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSS------ 498 + A+ P R ++ S+S + S S GS+ DS Sbjct: 2512 STGAQQPSALAALQPAKERRSS-SSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPV 2570 Query: 499 ----PLAKAASPSPPLR---LEGSPP------TRRDSGSSQSDDPSSSNKGYTPLREAGT 545 L + SP+P + EG PP +R S SS S SSS+ + + + Sbjct: 2571 QPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSS 2630 Query: 546 STESVLDAVAGQTRDSAVAAPVLGAEQSSPEGAS-QEPPTAEQ 587 S+ S + + + S+ +P Q+ P+ AS ++PP E+ Sbjct: 2631 SSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGER 2673 Score = 44.3 bits (103), Expect = 3e-04 Identities = 67/295 (22%), Positives = 117/295 (39%), Gaps = 28/295 (9%) Query: 215 AKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLE-------LKPGGCG 267 ++ L++ A A ++A + + PG +P + S G + L+P Sbjct: 2472 SQSLSSGAVATTTSSAGDHNGMLSVPAPG-VPHSDVGEPPASTGAQQPSALAALQPAKER 2530 Query: 268 GSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSP-----RCPREPPSLAEAV 322 S + +++ + S ++ S G + L P R P P+ EAV Sbjct: 2531 RSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAV 2590 Query: 323 YSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALL 382 A +R +++++++++SS SS + S S S++SS SS S+ + Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650 Query: 383 PLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEP 442 P + G + + PPGER S+ PR +D S+ + R S RR +P Sbjct: 2651 PAKPGPQA---LPKPASPKKPPPGERRSRS-PRKPID-SLRDSRSLSYSPVERRRPSPQP 2705 Query: 443 EGAVAARAARGQGGRLPRTG--RYAALRRRSTSGLPDYRAPPSPEPPPSPGSADP 495 ++ +G R + G R + +RR R PSP P S P Sbjct: 2706 SPRDQQSSSSERGSRRGQRGDSRSPSHKRR--------RETPSPRPMRHRSSRSP 2752 Score = 41.2 bits (95), Expect = 0.003 Identities = 70/295 (23%), Positives = 103/295 (34%), Gaps = 41/295 (13%) Query: 327 RERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQG 386 R RSG + R+ + T+ + S SSP S R + SS + S +L Sbjct: 721 RGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLR---- 776 Query: 387 GRDRGGDAEGASCSWQRPPGE-RGSQEIPRGELDLSMTNLRGAEGSM----RGARREPEE 441 R G + Q PP R P+ + S T R + S + + P Sbjct: 777 -RSLSGSSPCPKQKSQTPPRRSRSGSSQPKAK---SRTPPRRSRSSSSPPPKQKSKTPSR 832 Query: 442 PEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRA----PPSPE------------ 485 + ++ + + G PR G + + S P R+ P PE Sbjct: 833 QSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCS 892 Query: 486 ---PPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLRE 542 PP S P SP ++++SP P ++ SP R SGSS S PS TP R Sbjct: 893 GSSPPRVKSSTPPRQSP-SRSSSPQPKVKAIISPRQRSHSGSS-SPSPSRVTSRTTPRRS 950 Query: 543 AGTSTESVLD-------AVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQPQP 590 S S ++ + +G + P QS S P Q P Sbjct: 951 RSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPKVKAQTPP 1005 Score = 33.9 bits (76), Expect = 0.46 Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 6/79 (7%) Query: 75 WPKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAP--- 131 W ++ R G + P R T S S R RSH R+P S + P Sbjct: 522 WGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARR 581 Query: 132 ---RSTPPARAASPSSSST 147 RS PAR S S + T Sbjct: 582 GRSRSRTPARRRSRSRTPT 600 Score = 33.5 bits (75), Expect = 0.60 Identities = 113/496 (22%), Positives = 158/496 (31%), Gaps = 88/496 (17%) Query: 96 HRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTPPARAASPSSSSTSVGFFFRI 155 HR PT + S K R RS P S A RST A +AS S +S S R Sbjct: 229 HRSPTPKSKRKSKDKKRKRSRSTTPA---PKSRRAHRSTS-ADSASSSDTSRSRS---RS 281 Query: 156 FSGYLHSDKLKVFGPLIM----GIGIFLFICANAVLHENRDKKTKIINLRDLYSTVIDVH 211 + H+ L P G G +A E T+ + + +T Sbjct: 282 AAAKTHTTALAGRSPSPASGRRGEG-------DAPFSEPGTTSTQRPSSPET-ATKQPSS 333 Query: 212 SLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGD 271 KD +A + S S+ PP PL + R GGS Sbjct: 334 PYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPL------LAERH--------GGSPQ 379 Query: 272 AFGAAAMLAKGSWPPHPAAPSGGR---------PRGAAS---PPD---------LASSPR 310 + + PP A+P+ R P+ ++S PP +SSP Sbjct: 380 PLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPE 439 Query: 311 CPREPPS------LAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGR 364 P+ P+ ++ + S R G A ++ + T + SPA S R Sbjct: 440 SPKPAPAPGSHREISSSPTSKNRSH-GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSR 498 Query: 365 QSTASSFVDSSLSAF--ALLPLQGGRDRGGDAEGASCSWQRPPGERG--------SQEIP 414 T S + + + GR R G S S QRP R S+ Sbjct: 499 TPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSAR 558 Query: 415 RGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSG 474 RG RG S ARR R+ R R A R RS S Sbjct: 559 RGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSR 618 Query: 475 LPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEG----SPPTRRDSGSSQSDDP 530 P R + SP+ + + P R G P RR S++ Sbjct: 619 TPARRRSRT-------------RSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPAR 665 Query: 531 SSSNKGYTPLREAGTS 546 ++ TP R +G S Sbjct: 666 RGRSRSRTPARRSGRS 681 Score = 32.3 bits (72), Expect = 1.3 Identities = 64/255 (25%), Positives = 94/255 (36%), Gaps = 45/255 (17%) Query: 335 SRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGD- 393 SRRA +T+A +ASS + S +S A+ ++L+ + P G R G Sbjct: 257 SRRAHRSTSADSASSSDTSRSRS-------RSAAAKTHTTALAGRSPSPASGRRGEGDAP 309 Query: 394 -AEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPE------EPEGAV 446 +E + S QRP + + P + + + E S PE EP Sbjct: 310 FSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKK--EKSATRPSPSPERSSTGPEPPAPT 367 Query: 447 AARAARGQGGRLPRT------------GRYAALRRRSTSGLPDY--------RAPPSPEP 486 A R G P + R RS P+ +PPSP+ Sbjct: 368 PLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQ- 426 Query: 487 PPSPGSADPDSSPLAKAASPSPPLRLE--GSPPTRRDSGSSQSDDPSSSNKGYTPLREAG 544 P+ S SSP + +P+P E SP ++ S D S S +TP R G Sbjct: 427 -PTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHS---HTPSRRMG 482 Query: 545 TSTESVLDAVAGQTR 559 S S A G++R Sbjct: 483 RS-RSPATAKRGRSR 496 Score = 31.2 bits (69), Expect = 3.0 Identities = 19/69 (27%), Positives = 32/69 (46%) Query: 76 PKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTP 135 P+ T R+ + SS ++++SSSS S + S S + +SSS+ +P Sbjct: 2596 PEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPG 2655 Query: 136 PARAASPSS 144 P P+S Sbjct: 2656 PQALPKPAS 2664 Score = 30.8 bits (68), Expect = 3.9 Identities = 21/71 (29%), Positives = 27/71 (38%) Query: 76 PKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTP 135 P + T R G + P + R P SS S + ++ SSS TP Sbjct: 1662 PPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTP 1721 Query: 136 PARAASPSSSS 146 P SPS SS Sbjct: 1722 PRHRRSPSVSS 1732 Score = 30.4 bits (67), Expect = 5.1 Identities = 34/135 (25%), Positives = 52/135 (38%), Gaps = 11/135 (8%) Query: 468 RRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPT----RRDSG 523 R RST+ P R S S+D S AA+ + L G P+ RR G Sbjct: 247 RSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEG 306 Query: 524 SSQSDDPSSSNKGYTPLREAGT-STESVLDAVAGQTRDSAVAAPVLGAEQSS--PEGASQ 580 + +P +++ E T S + ++ + P E+SS PE + Sbjct: 307 DAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAP 366 Query: 581 EPPTAEQ----PQPV 591 P AE+ PQP+ Sbjct: 367 TPLLAERHGGSPQPL 381 Score = 30.4 bits (67), Expect = 5.1 Identities = 72/317 (22%), Positives = 105/317 (33%), Gaps = 33/317 (10%) Query: 281 KGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAA 340 K P + PR +S P S R P + + R SG + S + Sbjct: 882 KSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSG-SSSPSPSR 940 Query: 341 ATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDR--GGDAEGAS 398 T+ S +PCS ES R S SS + P R G + Sbjct: 941 VTSRTTPRRSRSVSPCSNVES--RLLPRYSHSGSSSPDTKVKPETPPRQSHSGSISPYPK 998 Query: 399 CSWQRPPGERGSQEIPRGELDLSMTNL-RGAEGSMR-----GARREPEEPEGAVAARAAR 452 Q PPG S + S +L + GS+ + P E V++ + Sbjct: 999 VKAQTPPGPSLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLK 1058 Query: 453 GQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRL 512 GQ P RS + P+ R S P S S S ++ S SP L Sbjct: 1059 GQSQTSPD--------HRSDTSSPEVRQSHSESP--SLQSKSQTSPKGGRSRSSSPVTEL 1108 Query: 513 EGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQ 572 P R+D G + +P+ ++G S E + + + +LG Q Sbjct: 1109 ASRSPIRQDRGEFSA----------SPMLKSGMSPEQSRFQSDSSSYPTVDSNSLLG--Q 1156 Query: 573 SSPEGASQEPPTAEQPQ 589 S E A + A PQ Sbjct: 1157 SRLETAESKEKMALPPQ 1173 Score = 30.4 bits (67), Expect = 5.1 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 8/66 (12%) Query: 83 REGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTPPARAASP 142 REG P R ++++SSSS S + S S +SSS+ + S+ + ++S Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSS--------SSSSSSSSSSSSSSSSSSS 2642 Query: 143 SSSSTS 148 SSSS+S Sbjct: 2643 SSSSSS 2648 Score = 29.6 bits (65), Expect = 8.6 Identities = 16/58 (27%), Positives = 32/58 (55%) Query: 86 GKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTPPARAASPS 143 G+ P + + ++++SSSS S + S S + +SSS+ + S+ + ++SPS Sbjct: 2593 GRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650 >gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] Length = 2285 Score = 55.5 bits (132), Expect = 1e-07 Identities = 113/464 (24%), Positives = 151/464 (32%), Gaps = 109/464 (23%) Query: 221 AAAAAAA------AAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGG---SGD 271 AAAAAAA AAA S PA PP PL L G E GG GG SG Sbjct: 39 AAAAAAAERGEMKAAAGQESEGPAVGPPQ--PLGKELQ----DGAESNGGGGGGGAGSGG 92 Query: 272 AFGAAAML--AKGSWPPHPAAPS----------GGRPRGAASPPDLASSPRCP------- 312 GA L + G+ P PA + GG G +PP A++ P Sbjct: 93 GPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQ 152 Query: 313 ---REPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAAS--SCSSPAPCSPPESWGRQST 367 R P ++A A +V+ ++ G S AA + + P S + Sbjct: 153 PYGRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQY 212 Query: 368 ASSFVDSSL-----SAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSM 422 S + + S A+AL +GG G A A + PP S Sbjct: 213 NSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGS--KPPPSSSASASSSSSSFAQQR 270 Query: 423 TNLRGAEG----------------------SMRGARREPEEPEGAVAARAARGQGGRLPR 460 G G S AR P G + G G+ P Sbjct: 271 FGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPA 330 Query: 461 T-------GRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPL--- 510 AA + SG R S P SPGS+ PLA+ PS P+ Sbjct: 331 DMASQCWGAAAAAAAAAAASGGAQQR---SHHAPMSPGSSGGGGQPLARTPQPSSPMDQM 387 Query: 511 -RLEGSPPTRRDSGSSQSDDPSSSNKGY----------TPLREAGTSTESVLDAVAGQTR 559 ++ P + S Q PS +G+ TP R T A+ G + Sbjct: 388 GKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSY 447 Query: 560 DSAVAAPVLGAE---------------QSSPEGASQEPPTAEQP 588 + P G + Q SP Q+PP ++QP Sbjct: 448 TQQI--PPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQP 489 Score = 49.7 bits (117), Expect = 8e-06 Identities = 94/399 (23%), Positives = 134/399 (33%), Gaps = 65/399 (16%) Query: 220 AAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAML 279 AAAAA + SSS+SA +++ S+ Q R G GG G Sbjct: 243 AAAAAGSKPPPSSSASASSSSS----------SFAQQRF-----GAMGGGG--------- 278 Query: 280 AKGSWPPHPAAPSGGRPRGAASPP--DLASSPRCPREPPSLAEAVYSVYRERSGV----- 332 P+A GG P+ A+P L +SP R YS + G Sbjct: 279 --------PSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPA 330 Query: 333 --------AGSRRAAAATAAAAASSCSSPAPCSPPESWG------RQSTASSFVDSSLSA 378 A + AAAA A+ A S AP SP S G R SS +D + Sbjct: 331 DMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQ-MGK 389 Query: 379 FALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARRE 438 P GG + +G Q+ G G + MT A+ +M G Sbjct: 390 MRPQPY-GGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYT 448 Query: 439 PEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSS 498 + P + GQ G+ P + + ++ P + PPS P P S Sbjct: 449 QQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQP--PYSQQPPSQTPHAQPSYQQQPQS 506 Query: 499 PLAKAASPSPPLRLEGSPPTRRDSGS------SQSDDPSSSNKGYTPLREAGTSTESVLD 552 + S PP + S P + S + S + S Y+ + + Sbjct: 507 QPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQ 566 Query: 553 AVAGQTRDSAVAAPVLGAEQSSPEGASQE--PPTAEQPQ 589 A T A P ++QS SQ+ PP E Q Sbjct: 567 QPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQ 605 Score = 30.4 bits (67), Expect = 5.1 Identities = 78/319 (24%), Positives = 107/319 (33%), Gaps = 94/319 (29%) Query: 339 AAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDR---GGDAE 395 AA A AAASS +P P PP S +++ ++ A A + G + G ++E Sbjct: 2 AAQVAPAAASSLGNPPP--PPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESE 59 Query: 396 GASCSWQRPPGER----------------GSQEIPRGELDLSMTNLR------------- 426 G + +P G+ GS P E DL +N Sbjct: 60 GPAVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTE 119 Query: 427 ----GAEGSMRGARREPE--------------EPEG----AVAARAA----RGQGGRLPR 460 G GS G P +P G AVAA AA + GG+ + Sbjct: 120 PPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQ--Q 177 Query: 461 TGRYAALRRRSTSGLPDYRAPP--------------------SPEPPPSPGSADPDSSPL 500 + AAL+ GL Y P S PPP+P A SSP Sbjct: 178 SPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYA--LSSP- 234 Query: 501 AKAASP-SPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTR 559 + +P S GS P S S+ S S + + + + G S AG Sbjct: 235 -RGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPS-------AAGGGT 286 Query: 560 DSAVAAPVLGAEQSSPEGA 578 A P L +SP A Sbjct: 287 PQPTATPTLNQLLTSPSSA 305 >gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] Length = 2068 Score = 55.5 bits (132), Expect = 1e-07 Identities = 113/464 (24%), Positives = 151/464 (32%), Gaps = 109/464 (23%) Query: 221 AAAAAAA------AAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGG---SGD 271 AAAAAAA AAA S PA PP PL L G E GG GG SG Sbjct: 39 AAAAAAAERGEMKAAAGQESEGPAVGPPQ--PLGKELQ----DGAESNGGGGGGGAGSGG 92 Query: 272 AFGAAAML--AKGSWPPHPAAPS----------GGRPRGAASPPDLASSPRCP------- 312 GA L + G+ P PA + GG G +PP A++ P Sbjct: 93 GPGAEPDLKNSNGNAGPRPALNNNLTEPPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQ 152 Query: 313 ---REPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAAS--SCSSPAPCSPPESWGRQST 367 R P ++A A +V+ ++ G S AA + + P S + Sbjct: 153 PYGRSPSAVAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQY 212 Query: 368 ASSFVDSSL-----SAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSM 422 S + + S A+AL +GG G A A + PP S Sbjct: 213 NSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGS--KPPPSSSASASSSSSSFAQQR 270 Query: 423 TNLRGAEG----------------------SMRGARREPEEPEGAVAARAARGQGGRLPR 460 G G S AR P G + G G+ P Sbjct: 271 FGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPA 330 Query: 461 T-------GRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPL--- 510 AA + SG R S P SPGS+ PLA+ PS P+ Sbjct: 331 DMASQCWGAAAAAAAAAAASGGAQQR---SHHAPMSPGSSGGGGQPLARTPQPSSPMDQM 387 Query: 511 -RLEGSPPTRRDSGSSQSDDPSSSNKGY----------TPLREAGTSTESVLDAVAGQTR 559 ++ P + S Q PS +G+ TP R T A+ G + Sbjct: 388 GKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSY 447 Query: 560 DSAVAAPVLGAE---------------QSSPEGASQEPPTAEQP 588 + P G + Q SP Q+PP ++QP Sbjct: 448 TQQI--PPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQP 489 Score = 49.7 bits (117), Expect = 8e-06 Identities = 94/399 (23%), Positives = 134/399 (33%), Gaps = 65/399 (16%) Query: 220 AAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAML 279 AAAAA + SSS+SA +++ S+ Q R G GG G Sbjct: 243 AAAAAGSKPPPSSSASASSSSS----------SFAQQRF-----GAMGGGG--------- 278 Query: 280 AKGSWPPHPAAPSGGRPRGAASPP--DLASSPRCPREPPSLAEAVYSVYRERSGV----- 332 P+A GG P+ A+P L +SP R YS + G Sbjct: 279 --------PSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPA 330 Query: 333 --------AGSRRAAAATAAAAASSCSSPAPCSPPESWG------RQSTASSFVDSSLSA 378 A + AAAA A+ A S AP SP S G R SS +D + Sbjct: 331 DMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSPMDQ-MGK 389 Query: 379 FALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARRE 438 P GG + +G Q+ G G + MT A+ +M G Sbjct: 390 MRPQPY-GGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRYPMTMQGRAQSAMGGLSYT 448 Query: 439 PEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSS 498 + P + GQ G+ P + + ++ P + PPS P P S Sbjct: 449 QQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQP--PYSQQPPSQTPHAQPSYQQQPQS 506 Query: 499 PLAKAASPSPPLRLEGSPPTRRDSGS------SQSDDPSSSNKGYTPLREAGTSTESVLD 552 + S PP + S P + S + S + S Y+ + + Sbjct: 507 QPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQ 566 Query: 553 AVAGQTRDSAVAAPVLGAEQSSPEGASQE--PPTAEQPQ 589 A T A P ++QS SQ+ PP E Q Sbjct: 567 QPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPPPQELSQ 605 Score = 30.4 bits (67), Expect = 5.1 Identities = 78/319 (24%), Positives = 107/319 (33%), Gaps = 94/319 (29%) Query: 339 AAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDR---GGDAE 395 AA A AAASS +P P PP S +++ ++ A A + G + G ++E Sbjct: 2 AAQVAPAAASSLGNPPP--PPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESE 59 Query: 396 GASCSWQRPPGER----------------GSQEIPRGELDLSMTNLR------------- 426 G + +P G+ GS P E DL +N Sbjct: 60 GPAVGPPQPLGKELQDGAESNGGGGGGGAGSGGGPGAEPDLKNSNGNAGPRPALNNNLTE 119 Query: 427 ----GAEGSMRGARREPE--------------EPEG----AVAARAA----RGQGGRLPR 460 G GS G P +P G AVAA AA + GG+ + Sbjct: 120 PPGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQ--Q 177 Query: 461 TGRYAALRRRSTSGLPDYRAPP--------------------SPEPPPSPGSADPDSSPL 500 + AAL+ GL Y P S PPP+P A SSP Sbjct: 178 SPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYA--LSSP- 234 Query: 501 AKAASP-SPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTR 559 + +P S GS P S S+ S S + + + + G S AG Sbjct: 235 -RGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPS-------AAGGGT 286 Query: 560 DSAVAAPVLGAEQSSPEGA 578 A P L +SP A Sbjct: 287 PQPTATPTLNQLLTSPSSA 305 >gi|18702331 OTU domain containing 7A [Homo sapiens] Length = 926 Score = 55.5 bits (132), Expect = 1e-07 Identities = 68/266 (25%), Positives = 103/266 (38%), Gaps = 31/266 (11%) Query: 101 TANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTPPARAASPSSSSTSVGFFFRIFSGYL 160 +AN + S R + + +GA ST P+ +PS + + G G Sbjct: 548 SANGKNGDSAERGKEKKAKSRKGSKEESGASASTSPSEKTTPSPTDKAAGASPAEKGGGP 607 Query: 161 HSDKLKVFGPLIMGIGIFL--------FICANAVLHENRDKKTK------IINLRDLYST 206 D K + + + I FI A +L +R + + + + ++ +S Sbjct: 608 RGDAWKYSTDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQFHEEMIGYYLTSAQERFSA 667 Query: 207 VIDVHSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGC 266 R +D A AAAAAAAAAA+++ P +P+ S L LK Sbjct: 668 E---QEQRRRDAATAAAAAAAAAAATAKRPPRRPETEGVPVPERASPGPPTQLVLKLKER 724 Query: 267 GGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVY 326 G A G AA A G A+P GG R +AS P SP P ++V V Sbjct: 725 PSPGPAAGRAARAAAGG----TASPGGGARRASASGPVPGRSPPAPAR-----QSVIHVQ 775 Query: 327 RERSGVAGSRRAAAATAAAAASSCSS 352 +G+R A A A A C++ Sbjct: 776 -----ASGARDEACAPAVGALRPCAT 796 Score = 40.4 bits (93), Expect = 0.005 Identities = 91/368 (24%), Positives = 129/368 (35%), Gaps = 67/368 (18%) Query: 257 RGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPP 316 RG E K GS + GA+A + P PS ASP + PR Sbjct: 559 RGKEKKAKSRKGSKEESGASASTS----PSEKTTPSPTDKAAGASPAEKGGGPRGDAWKY 614 Query: 317 SLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSL 376 S + S+ R+ + G R+ A + + ++ S+ Sbjct: 615 S-TDVKLSLNILRAAMQGERKFIFAGLLLTSHRHQF-----------HEEMIGYYLTSAQ 662 Query: 377 SAFALLPLQGGRDRG----GDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGS- 431 F+ Q RD A A+ + +RPP ++ +P E R + G Sbjct: 663 ERFSAEQEQRRRDAATAAAAAAAAAAATAKRPPRRPETEGVPVPE--------RASPGPP 714 Query: 432 MRGARREPEEPE-GAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPP--- 487 + + E P G A RAAR G G A RR S SG R+PP+P Sbjct: 715 TQLVLKLKERPSPGPAAGRAARAAAGGTASPGGGA--RRASASGPVPGRSPPAPARQSVI 772 Query: 488 --PSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGT 545 + G+ D +P A P + P + S SSQS P+ + LR T Sbjct: 773 HVQASGARDEACAPAVGALRPC------ATYPQQNRSLSSQSYSPARA----AALRTVNT 822 Query: 546 STESVLDAVAGQTRDSAVAAPV-----------LGAEQSSPEGASQEPPTAEQ------- 587 ES+ AV G +A A GA + E A + PTA Sbjct: 823 -VESLARAVPGALPGAAGTAGAAEHKSQTYTNGFGALRDGLEFADADAPTARSNGECGRG 881 Query: 588 -PQPVQRQ 594 P PVQR+ Sbjct: 882 GPGPVQRR 889 >gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] Length = 904 Score = 54.7 bits (130), Expect = 3e-07 Identities = 75/323 (23%), Positives = 115/323 (35%), Gaps = 28/323 (8%) Query: 290 APSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASS 349 +PS PR P A+ P R P+ ++ + R V+ R + T Sbjct: 389 SPSASPPRRRHRPSPPATPPPKTRHSPTPQQS-NRTRKSRVSVSPGRTSGKVTKHKGTEK 447 Query: 350 CSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERG 409 SP+P P + +A ++ + R + + S S ER Sbjct: 448 RESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERP 507 Query: 410 SQE-IPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAAL- 467 + + GE+ R R A P + + + R R + P T R + Sbjct: 508 KRSHVKNGEV-----GRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPS 562 Query: 468 -----RRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGS----PPT 518 RRR T P R PSP P S S P+ + SPSPP + + PP Sbjct: 563 PAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPK 622 Query: 519 RRDSGS-------SQSDDPSSSNKGYTPLREAGTSTESVL-DAVAGQTRDSAVAAPVLGA 570 RR S S S S P + T R S++ + + TR++ P Sbjct: 623 RRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQP---N 679 Query: 571 EQSSPEGASQEPPTAEQPQPVQR 593 ++ SP + P T+ P PV+R Sbjct: 680 KRHSPSPRPRAPQTSSSPPPVRR 702 Score = 45.4 bits (106), Expect = 2e-04 Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 20/169 (11%) Query: 439 PEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSS 498 P++ V R + + + + R + S P+ R PSP P S+ P Sbjct: 641 PKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPP-- 698 Query: 499 PLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQT 558 P+ + AS SP R SP TR S++ +P K +P S +SV Sbjct: 699 PVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASP------SPQSV-------- 744 Query: 559 RDSAVAAPVLGAEQSSPEGASQEPPTAEQPQPVQRQFTNKEKLIMISRS 607 R + + V G SPE A+++PP P Q TN + + ++ Sbjct: 745 RRVSSSRSVSG----SPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKA 789 Score = 42.0 bits (97), Expect = 0.002 Identities = 46/181 (25%), Positives = 64/181 (35%), Gaps = 24/181 (13%) Query: 438 EPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAP---------------- 481 EP+EP ++ + + PR+ + R R+ S P + P Sbjct: 255 EPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRR 314 Query: 482 PSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLR 541 PSP PSP P P PP P RR SS S SSS+ + R Sbjct: 315 PSPRRRPSPRRRTPPRR------MPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSR 368 Query: 542 EAGTSTESVLDAVAGQTRD-SAVAAPVLGAEQSSPEGASQEPPTAEQPQPVQRQFTNKEK 600 + +TR S A+P + SP A+ P T P P Q T K + Sbjct: 369 SPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPP-ATPPPKTRHSPTPQQSNRTRKSR 427 Query: 601 L 601 + Sbjct: 428 V 428 Score = 42.0 bits (97), Expect = 0.002 Identities = 78/329 (23%), Positives = 106/329 (32%), Gaps = 76/329 (23%) Query: 285 PPHPAAPSGGRPRGAAS---PPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAA 341 PP A P+ S PP SSP R PSL+ S +R+ S + S R A + Sbjct: 620 PPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLS----SKHRKGSSPSRSTREARS 675 Query: 342 TAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSW 401 S SP P +P T+SS Sbjct: 676 PQPNKRHS-PSPRPRAP-------QTSSS------------------------------- 696 Query: 402 QRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRT 461 PP RG+ P+ + S R RR PE +AA + R Sbjct: 697 -PPPVRRGASSSPQRR--------QSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRV 747 Query: 462 GRYAALRRRSTSGLPDYRA-----PPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSP 516 RS SG P+ A PPSP SP + + P+ KA SP+P SP Sbjct: 748 SS-----SRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTP----SPSP 798 Query: 517 PTRRDSGSSQSDDPSSSNKGYT-----PLREAGTSTESVLDAVAGQTRDSAVAAPVLGAE 571 P D +K + + ++V A A +A+AA Sbjct: 799 PRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAAAAVTPAAIAAATTTLA 858 Query: 572 QSSPEGASQEPPTAEQPQPVQRQFTNKEK 600 Q P A + P E + + EK Sbjct: 859 QEEPVAAPE--PKKETESEAEDNLDDLEK 885 Score = 32.3 bits (72), Expect = 1.3 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Query: 102 ANSSSSGSKNRSRSHPRAPGGVNSSSAG-----APRSTPPARAASPSSSST 147 + SSSS S +RSRS P+ P SS +P ++PP R PS +T Sbjct: 356 SGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPAT 406 Score = 31.2 bits (69), Expect = 3.0 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 10/97 (10%) Query: 460 RTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSA--------DPDSSPLAKAASPSPPLR 511 R R +A S+S R+ P+ PP S+ P +SP + PSPP Sbjct: 347 RRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPP-- 404 Query: 512 LEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTE 548 P TR QS+ S +P R +G T+ Sbjct: 405 ATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTK 441 >gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] Length = 1464 Score = 54.3 bits (129), Expect = 3e-07 Identities = 84/323 (26%), Positives = 108/323 (33%), Gaps = 62/323 (19%) Query: 241 PPGAIPLNGFLSYVQSRGLELKPGGCG-----GSGDAFGAAAM--LAKGSWPPHPAAPSG 293 PPGA G + + +G +PG G G A G A A PP PA P+G Sbjct: 570 PPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAG 629 Query: 294 GRPR-------------GAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAA 340 R G A PP A P P L S R G G R Sbjct: 630 ERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQ- 688 Query: 341 ATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCS 400 P P P + G + D+ G ++GA Sbjct: 689 ----------GPPGPAGPRGANGAPGNDGAKGDA------------GAPGAPGSQGAP-G 725 Query: 401 WQRPPGERGSQEIPRGELDLSMTNLRGAEGS-----MRGARRE--PEEPEGAVAARAARG 453 Q PGERG+ +P + D +GA+GS +RG P P GA + G Sbjct: 726 LQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESG 785 Query: 454 QGGRLPRTGRYAALRRRSTSGLP---DYRAPPSPEPPP----SPGSADP--DSSPLAKA- 503 G TG A R G P + PP + P PG A D+ P A Sbjct: 786 PSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAG 845 Query: 504 -ASPSPPLRLEGSPPTRRDSGSS 525 A P P+ G+P + GS+ Sbjct: 846 PAGPPGPIGNVGAPGAKGARGSA 868 Score = 49.3 bits (116), Expect = 1e-05 Identities = 86/358 (24%), Positives = 117/358 (32%), Gaps = 40/358 (11%) Query: 238 AAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPR 297 A PG + G + G PG G SG + A A+G+ P P P Sbjct: 753 ADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGA-PGDRGEPGPPGPA 811 Query: 298 GAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCS 357 G A PP P EP + +G AG A A A Sbjct: 812 GFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGARGSA--G 869 Query: 358 PPESWGRQSTASSFVDSSLSAFALLP-------LQGGRDRGGDAEGASCSWQ----RPPG 406 PP + G A S A P +GG+ G+ A + PPG Sbjct: 870 PPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPGPPG 929 Query: 407 ERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAA 466 G + P + G +G + G R G V RG+ G G Sbjct: 930 PAGEKGSPGADGPAGAPGTPGPQG-IAGQR-------GVVGLPGQRGERGFPGLPGPSGE 981 Query: 467 LRRRSTSGLPDYRAPPSPEPPPS----PGSADPDSSPLAKAASPSPPLRLEGSPPTRRDS 522 ++ SG R PP P PP PG + + +P A+ SP +GSP + D Sbjct: 982 PGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAE-GSPG----RDGSPGAKGDR 1036 Query: 523 GSSQSDDP---SSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEG 577 G + P + P+ AG S + G+T + A PV P G Sbjct: 1037 GETGPAGPPGAPGAPGAPGPVGPAGKSGD------RGETGPAGPAGPVGPVGARGPAG 1088 Score = 45.8 bits (107), Expect = 1e-04 Identities = 90/390 (23%), Positives = 115/390 (29%), Gaps = 35/390 (8%) Query: 221 AAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLA 280 A A A + P G+ G G KPG G GD A Sbjct: 616 AGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGA 675 Query: 281 KGS----------WPPHPAAPSG--GRP--------RGAASPPDLASSPRCPREPPSLAE 320 +G PP PA P G G P GA P +P P Sbjct: 676 RGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGA 735 Query: 321 AVYSVYRERSGVAGSRRAAAATAAAAASSCSSP-APCSPPESWGRQSTASSFVDSSLSAF 379 A + G AG + A + + P P P + G + + + + Sbjct: 736 AGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGA 795 Query: 380 ALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARRE- 438 P DRG + PPG G D G G A Sbjct: 796 RGAP----GDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPG 851 Query: 439 PEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPE-PPPSPGSADP-- 495 P GA A+ ARG G TG A R G PP P P G P Sbjct: 852 PIGNVGAPGAKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRG 911 Query: 496 DSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVA 555 ++ P + PP G P + GS +D P+ + P AG L Sbjct: 912 ETGPAGRPGEVGPP----GPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQR 967 Query: 556 GQTRDSAVAAPVLGAEQSSPEGASQE--PP 583 G+ + P + P GAS E PP Sbjct: 968 GERGFPGLPGPSGEPGKQGPSGASGERGPP 997 Score = 43.1 bits (100), Expect = 8e-04 Identities = 66/247 (26%), Positives = 77/247 (31%), Gaps = 44/247 (17%) Query: 263 PGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAV 322 PG G G++ A A+GS P +P RG P +P P P + A Sbjct: 1003 PGLAGPPGESGREGAPGAEGS-PGRDGSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAG 1061 Query: 323 YSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALL 382 S R +G AG A + P P G + Sbjct: 1062 KSGDRGETGPAGP--------AGPVGPVGARGPAGPQGPRGDKGETGE------------ 1101 Query: 383 PLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEP 442 QG DRG Q PPG GS GE S GA G P P Sbjct: 1102 --QG--DRGIKGHRGFSGLQGPPGPPGSP----GEQGPS-----GASGPAG-----PRGP 1143 Query: 443 EGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAK 502 G+ A G G G R +G PP P PP P SA D S L Sbjct: 1144 PGSAGAPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSAGFDFSFL-- 1201 Query: 503 AASPSPP 509 P PP Sbjct: 1202 ---PQPP 1205 Score = 42.0 bits (97), Expect = 0.002 Identities = 87/337 (25%), Positives = 105/337 (31%), Gaps = 51/337 (15%) Query: 241 PPGAIPLNGFLSYVQSRGLELK-------PGGCGGSGD--------AFGAAAMLAKGSWP 285 PPG L G + S G + K PG G SG A G P Sbjct: 149 PPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPGEP 208 Query: 286 PHPAAPSGGRPRGAASPPDL------ASSPRCPRE--PPSLAEAVYSVYRERSGVAGSRR 337 P A PRG PP A P P E PP A +G+ G + Sbjct: 209 GEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGA--RGLPGTAGLPGMKG 266 Query: 338 AAAATAAAAASSCSSPA-PCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRD--RGGDA 394 + A + PA P P S G L P G RG D Sbjct: 267 HRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDG 326 Query: 395 EGASCSWQRPPGERGSQEIP-----RGELDLSMTNLRGAEGSMRGARREPEEPEGAVAAR 449 + P G G P +GE RG+EG +G R EP P A AA Sbjct: 327 ATGAAGPPGPTGPAGPPGFPGAVGAKGEA--GPQGPRGSEGP-QGVRGEPGPPGPAGAAG 383 Query: 450 AARGQG--GRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPS 507 A G G+ G A G P R P P+ P P P K S Sbjct: 384 PAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGP--------PGPKGNSGE 435 Query: 508 PPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAG 544 P G+P ++ D+G+ P P E G Sbjct: 436 P-----GAPGSKGDTGAKGEPGPVGVQGPPGPAGEEG 467 Score = 33.9 bits (76), Expect = 0.46 Identities = 84/353 (23%), Positives = 104/353 (29%), Gaps = 47/353 (13%) Query: 241 PPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAA 300 P GA L G +G G G GDA A GS P AP PRG Sbjct: 249 PQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGS-PGENGAPGQMGPRGL- 306 Query: 301 SPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPA-PCSPP 359 P P P G AG+R AT AA + PA P P Sbjct: 307 --PGERGRPGAP------------------GPAGARGNDGATGAAGPPGPTGPAGPPGFP 346 Query: 360 ESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELD 419 + G + A QG R G A + P G G+ P + Sbjct: 347 GAVGAKGEAGPQGPRGSEG-----PQGVRGEPGPPGPAGAAG--PAGNPGADGQPGAKGA 399 Query: 420 LSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYR 479 + GA G GAR P P+G +G G G + G + Sbjct: 400 NGAPGIAGAPG-FPGARG-PSGPQGPGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQ 457 Query: 480 APPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSG----------SSQSDD 529 PP P A + P P PP G P +R G + + Sbjct: 458 GPPGPAGEEGKRGARGEPGP---TGLPGPPGE-RGGPGSRGFPGADGVAGPKGPAGERGS 513 Query: 530 PSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEP 582 P + +P EAG E+ L G T P P G P Sbjct: 514 PGPAGPKGSP-GEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRP 565 Score = 33.5 bits (75), Expect = 0.60 Identities = 84/347 (24%), Positives = 113/347 (32%), Gaps = 32/347 (9%) Query: 258 GLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPS 317 GL PG GG G A G P P+G RG+ P SP P Sbjct: 479 GLPGPPGERGGPGSRGFPGADGVAG-----PKGPAG--ERGSPGPAGPKGSPGEAGRP-- 529 Query: 318 LAEAVYSVYRERSGVAGSRRAAAATAAAA-ASSCSSPAPCSPPESWGRQSTASSFVDSSL 376 EA + +G GS T A P P PP + G Q+ F Sbjct: 530 -GEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARG-QAGVMGFPGPKG 587 Query: 377 SAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGS--MRG 434 +A P + G +RG + GE G+Q P +G GS +G Sbjct: 588 AAGE--PGKAG-ERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQG 644 Query: 435 ARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSAD 494 P P G +G G L G A R G + PP P P A Sbjct: 645 LPG-PAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAP 703 Query: 495 PDSSPLAKAASPSPP-----LRLEGSPPTRRDSG--SSQSDDPSSSNKGY--TPLREA-- 543 + A +P P L+G P R +G + D + KG +P ++ Sbjct: 704 GNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVR 763 Query: 544 GTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQPQP 590 G + AG D + P + + P GA P +P P Sbjct: 764 GLTGPIGPPGPAGAPGDKGESGP---SGPAGPTGARGAPGDRGEPGP 807 Score = 29.6 bits (65), Expect = 8.6 Identities = 46/196 (23%), Positives = 60/196 (30%), Gaps = 37/196 (18%) Query: 412 EIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRS 471 E+P GE + G+E E P+G R RG G R G Sbjct: 85 EVPEGECCPVCPD--GSESPTDQETTGVEGPKGDTGPRGPRGPAGPPGRDG--------- 133 Query: 472 TSGLPDYRAPPSPEPPPSPGSADPDSSP---------------LAKAASPSPPLRLEGSP 516 G P PP P PP P + +P + PS P L G P Sbjct: 134 IPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPP 193 Query: 517 ----PTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQ 572 P + +P +S P G ++ D AG+ P Sbjct: 194 GAPGPQGFQGPPGEPGEPGASGP-MGPRGPPGPPGKNGDDGEAGKPGRPGERGP------ 246 Query: 573 SSPEGASQEPPTAEQP 588 P+GA P TA P Sbjct: 247 PGPQGARGLPGTAGLP 262 >gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 855 Score = 54.3 bits (129), Expect = 3e-07 Identities = 100/424 (23%), Positives = 150/424 (35%), Gaps = 67/424 (15%) Query: 220 AAAAAAAAAAASSSSSAPAAAPPG------AIPLN----GFLSYVQSRGLELKPGGCGGS 269 +A A +A +SS PA+ PP A P G +S +PG G Sbjct: 73 SAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQK 132 Query: 270 GDAFGAAAMLAKG--SWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAV----- 322 G A +A+G + P +A S G R + P SP R + V Sbjct: 133 GLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRP 192 Query: 323 YSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALL 382 R R G R++ ++ + + + S A P G Q AS + SS + + Sbjct: 193 APSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSP 252 Query: 383 PLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEP 442 G RG A S +P +G Q + ++ + A G + + P Sbjct: 253 ARSGPSARGTPRAPAHPSQPKP---KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSP 309 Query: 443 EGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPS------PGSADPD 496 A+ ++A LP T ++L + + LP APPSP PPS P + P Sbjct: 310 SAALQSQAPP----TLPATPHSSSLTCQLATPLP--LAPPSPSAPPSLQTLPSPPATPPS 363 Query: 497 -------------------SSPLAKAASPSP---------PLRLEGSPPTRRDSGSSQSD 528 S PL+ A+P P PL+ SPP + Sbjct: 364 QATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATP 423 Query: 529 DPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQP 588 P + N L +A S + Q S A+P + + P SQ PP+ P Sbjct: 424 SPQAPNALAVHLLQAPFSPP---PSPPVQAPFSPPASPPVSPSATPP---SQAPPSLAAP 477 Query: 589 QPVQ 592 P+Q Sbjct: 478 -PLQ 480 Score = 52.8 bits (125), Expect = 1e-06 Identities = 106/427 (24%), Positives = 150/427 (35%), Gaps = 58/427 (13%) Query: 216 KDLAAAAAAAAAAAASS----------SSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGG 265 +D A A AAA AA + S P P A+ + G V + L + GG Sbjct: 5 RDKAKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGG 64 Query: 266 CGGS---GDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSP---------RCPR 313 GG+ A A + G+ +PA+ RG +PP +SP Sbjct: 65 IGGATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTT 124 Query: 314 EPPSLAEAVYSVYRERSGVAGSRRAA---AATAAAAASSCSSPAPCSPPESWGRQSTAS- 369 P L + + E + G A +A +A A S P P +P + R+S A+ Sbjct: 125 RPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAG 184 Query: 370 ---SFVDSSLSAFALLPLQGGRDRGGDA------EGASCSWQRPPGERGSQEIPRGELDL 420 + SA P +G R A E + + +RP G Q L Sbjct: 185 TEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSS 244 Query: 421 SMTNLRG---AEGSMRGARREPEEPE--GAVAARAARGQGGRLPRTGRYAALRRRSTSGL 475 S T L + S RG R P P +A R PR AL S+S L Sbjct: 245 SATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPL 304 Query: 476 --PDYRAPPSPEPPPSPGSADPDSSPLAKAASP---SPPLRLEGSPPTRRDSGSSQSDDP 530 P A + PP+ + SS + A+P +PP +PP+ + S + P Sbjct: 305 ATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPP--SPSAPPSLQTLPSPPATPP 362 Query: 531 SSSNKGY-TPLREAGTSTESVLD-------AVAGQTRDSAVAAPVLGAEQSSPEGASQEP 582 S + +P +A T S L A A+A P L A S P P Sbjct: 363 SQATTSLGSPTLQA---THSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSP 419 Query: 583 PTAEQPQ 589 PQ Sbjct: 420 LATPSPQ 426 Score = 40.8 bits (94), Expect = 0.004 Identities = 132/556 (23%), Positives = 190/556 (34%), Gaps = 86/556 (15%) Query: 77 KATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTPP 136 +A GT E G P + R PT S S + + +P SAG P Sbjct: 181 RAAGT--EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPA 238 Query: 137 ARAASPSSSSTSVGFFFRIFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTK 196 +R S SSS+T + R GP G A H ++ K Sbjct: 239 SR--SLSSSATPLSSPARS-------------GPSARGT-------PRAPAHPSQPKPKG 276 Query: 197 IINLRDLYSTVIDVHSLRAKD-LAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQ 255 + LR T + A L+++ A + +A+ S AP P A P + L+ Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLP--ATPHSSSLTCQL 334 Query: 256 SRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAA------SPP--DLAS 307 + L L P + + + PP A S G P A SPP LA+ Sbjct: 335 ATPLPLAPPSPSAPPSL---QTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLAT 391 Query: 308 SPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSS----PAPCSPPESWG 363 P P+ PP+LA + + S A + AT + A + + AP SPP S Sbjct: 392 PP--PQAPPALA--LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPP 447 Query: 364 RQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMT 423 Q+ S +S A P Q A+ Q PP S + Sbjct: 448 VQAPFSPPASPPVSPSATPPSQAPPSL------AAPPLQVPPSPPASPPMSPSATPPPQA 501 Query: 424 NLRGAEGSMRGARREPEEPEGAVAA--RAARGQGGRLPRTGRYAALRRRSTSGL--PDYR 479 A ++ A+ P+ P +A P ++ S L P + Sbjct: 502 PPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ 561 Query: 480 APP--------------------SPEPPPSPGSADPDSSP-LAKAASPSPPLRLEGSPPT 518 APP +P PP+PG S P L A +P PP PP+ Sbjct: 562 APPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP-----PPPS 616 Query: 519 RRDSGSSQSDDPS--SSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAA--PVLGAEQSS 574 R S + D + SS+ TP G + A A D+ +AA P + + Sbjct: 617 RSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSRGPA 676 Query: 575 PEGASQEPPTAEQPQP 590 P A + P A P P Sbjct: 677 PPLAFRGAPGAPLPWP 692 Score = 37.7 bits (86), Expect = 0.032 Identities = 92/360 (25%), Positives = 121/360 (33%), Gaps = 78/360 (21%) Query: 275 AAAMLAKGSWPPHPAAPSGGRP------RGAASPPDLASSPRCPREPPSLAEAVYSVYRE 328 A+ ++ + PP A PS P ASPP S+ P+ PP LA + + Sbjct: 456 ASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK- 514 Query: 329 RSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGR 388 A A ++ A SPP S+ Q+ S +S A P Q Sbjct: 515 ----------PPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPP 564 Query: 389 DRGG------DAEGASCSWQRP-----PGERGSQEIPRGELDLS-----------MTNLR 426 + AS + Q P PG S PR L L+ + L Sbjct: 565 VLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLS 624 Query: 427 GAE--GSMRGARREPEE-------PEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLP- 476 G + G A PEE PEG AA P AA + S P Sbjct: 625 GPDLAGHSSSATSTPEELRGYDSGPEGGAAASP--------PPDAELAACHPAAWSRGPA 676 Query: 477 ---DYR-APPSPEP-PPS--PGSAD----------PDS-SPLAKAASPSPPLRLEGSPPT 518 +R AP +P P PP+ PGSAD P+S +P A P P G Sbjct: 677 PPLAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPGTSGGKAA 736 Query: 519 RRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGA 578 + S P + G PL G SV+ + +T A A G P GA Sbjct: 737 AGAGAGASSRSPKQARLGELPL---GALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGA 793 Score = 30.8 bits (68), Expect = 3.9 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 6/59 (10%) Query: 224 AAAAAAASSSSSAPAAAPPGAIPLNGF----LSYVQSRGLEL--KPGGCGGSGDAFGAA 276 AAA A A +SS +P A G +PL + ++ SR L L G GGSG G A Sbjct: 735 AAAGAGAGASSRSPKQARLGELPLGALQASVVQHLLSRTLLLAAAEGAAGGSGGGPGGA 793 >gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] Length = 1838 Score = 53.1 bits (126), Expect = 7e-07 Identities = 87/379 (22%), Positives = 114/379 (30%), Gaps = 37/379 (9%) Query: 241 PPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPR-GA 299 PPG + L G PG G G+ M G PP P PSG G Sbjct: 1223 PPGPVGLQGL------------PGPPGEKGETGDVGQMGPPG--PPGPRGPSGAPGADGP 1268 Query: 300 ASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSP-APCSP 358 PP +P E EA G G + + S + P P P Sbjct: 1269 QGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGP 1328 Query: 359 PESWGRQSTASSFVDSSLSAFALLPLQGGRD-----RGGDAEGASCSWQRPPGERGSQEI 413 P G + + P G+D +G D E P GE G Sbjct: 1329 PGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGP 1388 Query: 414 PRGELDLSMTNLRGAEGSMRGARRE-----PEEPEGAVAARAARGQGGRLPRTGRYAALR 468 P G +G +GA+ E P G + + A G+ G G + Sbjct: 1389 PGKRGPPGPAGPEGRQGE-KGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVG 1447 Query: 469 RRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSD 528 + G P PP P PP DS P + P + L G P + + G Sbjct: 1448 EQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPG-LIGLIGPPGEQGEKGDRGLP 1506 Query: 529 DPSSSN-----KGYT----PLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGAS 579 P S+ +G T P+ G G S P A P G Sbjct: 1507 GPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHPGPPGPP 1566 Query: 580 QEPPTAEQPQPVQRQFTNK 598 P QP P+Q T + Sbjct: 1567 GPPGEVIQPLPIQASRTRR 1585 Score = 38.1 bits (87), Expect = 0.024 Identities = 82/380 (21%), Positives = 108/380 (28%), Gaps = 56/380 (14%) Query: 241 PPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSW-PPHPAAPSG-GRPRG 298 P GAI G + GL PG G G KG PP P P G PRG Sbjct: 734 PQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRG 793 Query: 299 AASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSP----- 353 + E E + ++ G+ G R P Sbjct: 794 VKGADGIRGLKGTKGEK---GEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGG 850 Query: 354 -----APCSPPESWG------------RQSTASSFVDSSLSAFALLPLQGGRDRGGDAEG 396 P PP G RQ S F P G G G Sbjct: 851 PNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSI------GFPGFPGANGEKGGRGTPG 904 Query: 397 ASCSWQRPPGERGSQEIPRGELD-LSMTNLRGAEGSMRG-------ARREPEEPEGAVAA 448 P G+RG PRGE +T G +G+ G R P P+G Sbjct: 905 KP----GPRGQRGPTG-PRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGF 959 Query: 449 RAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSP 508 +G G + G +R +G PP P P ++ P+ + P P Sbjct: 960 PGPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGP 1019 Query: 509 PLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVL 568 P PP + + + + G AG + + G D + PV Sbjct: 1020 P-----GPPGEQGLPGLAGKEGTKGDPG-----PAGLPGKDGPPGLRGFPGDRGLPGPVG 1069 Query: 569 GAEQSSPEGASQEPPTAEQP 588 EG P A P Sbjct: 1070 ALGLKGNEGPPGPPGPAGSP 1089 Score = 35.8 bits (81), Expect = 0.12 Identities = 89/391 (22%), Positives = 120/391 (30%), Gaps = 65/391 (16%) Query: 234 SSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGD-AFGAAAMLAKGSWPPHPAAPS 292 +S+P+ PG +P N Y G+ G G G+ A ML +G PP P P+ Sbjct: 424 TSSPSEIGPG-MPANQDTIY---EGIGGPRGEKGQKGEPAIIEPGMLIEG--PPGPEGPA 477 Query: 293 G--------------GRP--RGAASPPDLASSPRCPREPPSL----------------AE 320 G G P RG P L + P P ++ Sbjct: 478 GLPGPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGP 537 Query: 321 AVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFA 380 V + + + R A A P P PP S G + Sbjct: 538 MVSAQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQ 597 Query: 381 LLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPE 440 P G+ G S + PG+ G P+G D L G G +G R +P Sbjct: 598 GPPGPAGKP-GRRGRAGSDGARGMPGQTG----PKG--DRGFDGLAGLPGE-KGHRGDPG 649 Query: 441 EPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSP- 499 P G G+ G G GL + PP P PP D P Sbjct: 650 -PSGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPK 708 Query: 500 --LAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQ 557 + P PP + +G+P + G + P KG PL + G D G Sbjct: 709 GNVGPQGEPGPPGQ-QGNPGAQGLPGPQGAIGP-PGEKG--PLGKPGLPGMPGADGPPGH 764 Query: 558 TRDSAVAAPVLGAEQSSPEGASQEPPTAEQP 588 G E E Q PP + P Sbjct: 765 P----------GKEGPPGEKGGQGPPGPQGP 785 Score = 34.3 bits (77), Expect = 0.35 Identities = 68/306 (22%), Positives = 93/306 (30%), Gaps = 83/306 (27%) Query: 239 AAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGR--- 295 A PG G + RGL PG G G L PP P P+G Sbjct: 1044 AGLPGKDGPPGLRGFPGDRGL---PGPVGALG--------LKGNEGPPGPPGPAGSPGER 1092 Query: 296 -PRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPA 354 P GAA P + P P+ PP A + G G + A PA Sbjct: 1093 GPAGAAGPIGIPGRPG-PQGPPGPAGE-----KGAPGEKGPQGPAGRDGLQGPVGLPGPA 1146 Query: 355 -PCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEI 413 P PP G D+G E PG++GS+ Sbjct: 1147 GPVGPPGEDG-------------------------DKGEIGE---------PGQKGSKG- 1171 Query: 414 PRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTS 473 +GE +G G P P+G + G G G+ ++ Sbjct: 1172 DKGE--------QGPPG--------PTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDE 1215 Query: 474 GLPDYRAPPSP---EPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDP 530 G + PP P + P P ++ + + P P P R SG+ +D P Sbjct: 1216 GPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGP-------PGPRGPSGAPGADGP 1268 Query: 531 SSSNKG 536 G Sbjct: 1269 QGPPGG 1274 >gi|110556636 tankyrase 1-binding protein 1 [Homo sapiens] Length = 1729 Score = 53.1 bits (126), Expect = 7e-07 Identities = 95/397 (23%), Positives = 147/397 (37%), Gaps = 67/397 (16%) Query: 217 DLAAAAAAAAAAAASS----SSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDA 272 DLA AA++ A S SS AP++ G S GL P GSG Sbjct: 254 DLAKAASSELPADISKPWIPSSPAPSSENGGPA----------SPGL---PAEASGSGPG 300 Query: 273 FGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGV 332 + PP ++P + A +P +SP CP PS A Sbjct: 301 -------SPHLHPPDKSSPCHSQLLEAQTPEASQASP-CPAVTPSAPSAALPD------- 345 Query: 333 AGSRRAAAATAAAAASSCSSPAPCSPP----ESWGRQSTASSFVDSSLSAFALLPLQGGR 388 GSR + A + +P P SPP E ++ + LL L Sbjct: 346 EGSRHTPSPGLPAEGAP-EAPRPSSPPPEVLEPHSLDQPPATSPRPLIEVGELLDLTRTF 404 Query: 389 DRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAA 448 GG+ E + RP S+ R +EG ++ ++ E+ G++AA Sbjct: 405 PSGGEEEAKGDAHLRPT---------------SLVQRRFSEGVLQSPSQDQEKLGGSLAA 449 Query: 449 RAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPE---------PPPSPGSADPDSSP 499 +GQG +L + A S S ++ P P PPPSP + +++ Sbjct: 450 -LPQGQGSQLALDRPFGAESNWSLSQSFEWTFPTRPSGLGVWRLDSPPPSPITEASEAAE 508 Query: 500 LAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTP----LREAGTSTESVLDAVA 555 A+A + + R EG + +GS+ S SS +G P ++ ++ AV Sbjct: 509 AAEAGNLAVSSREEGVSQQGQGAGSAPSGSGSSWVQGDDPSMSLTQKGDGESQPQFPAVP 568 Query: 556 GQTRDSAVAAPVLGAEQSSPEGASQEPPTA-EQPQPV 591 + + P L +Q+ SQEP E P P+ Sbjct: 569 LEPLPTTEGTPGLPLQQAEERYESQEPLAGQESPLPL 605 Score = 39.3 bits (90), Expect = 0.011 Identities = 68/258 (26%), Positives = 90/258 (34%), Gaps = 33/258 (12%) Query: 225 AAAAAASSSSSAPAAAPPGAIPLNGFLSY-VQSRG-LELKPGGCGGSGDAFGAAAMLAKG 282 A + A + P + NG LS +++R LE + G G + + Sbjct: 1358 APSEAREHGVGGVSQCPEPGLRHNGSLSPGLEARDPLEARELGVGETSGPETQGEDYSSS 1417 Query: 283 SWPPHPAAPSGGRPRGAASPPDLASSPRCPREPP--------------SLAEAVYSVYRE 328 S PHPA P G G A AS RCP PP S ++AV Sbjct: 1418 SLEPHPADP--GMETGEALSFG-ASPGRCPARPPPSGSQGLLEEMLAASSSKAVARRESA 1474 Query: 329 RSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQ----STASSFVDSSLSAFALLPL 384 SG+ G A A AA P SPP SW Q ++ + VD + + A Sbjct: 1475 ASGLGGLLEEEGAGAGAAQEEVLEPGRDSPP-SWRPQPDGEASQTEDVDGTWGSSA---- 1529 Query: 385 QGGRDRGGDAEGASCSWQRPPGERGSQEIPRGE----LDLSMTNLRGAEGSMRGARREPE 440 G A+ + Q PP SQ+ E LD +M R G RG R Sbjct: 1530 -ARWSDQGPAQTSRRPSQGPPARSPSQDFSFIEDTEILDSAMYRSRANLGRKRGHRAPVI 1588 Query: 441 EPEGAVAARAARGQGGRL 458 P G + A L Sbjct: 1589 RPGGTLGLSEAADSDAHL 1606 >gi|102469037 jun D proto-oncogene [Homo sapiens] Length = 347 Score = 52.8 bits (125), Expect = 1e-06 Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 11/117 (9%) Query: 209 DVHSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAI-PLNGFLSYVQSRGLELKPGGCG 267 D+H AAAAAAAAAA S +A +APPG + P L GG G Sbjct: 146 DLHKQNQLGAGAAAAAAAAAAGGPSGTATGSAPPGELAPAAAAPEAPVYANLSSYAGGAG 205 Query: 268 GSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLAS---SPRCPREPPSLAEA 321 G+G A A +PP P P GA PP LA+ P+ + PS E+ Sbjct: 206 GAGGAATVAFAAEPVPFPPPP-------PPGALGPPRLAALKDEPQTVPDVPSFGES 255 Score = 34.3 bits (77), Expect = 0.35 Identities = 31/92 (33%), Positives = 37/92 (40%), Gaps = 20/92 (21%) Query: 268 GSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYR 327 G+G A AAA A G PSG G+A P +LA + P P VY Sbjct: 154 GAGAAAAAAAAAAGG--------PSG-TATGSAPPGELAPAAAAPEAP---------VYA 195 Query: 328 ERSGVAGSRRAAAATAAAAASSCSSPAPCSPP 359 S AG A A AA + + P P PP Sbjct: 196 NLSSYAGG--AGGAGGAATVAFAAEPVPFPPP 225 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 52.8 bits (125), Expect = 1e-06 Identities = 80/355 (22%), Positives = 120/355 (33%), Gaps = 44/355 (12%) Query: 226 AAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGC-----GGSGDAFGAAAMLA 280 A + + + PAA PP G L+ +G P GG A Sbjct: 1187 ATPSPKGAPTTPAATPPSP---KGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTT 1243 Query: 281 KGSWPPHP-AAPSGGRPRGA-----ASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAG 334 + PP P P+ P+GA A+PP L P + AV + + G A Sbjct: 1244 PAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPAT 1303 Query: 335 SRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDA 394 S A T AA +P +PP T + S LP +GG Sbjct: 1304 SPPKGAPTPPAATPPSPKGSPGTPPPKGA--PTPPAVTPPSPKGTPTLPATTPSSKGGPT 1361 Query: 395 EGASCSWQRPPGERGSQE------IPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAA 448 +S PP S + P + ++ + +G S P++ Sbjct: 1362 TPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVT 1421 Query: 449 R---AARGQGGRLPRTGRYAALRRR-------------STSGLPDYRA--PPSPEPPPSP 490 R A +G P +L++ S+ G P A PPSP+ PP+P Sbjct: 1422 REGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAP 1481 Query: 491 GSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGT 545 SSP A+P+P G+P SS + P++ + P+ T Sbjct: 1482 KQVATSSSPKKAPATPAP----MGAPTLPAVIPSSPKEVPATPSSRRDPIAPTAT 1532 Score = 50.4 bits (119), Expect = 5e-06 Identities = 91/398 (22%), Positives = 133/398 (33%), Gaps = 61/398 (15%) Query: 219 AAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAM 278 A A A + +SS A A P IP + + P GG A Sbjct: 904 APKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAP 963 Query: 279 LAKGSWPPHP-AAPSGGRPRGAASPPDLASSPRCPREPPSLAE--------AVYSVYRER 329 + PP P P+ P+GA +PP A++P P+ P+ AV + Sbjct: 964 TPPAATPPSPKGGPATPSPKGAPTPP--AATPPSPKGGPATPSPKGAPTPPAVTPPSPKG 1021 Query: 330 SGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGG-- 387 S A A+T AA +P + P G +T ++ + S A L+G Sbjct: 1022 SPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPT 1081 Query: 388 -------RDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPE 440 +GG A + PP + P+G L +G+ P Sbjct: 1082 PPAATPPSPKGGPATPSPKGAPMPPA--ATPPSPKGGLATPPH-----KGAPTTPAATPP 1134 Query: 441 EPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGL---PDYRAPPSPEP-PPSP----GS 492 P+G +A +G P T AA GL P AP +P PPSP + Sbjct: 1135 SPKGGLATPPPKGA----PTTP--AATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT 1188 Query: 493 ADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLD 552 P +P AA+P P +P + + + PS TP + +T + Sbjct: 1189 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA--- 1245 Query: 553 AVAGQTRDSAVAAPVLGAEQSSPEGASQEPPTAEQPQP 590 A SP+G PP P P Sbjct: 1246 -----------------ATPPSPKGGPATPPPKGAPTP 1266 Score = 43.5 bits (101), Expect = 6e-04 Identities = 96/413 (23%), Positives = 140/413 (33%), Gaps = 56/413 (13%) Query: 225 AAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSW 284 AA +S+ PAA PP P + +G P S A L Sbjct: 1024 AATPFPKGASTPPAATPPS--PKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPT 1081 Query: 285 PPH--PAAPSGG----RPRGAASPPDLASSPRCPR----EPPSLAEAVYSVYRERS---G 331 PP P +P GG P+GA PP A++P P+ PP S G Sbjct: 1082 PPAATPPSPKGGPATPSPKGAPMPP--AATPPSPKGGLATPPHKGAPTTPAATPPSPKGG 1139 Query: 332 VA-----GSRRAAAATAAAAASSCSSPAP--------CSPPESWGRQSTASSFVDSSLSA 378 +A G+ AAT + ++P P +PP G +T S + A Sbjct: 1140 LATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA 1199 Query: 379 FALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARRE 438 +GG + PP +G P + + T S +G Sbjct: 1200 ATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKG--APTTPAATPPSPKGGPAT 1257 Query: 439 PEEPEGAVAARAA-----RGQGGRLPRTG--RYAALRRRSTSGLPDYRAP-----PSPEP 486 P P+GA AA +G P G A + S G P P P Sbjct: 1258 PP-PKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAAT 1316 Query: 487 PPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTS 546 PPSP P + P +P+PP +PP+ + + + + PSS TP + G + Sbjct: 1317 PPSP-KGSPGTPP--PKGAPTPP---AVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPT 1370 Query: 547 TESVLDAVAG---QTRDSAVAAPVLGAEQSSPEGASQEP--PTAEQPQPVQRQ 594 + + G T S P + + + P + P P PV R+ Sbjct: 1371 PPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTRE 1423 Score = 40.0 bits (92), Expect = 0.006 Identities = 70/319 (21%), Positives = 114/319 (35%), Gaps = 61/319 (19%) Query: 286 PHPAAPSGG--RPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATA 343 P +AP GG P P A +P P+EPP+ + S + ++A A A Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATS--------SSPKKAPATPA 1498 Query: 344 AAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQR 403 A + + P SP E +P R A A+ ++ Sbjct: 1499 PMGAPTLPAVIPSSPKE---------------------VPATPSSRRDPIAPTATLLSKK 1537 Query: 404 PPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGR 463 P +E L + A P+E +++ A P T + Sbjct: 1538 TPATLAPKEA------LIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYK 1591 Query: 464 YAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSG 523 A + +P PSP+ P+P + P SP A+P+P +G+P + + Sbjct: 1592 GAPSPKELL--IPPAVTSPSPKEAPTPPAVTP-PSPEKGPATPAP----KGTPTSPPVTP 1644 Query: 524 SSQSDDPSS--------------SNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLG 569 SS D P+S ++KG P ++ T+ + VL A A ++ + AP Sbjct: 1645 SSLKDSPTSPASVTCKMGATVPQASKG-LPAKKGPTALKEVLVAPAPES-TPIITAPTRK 1702 Query: 570 AEQSSPEGASQEPPTAEQP 588 Q+ A+ PP P Sbjct: 1703 GPQTKKSSAT-SPPICPDP 1720 Score = 37.0 bits (84), Expect = 0.054 Identities = 47/166 (28%), Positives = 63/166 (37%), Gaps = 33/166 (19%) Query: 439 PEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSS 498 P E GA A +++G T Y A S S L +P + PP GSA PD + Sbjct: 771 PTEDSGASATASSKG-------TLTYLA---DSPSPLGVSVSPQTKRPPTKKGSAGPD-T 819 Query: 499 PLAKAASPSPPLRLEGSPPT------RRDSGSSQSDDPSSSNKG------YTPLREAG-- 544 P+ +SP P+ P +DS ++ S KG TPL G Sbjct: 820 PIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVT 879 Query: 545 -----TSTESVLD---AVAGQTRDSAVAAPVLGAEQSSPEGASQEP 582 T T SV++ G + AP L SSP+ A P Sbjct: 880 LPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATP 925 Score = 36.6 bits (83), Expect = 0.071 Identities = 120/578 (20%), Positives = 188/578 (32%), Gaps = 94/578 (16%) Query: 76 PKAT-GTNREGGKQLPPAGS------SHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSA 128 PK + GT G PPA + + +P T SS G S P S Sbjct: 1320 PKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHK 1379 Query: 129 GAPRSTPPARAASPSSSSTSVGFFFRIFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLH 188 G P TPP+ P+ + S K P ++ + A V Sbjct: 1380 GGPAMTPPSPKRGPA----------------IPSPKGDPTSPAVIPLSP-KKAPATPVTR 1422 Query: 189 ENRDKKTKIINLRDLYSTVIDVHSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLN 248 E +K DL A + + ++SAP P A P Sbjct: 1423 EGAATPSK-------------------GDLTPPAVTPVSLKKAPATSAPKGGP--ATP-- 1459 Query: 249 GFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGA--------A 300 S+G P S A +A S P AP+ P GA + Sbjct: 1460 ------SSKGDPTLPAVTPPSPKEPPAPKQVATSSSP--KKAPATPAPMGAPTLPAVIPS 1511 Query: 301 SPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPE 360 SP ++ ++P R+P +A + ++ + A A S +PA +P E Sbjct: 1512 SPKEVPATPSSRRDP--IAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKE 1569 Query: 361 SWGRQS----------TASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGS 410 + S T S++ + L+P +A P + + Sbjct: 1570 APATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPA 1629 Query: 411 QEIPRGELDLSMTNLRGAEGSMRGARREPEE---PEGAVAARAARGQGGRLPRTGRYAAL 467 P+G + T+ S++ + P GA +A++G + T L Sbjct: 1630 TPAPKG----TPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVL 1685 Query: 468 RRRSTSGLPDYRAPPSPEPPPSPGSAD-----PDSSPLAKAASPSPPLRLEGSP--PTRR 520 + P AP P SA PD P AK S P + +P P ++ Sbjct: 1686 VAPAPESTPIITAPTRKGPQTKKSSATSPPICPD--PSAKNGSKGPLSTVAPAPLLPVQK 1743 Query: 521 DSG-SSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSPEGAS 579 DS +++ D S S KG PL + + L A A + + + A S P Sbjct: 1744 DSSKTAKGKDASHSPKG--PLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLP 1801 Query: 580 QEPPTAEQPQPVQRQFTNKEKLIMISRSHAIGVEEELE 617 P P Q+ + L++ S S + +E E Sbjct: 1802 LAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDE 1839 Score = 30.4 bits (67), Expect = 5.1 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 2/73 (2%) Query: 76 PKATGTNREGGKQLP-PAGSSHRVPTTANSSSSGSKNRS-RSHPRAPGGVNSSSAGAPRS 133 P AT + +GG P P G+ T S G S + P P S G P + Sbjct: 1198 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPAT 1257 Query: 134 TPPARAASPSSSS 146 PP A +P +++ Sbjct: 1258 PPPKGAPTPPAAT 1270 Score = 30.4 bits (67), Expect = 5.1 Identities = 75/356 (21%), Positives = 123/356 (34%), Gaps = 43/356 (12%) Query: 288 PAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAA 347 PA PS + A+SPP A +P + PS E + + A T + Sbjct: 1571 PATPSS---KEASSPP--AVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPE 1625 Query: 348 SSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGR----DRGGDAEGASCSWQR 403 ++PAP P S T SS DS S ++ G +G A+ + + Sbjct: 1626 KGPATPAPKGTPTS--PPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKE 1683 Query: 404 --------------------PPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPE 443 P ++ S P D S N G++G + P P Sbjct: 1684 VLVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKN--GSKGPLSTVAPAPLLPV 1741 Query: 444 GAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKA 503 +++ A+G+ G A ++++ L A + P P SA ++P Sbjct: 1742 QKDSSKTAKGKDASHSPKGPLAPPESKASTPLT---AAAFEKVLPKPESASVSAAPSPPV 1798 Query: 504 ASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAV 563 + P P + PP ++ SS S +K P E + +L + + V Sbjct: 1799 SLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKPLAPADE-----DELLPLIPPEPISGGV 1853 Query: 564 AAPVLGAEQSSPEGASQEPPTAEQPQPVQRQFTNKEKLIMISRSHAIGVEEELEST 619 + +P+ A PT QPV + NK ++ EE +ST Sbjct: 1854 PFQSVLVNMPTPKSAGIPVPTPSAKQPVTK--NNKGSGTESDSDESVPELEEQDST 1907 Score = 30.0 bits (66), Expect = 6.6 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Query: 76 PKATGTNREGGKQLPP-AGSSHRVPTTANSSSSG-SKNRSRSHPRAPGGVNSSSAGAPRS 133 P AT + +GG PP G+ + T S G + + + P P S G+P + Sbjct: 1267 PAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGT 1326 Query: 134 TPPARAASP 142 PP A +P Sbjct: 1327 PPPKGAPTP 1335 >gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo sapiens] Length = 1487 Score = 52.0 bits (123), Expect = 2e-06 Identities = 101/404 (25%), Positives = 136/404 (33%), Gaps = 61/404 (15%) Query: 218 LAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAA 277 L A A A S +P NG + RGL PG G +G A A A Sbjct: 295 LDGAKGEAGAPGVKGESGSPGE--------NGSPGPMGPRGL---PGERGRTGPAGAAGA 343 Query: 278 MLAKG----SWPPHPAAPSGGR-------PRGAASP-----PDLASSPRC-PREPPSLAE 320 G + PP P P+GG +G A P P+ A PR P P S Sbjct: 344 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 403 Query: 321 AVYSVYRERSGVAGSRRAAAATAAAAASSCSSP-APCSPPESWGRQSTASSFVDSSLSAF 379 A S G+ G++ +A A A A P P P + G + ++ F Sbjct: 404 AGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGF 463 Query: 380 ALLPLQGGRDRGGDA--EGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGS------ 431 QG + G A +GA G+RG++ P G + RGA G+ Sbjct: 464 K--GEQGPKGEPGPAGPQGAP-GPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQ 520 Query: 432 --MRGARREPEE--PEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPP 487 + G + P E P G + A G GR G A R +G P P Sbjct: 521 DGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGA---RGLTGRPGDAGP------ 571 Query: 488 PSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTST 547 G P +P + P PP G R G P +N E G Sbjct: 572 --QGKVGPSGAP-GEDGRPGPP----GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPG 624 Query: 548 ESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEP-PTAEQPQP 590 L + G+ ++ A P A + G P P+ Q P Sbjct: 625 APGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLP 668 Score = 49.7 bits (117), Expect = 8e-06 Identities = 84/298 (28%), Positives = 97/298 (32%), Gaps = 44/298 (14%) Query: 238 AAAPPGAIPL---NGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGS-WPPHPAAPSG 293 A PPG L G + RG PG G SG+ A A G PP P P G Sbjct: 967 AEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPG 1026 Query: 294 GRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSC-SS 352 G A P SP P A GV G R A A A S Sbjct: 1027 --LTGPAGEPGREGSPGADGPPGRDGAA---------GVKGDRGETGAVGAPGAPGPPGS 1075 Query: 353 PAPCSPPESWGRQSTASSFVDSSLSAFA-LLPLQGGRDRGGDAEGASCSWQRPPGERGSQ 411 P P P G + A + S A +QG + GD A PGERG + Sbjct: 1076 PGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAG-----EPGERGLK 1130 Query: 412 EIPRGELDLSMTNLRGAEGSM-----RGAR--------REPEEPEGAVAARAARGQGGRL 458 RG T L+G G +GA R P P G A G G + Sbjct: 1131 G-HRG-----FTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPI 1184 Query: 459 PRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPG---SADPDSSPLAKAASPSPPLRLE 513 G +G P PP P PP PG SA P K P +R + Sbjct: 1185 GPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRAD 1242 Score = 46.2 bits (108), Expect = 9e-05 Identities = 82/361 (22%), Positives = 110/361 (30%), Gaps = 36/361 (9%) Query: 210 VHSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGS 269 + L KD AA A + AP G G G KPG G Sbjct: 628 LRGLPGKDGETGAAGPPGPAGPAGERGEQGAP-GPSGFQGLPGPPGPPGEGGKPGDQGVP 686 Query: 270 GDAFGAAAML----------------AKGSWPPH--PAAPSGGRPRGA---ASPPDLASS 308 G+A GA ++ A+G P P P P+GA A PP Sbjct: 687 GEA-GAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGP 745 Query: 309 PRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSP-APCSPPESWGRQST 367 P P A + + G G + A + P P P + G + Sbjct: 746 PGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGE 805 Query: 368 ASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRG 427 + + P +RG + PPG G + + G Sbjct: 806 VGPPGPAGSAGARGAP----GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAG 861 Query: 428 AEGSMRGARRE-PEEPEGAVAARAARGQGGRLPRTGRYAALRR---RSTSGLPDYRAPPS 483 A G + P+ P G + ARG G TG A R ++G P PP Sbjct: 862 APGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPG 921 Query: 484 PEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREA 543 P P A DS P +A P L+G + G D PS + P A Sbjct: 922 PSGKDGPKGARGDSGPPGRAGEPG----LQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLA 977 Query: 544 G 544 G Sbjct: 978 G 978 Score = 43.5 bits (101), Expect = 6e-04 Identities = 75/332 (22%), Positives = 103/332 (31%), Gaps = 52/332 (15%) Query: 260 ELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLA 319 E P G G GA + P P P P G PP L + A Sbjct: 130 EQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGN---------FA 180 Query: 320 EAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAF 379 + + E++G G++ P P P G Q + +S Sbjct: 181 AQMAGGFDEKAG--GAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSG- 237 Query: 380 ALLPLQGGR----------DRGGDAEGASCSWQRPPGERGSQEIP-----------RGEL 418 P+ G R D G + + PPG +G++ P RG Sbjct: 238 ---PM-GPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYP 293 Query: 419 DLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDY 478 L ++G P E G+ RG G RTG A R G P Sbjct: 294 GLDGAKGEAGAPGVKGESGSPGE-NGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGP 352 Query: 479 RAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYT 538 PP P P+ G P + A P+ EG+ R + G+ S P Sbjct: 353 AGPPGP-VGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP-------- 403 Query: 539 PLREAGTSTESVLDAVAGQTRDSAVAAPVLGA 570 AG S D + G + SA A + GA Sbjct: 404 ----AGASGNPGTDGIPG-AKGSAGAPGIAGA 430 Score = 33.5 bits (75), Expect = 0.60 Identities = 28/96 (29%), Positives = 35/96 (36%), Gaps = 15/96 (15%) Query: 410 SQEIPRGEL-DLSMTNLRGAEGSM--RGARREPEE------------PEGAVAARAARGQ 454 S EIP GE + T+L A G +G + EP + P+G + RG Sbjct: 77 SPEIPFGECCPICPTDLATASGQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAGEQGPRGD 136 Query: 455 GGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSP 490 G G R G P PP P PP P Sbjct: 137 RGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGP 172 >gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo sapiens] Length = 1418 Score = 52.0 bits (123), Expect = 2e-06 Identities = 101/404 (25%), Positives = 136/404 (33%), Gaps = 61/404 (15%) Query: 218 LAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAA 277 L A A A S +P NG + RGL PG G +G A A A Sbjct: 226 LDGAKGEAGAPGVKGESGSPGE--------NGSPGPMGPRGL---PGERGRTGPAGAAGA 274 Query: 278 MLAKG----SWPPHPAAPSGGR-------PRGAASP-----PDLASSPRC-PREPPSLAE 320 G + PP P P+GG +G A P P+ A PR P P S Sbjct: 275 RGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP 334 Query: 321 AVYSVYRERSGVAGSRRAAAATAAAAASSCSSP-APCSPPESWGRQSTASSFVDSSLSAF 379 A S G+ G++ +A A A A P P P + G + ++ F Sbjct: 335 AGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGF 394 Query: 380 ALLPLQGGRDRGGDA--EGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGS------ 431 QG + G A +GA G+RG++ P G + RGA G+ Sbjct: 395 K--GEQGPKGEPGPAGPQGAP-GPAGEEGKRGARGEPGGVGPIGPPGERGAPGNRGFPGQ 451 Query: 432 --MRGARREPEE--PEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPP 487 + G + P E P G + A G GR G A R +G P P Sbjct: 452 DGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGA---RGLTGRPGDAGP------ 502 Query: 488 PSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTST 547 G P +P + P PP G R G P +N E G Sbjct: 503 --QGKVGPSGAP-GEDGRPGPP----GPQGARGQPGVMGFPGPKGANGEPGKAGEKGLPG 555 Query: 548 ESVLDAVAGQTRDSAVAAPVLGAEQSSPEGASQEP-PTAEQPQP 590 L + G+ ++ A P A + G P P+ Q P Sbjct: 556 APGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLP 599 Score = 49.7 bits (117), Expect = 8e-06 Identities = 84/298 (28%), Positives = 97/298 (32%), Gaps = 44/298 (14%) Query: 238 AAAPPGAIPL---NGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGS-WPPHPAAPSG 293 A PPG L G + RG PG G SG+ A A G PP P P G Sbjct: 898 AEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPG 957 Query: 294 GRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSC-SS 352 G A P SP P A GV G R A A A S Sbjct: 958 --LTGPAGEPGREGSPGADGPPGRDGAA---------GVKGDRGETGAVGAPGAPGPPGS 1006 Query: 353 PAPCSPPESWGRQSTASSFVDSSLSAFA-LLPLQGGRDRGGDAEGASCSWQRPPGERGSQ 411 P P P G + A + S A +QG + GD A PGERG + Sbjct: 1007 PGPAGPTGKQGDRGEAGAQGPMGPSGPAGARGIQGPQGPRGDKGEAG-----EPGERGLK 1061 Query: 412 EIPRGELDLSMTNLRGAEGSM-----RGAR--------REPEEPEGAVAARAARGQGGRL 458 RG T L+G G +GA R P P G A G G + Sbjct: 1062 G-HRG-----FTGLQGLPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPI 1115 Query: 459 PRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPG---SADPDSSPLAKAASPSPPLRLE 513 G +G P PP P PP PG SA P K P +R + Sbjct: 1116 GPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDMSAFAGLGPREKGPDPLQYMRAD 1173 Score = 46.2 bits (108), Expect = 9e-05 Identities = 82/361 (22%), Positives = 110/361 (30%), Gaps = 36/361 (9%) Query: 210 VHSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGS 269 + L KD AA A + AP G G G KPG G Sbjct: 559 LRGLPGKDGETGAAGPPGPAGPAGERGEQGAP-GPSGFQGLPGPPGPPGEGGKPGDQGVP 617 Query: 270 GDAFGAAAML----------------AKGSWPPH--PAAPSGGRPRGA---ASPPDLASS 308 G+A GA ++ A+G P P P P+GA A PP Sbjct: 618 GEA-GAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGASGPAGPPGAQGP 676 Query: 309 PRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSP-APCSPPESWGRQST 367 P P A + + G G + A + P P P + G + Sbjct: 677 PGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGANGEKGE 736 Query: 368 ASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRG 427 + + P +RG + PPG G + + G Sbjct: 737 VGPPGPAGSAGARGAP----GERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDAG 792 Query: 428 AEGSMRGARRE-PEEPEGAVAARAARGQGGRLPRTGRYAALRR---RSTSGLPDYRAPPS 483 A G + P+ P G + ARG G TG A R ++G P PP Sbjct: 793 APGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPG 852 Query: 484 PEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREA 543 P P A DS P +A P L+G + G D PS + P A Sbjct: 853 PSGKDGPKGARGDSGPPGRAGEPG----LQGPAGPPGEKGEPGDDGPSGAEGPPGPQGLA 908 Query: 544 G 544 G Sbjct: 909 G 909 Score = 43.5 bits (101), Expect = 6e-04 Identities = 75/332 (22%), Positives = 103/332 (31%), Gaps = 52/332 (15%) Query: 260 ELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLA 319 E P G G GA + P P P P G PP L + A Sbjct: 61 EQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGN---------FA 111 Query: 320 EAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAF 379 + + E++G G++ P P P G Q + +S Sbjct: 112 AQMAGGFDEKAG--GAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSG- 168 Query: 380 ALLPLQGGR----------DRGGDAEGASCSWQRPPGERGSQEIP-----------RGEL 418 P+ G R D G + + PPG +G++ P RG Sbjct: 169 ---PM-GPRGPPGPPGKPGDDGEAGKPGKAGERGPPGPQGARGFPGTPGLPGVKGHRGYP 224 Query: 419 DLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDY 478 L ++G P E G+ RG G RTG A R G P Sbjct: 225 GLDGAKGEAGAPGVKGESGSPGE-NGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGP 283 Query: 479 RAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYT 538 PP P P+ G P + A P+ EG+ R + G+ S P Sbjct: 284 AGPPGP-VGPAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGP-------- 334 Query: 539 PLREAGTSTESVLDAVAGQTRDSAVAAPVLGA 570 AG S D + G + SA A + GA Sbjct: 335 ----AGASGNPGTDGIPG-AKGSAGAPGIAGA 361 Score = 32.0 bits (71), Expect = 1.7 Identities = 24/88 (27%), Positives = 30/88 (34%), Gaps = 13/88 (14%) Query: 403 RPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTG 462 R PG +G + P D+ G +G P P+G + RG G G Sbjct: 29 RQPGPKGQKGEPGDIKDIV-----GPKG--------PPGPQGPAGEQGPRGDRGDKGEKG 75 Query: 463 RYAALRRRSTSGLPDYRAPPSPEPPPSP 490 R G P PP P PP P Sbjct: 76 APGPRGRDGEPGTPGNPGPPGPPGPPGP 103 >gi|158854042 hypothetical protein LOC222183 [Homo sapiens] Length = 653 Score = 51.6 bits (122), Expect = 2e-06 Identities = 81/312 (25%), Positives = 108/312 (34%), Gaps = 80/312 (25%) Query: 267 GGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVY 326 GGSG GA GGRP A SPPD SSP P + + Sbjct: 315 GGSGQRSGA----------------HGGRPGSAHSPPDKPSSP-----SPRVRD------ 347 Query: 327 RERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVD------------- 373 +AAAA A SP+P S P S GR A+ Sbjct: 348 ----------KAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRRRRRRRRRRSR 397 Query: 374 SSLSAFALLPLQGGRDRGGDAEGASCSWQRPPGERG-SQEIPRGELDLSMTNLRGA---- 428 SS SA P + GR R RP RG S+ + R + RGA Sbjct: 398 SSASA----PRRRGRRR-----------PRPAPPRGSSRSLSRARSSSDSGSGRGAPGPG 442 Query: 429 --EGSMRG----ARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPP 482 GS RG +R E P A A + G R G RS P R+ Sbjct: 443 PEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPG--PHPRSWS 500 Query: 483 SPEPPPSPGSADPDSSPLAKAASPSP--PLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPL 540 S P S + P + + SPSP PL + R +++ ++ Y+P+ Sbjct: 501 SSRSPSKSRSRSAEKRPHSPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPI 560 Query: 541 REAGTSTESVLD 552 R+ + S ++ Sbjct: 561 RKRRRDSPSFME 572 Score = 37.0 bits (84), Expect = 0.054 Identities = 91/377 (24%), Positives = 123/377 (32%), Gaps = 107/377 (28%) Query: 212 SLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSG- 270 S R +D AAAAA A S S P +AP Q RG GG+G Sbjct: 342 SPRVRDKAAAAAPTPPARGKESPS-PRSAPSS-----------QGRG----GRAAGGAGR 385 Query: 271 ----------DAFGAAAMLAKGSWPPHPAAPSG-----GRPRGAASPPDLASSPRCPREP 315 A+A +G P PA P G R R ++ +P EP Sbjct: 386 RRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEP 445 Query: 316 PSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSS 375 S G G + A A + +SP+P Sbjct: 446 GS-----------ERGHGGHGKRAKERPPRARPASTSPSP-------------------- 474 Query: 376 LSAFALLPLQGGRDRGGDAEGASCSWQRPPGER--GSQEIPRGELDLSMTNLRGAEGSMR 433 G R G EG S S P R S P S + R AE Sbjct: 475 ----------GAHGRRGGPEGKSSSRSPGPHPRSWSSSRSP------SKSRSRSAEKRPH 518 Query: 434 GARREP-------EEPEGAVAARAARGQGGRLPRTGR-YAALRRRSTSGLPDYRAP---- 481 R P + +G AR + + R R R Y+ +R+R P + P Sbjct: 519 SPSRSPSPKKPLSRDKDGEGRARHSEAEATRARRRSRSYSPIRKRRRDS-PSFMEPRRIT 577 Query: 482 -----PSPEPPPSPGSA----DPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSS 532 P P PSP S+ D S + + SPSP GS +R S++ PS Sbjct: 578 SARKRPIPYYRPSPSSSSSCLSSDYSTRSHSRSPSPG-HSHGSYSSRSHGTRSRTRSPSR 636 Query: 533 SNKGYTPLREAGTSTES 549 + +P + +S+ES Sbjct: 637 TP---SPSYHSRSSSES 650 Score = 36.6 bits (83), Expect = 0.071 Identities = 29/107 (27%), Positives = 39/107 (36%), Gaps = 20/107 (18%) Query: 430 GSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPS 489 GS R + P G + + GG R+G + R + PP Sbjct: 290 GSQRSSGSRSPSPSGGSGWGSPQRNGGSGQRSGAHGG------------RPGSAHSPPDK 337 Query: 490 PGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKG 536 P S P A AA+P+PP R + SP R PSS +G Sbjct: 338 PSSPSPRVRDKAAAAAPTPPARGKESPSPR--------SAPSSQGRG 376 Score = 34.7 bits (78), Expect = 0.27 Identities = 76/318 (23%), Positives = 103/318 (32%), Gaps = 86/318 (27%) Query: 77 KATGTNREGGKQLP-PAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNS---------- 125 + TG+ R G + P P+G S N GS RS +H PG +S Sbjct: 287 RKTGSQRSSGSRSPSPSGGSGWGSPQRNG---GSGQRSGAHGGRPGSAHSPPDKPSSPSP 343 Query: 126 ---SSAGAPRSTPPAR---AASPSSSSTSVGFFFRIFSGYLHSDKLKVFGPLIMGIGIFL 179 A A TPPAR + SP S+ +S G R G Sbjct: 344 RVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGG--------------------- 382 Query: 180 FICANAVLHENRDKKTKIINLRDLYSTVIDVHSLRAKDLAA---AAAAAAAAAASSSSSA 236 R ++ + R S R + A ++ + + A SSS S Sbjct: 383 ---------AGRRRRRRRRRRRSRSSASAPRRRGRRRPRPAPPRGSSRSLSRARSSSDSG 433 Query: 237 PAAAPPGAIPLNGFLSYVQSRGLELK--------------PGGCGGSGDAFGAAAMLAKG 282 PG P G G K PG G G G ++ + G Sbjct: 434 SGRGAPGPGPEPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPG 493 Query: 283 SWPPHP------AAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSR 336 PHP +PS R R A P S P++P S R++ G +R Sbjct: 494 ---PHPRSWSSSRSPSKSRSRSAEKRPHSPSRSPSPKKPLS---------RDKDGEGRAR 541 Query: 337 RA-AAATAAAAASSCSSP 353 + A AT A S SP Sbjct: 542 HSEAEATRARRRSRSYSP 559 Score = 31.6 bits (70), Expect = 2.3 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 2/75 (2%) Query: 76 PKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRAPGGVNSSSAGAPRSTP 135 P+ G R + PP GSS + +SS SGS + PG R+ Sbjct: 403 PRRRGRRRP--RPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPGSERGHGGHGKRAKE 460 Query: 136 PARAASPSSSSTSVG 150 A P+S+S S G Sbjct: 461 RPPRARPASTSPSPG 475 Score = 30.8 bits (68), Expect = 3.9 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 11/67 (16%) Query: 96 HRVPTTANSSSSGSKNRSRSHPRAP------GGVNSSSAGA-PRSTPPARAASPS----S 144 +R +++SS S +RSH R+P G +S S G R+ P+R SPS S Sbjct: 587 YRPSPSSSSSCLSSDYSTRSHSRSPSPGHSHGSYSSRSHGTRSRTRSPSRTPSPSYHSRS 646 Query: 145 SSTSVGF 151 SS S GF Sbjct: 647 SSESGGF 653 >gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] Length = 564 Score = 51.2 bits (121), Expect = 3e-06 Identities = 81/296 (27%), Positives = 106/296 (35%), Gaps = 62/296 (20%) Query: 288 PAAPSGG----RPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATA 343 P PSG RPR A S P R A++ R+ G A +A A Sbjct: 69 PTRPSGSLTTRRPRDAGEAA--VSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPA 126 Query: 344 AAAASSCSSPAPCS----PPESW---------------------GRQSTASSFVDSSLSA 378 + A SC PAP S P W GR S A + + LS Sbjct: 127 PSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLS- 185 Query: 379 FALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPR------GELDLSMTNLRGAE-GS 431 L PL+ + +G SW G G+ PR G + +RG+E + Sbjct: 186 --LCPLKLRKGSSRRCQGLGSSW----GGSGTPPPPRALWNRHGGAAGARAQVRGSEKRA 239 Query: 432 MRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPG 491 G+ P ARG GG + R++A STSG S EP P Sbjct: 240 CPGSTLPPSSVLAGCVGTRARGHGG--VQRQRFSAPSSHSTSGGRPTGERSSREPLLDPS 297 Query: 492 SADPDSS-PLAKAASPSPP------LRLEGS--PPT------RRDSGSSQSDDPSS 532 A S+ P A+ A SPP RL G PT R D +++ +DP S Sbjct: 298 KAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRS 353 Score = 39.7 bits (91), Expect = 0.008 Identities = 29/72 (40%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Query: 66 GIAMAVVGYWPKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRA--PGGV 123 G + G P +G GG P S+ R P T +S G S S PRA PGG Sbjct: 115 GPGLDCAGSAPAPSGAQSCGG---PAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGG 171 Query: 124 NSSSAGAPRSTP 135 SS AGA R TP Sbjct: 172 RSSRAGARRKTP 183 Score = 35.8 bits (81), Expect = 0.12 Identities = 88/384 (22%), Positives = 118/384 (30%), Gaps = 58/384 (15%) Query: 224 AAAAAAASSSSSAPAAAPPGAI--PLNGF-LSYVQSRGLELKPGGC---GGSGDAFGAAA 277 A +A A S + S AP A+ PL + S RG P GG GA Sbjct: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARR 180 Query: 278 MLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRR 337 P S R +G S + +P PR +++ G AG+R Sbjct: 181 KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPR----------ALWNRHGGAAGARA 230 Query: 338 AAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGA 397 + A + P G ++ V R R Sbjct: 231 QVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQ--------------RQRFSAPSSH 276 Query: 398 SCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGR 457 S S RP GER S+E L + ++ AR P AA+ G G R Sbjct: 277 STSGGRPTGERSSRE------PLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKR 330 Query: 458 LPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSP----------GSADPDSSPLAKAASPS 507 P + A ST+ D R+ + EP GS+ + P A P Sbjct: 331 KPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPG 390 Query: 508 PPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTS---TESVLDAVAGQTRDSAVA 564 P +PP R G S G T L +G T SV R S Sbjct: 391 KPAPRGSAPPARLRGGGGGS--------GLTQLVGSGRGSGVTHSVGTHALATRRGSRAP 442 Query: 565 APVLGAEQSSPEGASQEPPTAEQP 588 PV G + P P + P Sbjct: 443 RPV-GVLRGVPHFRPLSSPAPQSP 465 >gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] Length = 564 Score = 51.2 bits (121), Expect = 3e-06 Identities = 81/296 (27%), Positives = 106/296 (35%), Gaps = 62/296 (20%) Query: 288 PAAPSGG----RPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATA 343 P PSG RPR A S P R A++ R+ G A +A A Sbjct: 69 PTRPSGSLTTRRPRDAGEAA--VSGPSRQRRTSRARTALWGRRSRRAAGPGLDCAGSAPA 126 Query: 344 AAAASSCSSPAPCS----PPESW---------------------GRQSTASSFVDSSLSA 378 + A SC PAP S P W GR S A + + LS Sbjct: 127 PSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARRKTPLS- 185 Query: 379 FALLPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPR------GELDLSMTNLRGAE-GS 431 L PL+ + +G SW G G+ PR G + +RG+E + Sbjct: 186 --LCPLKLRKGSSRRCQGLGSSW----GGSGTPPPPRALWNRHGGAAGARAQVRGSEKRA 239 Query: 432 MRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPG 491 G+ P ARG GG + R++A STSG S EP P Sbjct: 240 CPGSTLPPSSVLAGCVGTRARGHGG--VQRQRFSAPSSHSTSGGRPTGERSSREPLLDPS 297 Query: 492 SADPDSS-PLAKAASPSPP------LRLEGS--PPT------RRDSGSSQSDDPSS 532 A S+ P A+ A SPP RL G PT R D +++ +DP S Sbjct: 298 KAARASALPTARVAHASPPSLAAAQWRLGGGKRKPTVLKGAVRTDLSTAEEEDPRS 353 Score = 39.7 bits (91), Expect = 0.008 Identities = 29/72 (40%), Positives = 33/72 (45%), Gaps = 5/72 (6%) Query: 66 GIAMAVVGYWPKATGTNREGGKQLPPAGSSHRVPTTANSSSSGSKNRSRSHPRA--PGGV 123 G + G P +G GG P S+ R P T +S G S S PRA PGG Sbjct: 115 GPGLDCAGSAPAPSGAQSCGG---PAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGG 171 Query: 124 NSSSAGAPRSTP 135 SS AGA R TP Sbjct: 172 RSSRAGARRKTP 183 Score = 35.8 bits (81), Expect = 0.12 Identities = 88/384 (22%), Positives = 118/384 (30%), Gaps = 58/384 (15%) Query: 224 AAAAAAASSSSSAPAAAPPGAI--PLNGF-LSYVQSRGLELKPGGC---GGSGDAFGAAA 277 A +A A S + S AP A+ PL + S RG P GG GA Sbjct: 121 AGSAPAPSGAQSCGGPAPASALRRPLTQWDASGGGGRGSHSGPRAGTPGGGRSSRAGARR 180 Query: 278 MLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRR 337 P S R +G S + +P PR +++ G AG+R Sbjct: 181 KTPLSLCPLKLRKGSSRRCQGLGSSWGGSGTPPPPR----------ALWNRHGGAAGARA 230 Query: 338 AAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGA 397 + A + P G ++ V R R Sbjct: 231 QVRGSEKRACPGSTLPPSSVLAGCVGTRARGHGGVQ--------------RQRFSAPSSH 276 Query: 398 SCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGR 457 S S RP GER S+E L + ++ AR P AA+ G G R Sbjct: 277 STSGGRPTGERSSRE------PLLDPSKAARASALPTARVAHASPPSLAAAQWRLGGGKR 330 Query: 458 LPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSP----------GSADPDSSPLAKAASPS 507 P + A ST+ D R+ + EP GS+ + P A P Sbjct: 331 KPTVLKGAVRTDLSTAEEEDPRSGRALEPAQGSELWARAERHGGSSGARTLPTPSRARPG 390 Query: 508 PPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTS---TESVLDAVAGQTRDSAVA 564 P +PP R G S G T L +G T SV R S Sbjct: 391 KPAPRGSAPPARLRGGGGGS--------GLTQLVGSGRGSGVTHSVGTHALATRRGSRAP 442 Query: 565 APVLGAEQSSPEGASQEPPTAEQP 588 PV G + P P + P Sbjct: 443 RPV-GVLRGVPHFRPLSSPAPQSP 465 >gi|123701326 zinc finger protein 831 [Homo sapiens] Length = 1677 Score = 50.8 bits (120), Expect = 4e-06 Identities = 91/362 (25%), Positives = 128/362 (35%), Gaps = 50/362 (13%) Query: 207 VIDVHSLRAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGC 266 V D+HS + + +A +S SS A PG +P G + G L+ Sbjct: 827 VEDLHSWKQPEPVSAETPGGPTQPASLSSQKQDADPGEVP-GGSKESARQVGEPLE---- 881 Query: 267 GGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVY 326 SG + AA++ K P A P A P LA+ P+ PR +LA+ +S Sbjct: 882 -SSGASLAAASVALKRVGPRDKATPLHPAAPAPAEHPSLATPPQAPRVLSALADNAFS-- 938 Query: 327 RERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESW------GRQSTASSFVDSSLSAFA 380 A + P P P S G +SFV S L Sbjct: 939 ----------PKYLLRLPQAETPLPLPIPWGPRHSQDSLCSSGWPEERASFVGSGLGT-P 987 Query: 381 LLPLQGGRDRGGDA----EGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAE------- 429 L P G+A E SCS RP R ++ + D T+ A Sbjct: 988 LSPSPASGPSPGEADSILEDPSCS--RPQDGRKGAQLGGDKGDRMATSRPAARELPISAP 1045 Query: 430 GSMRGARREPEEPE-GAVAARAARGQGGRLPRTGRYAALRRRSTSG------LPDYR--A 480 G+ R A P P A + G R+ R + L R SG +P++ Sbjct: 1046 GAPREATSSPPTPTCEAHLVQDMEGDSHRIHRLCMGSTLARARLSGDVLNPWVPNWELGE 1105 Query: 481 PP--SPEPPPSPGSADPD-SSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGY 537 PP +PE P S PD SPL + + R +G PP + S S S+ Sbjct: 1106 PPGNAPEDPSSGPLVGPDPCSPLQPGSFLTALTRPQGVPPGWPELALSSHSGTSRSHSTR 1165 Query: 538 TP 539 +P Sbjct: 1166 SP 1167 >gi|48762934 alpha 2 type I collagen [Homo sapiens] Length = 1366 Score = 50.4 bits (119), Expect = 5e-06 Identities = 81/331 (24%), Positives = 106/331 (32%), Gaps = 49/331 (14%) Query: 223 AAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDA--------FG 274 A A A S S P G I G + + G + + G G +G A G Sbjct: 227 APGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPAGPRGEVG 286 Query: 275 AAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAG 334 + P +P A +GAA P +A +P P G+ G Sbjct: 287 LPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGP---------------RGIPG 331 Query: 335 SRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRD--RGG 392 AA AT A PA S ES + S+ P G + RG Sbjct: 332 PVGAAGATGARGLVGEPGPAG-SKGESGNKGEPGSAGPQGP-------PGPSGEEGKRGP 383 Query: 393 DAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAAR 452 + E S PPG RGS L GA+G R P GA R Sbjct: 384 NGEAGSAGPPGPPGLRGSP---------GSRGLPGADG--RAGVMGPPGSRGASGPAGVR 432 Query: 453 GQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRL 512 G G R G + R G P P E P D P+ A + P + Sbjct: 433 GPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARGEPGNI 492 Query: 513 EGSPPTRRDSGSSQSDDPSSSNKGYTPLREA 543 G P + +G D + +KG+ L A Sbjct: 493 -GFPGPKGPTG----DPGKNGDKGHAGLAGA 518 Score = 43.5 bits (101), Expect = 6e-04 Identities = 66/250 (26%), Positives = 82/250 (32%), Gaps = 33/250 (13%) Query: 241 PPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSG-GRPRGA 299 PPG G + SRG PG G G+ A+ G P+ PSG RGA Sbjct: 593 PPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGTAG-----PSGPSGLPGERGA 647 Query: 300 ASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPA-PCSP 358 A P P + R G G+ A AT + + PA P P Sbjct: 648 AGIPGGKGEKGEPGLRGEIGNPGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGP 707 Query: 359 PESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQR-PPGERGSQEIPRGE 417 S G + G G A A + Q GERG++ P+GE Sbjct: 708 RGSPGERGEV-----------------GPAGPNGFAGPAGAAGQPGAKGERGAKG-PKGE 749 Query: 418 LDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPD 477 + G G + A P P G +RG GG TG A R G Sbjct: 750 -----NGVVGPTGPVGAAG--PAGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSG 802 Query: 478 YRAPPSPEPP 487 PP P P Sbjct: 803 ISGPPGPPGP 812 Score = 42.7 bits (99), Expect = 0.001 Identities = 76/314 (24%), Positives = 95/314 (30%), Gaps = 44/314 (14%) Query: 241 PPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKGSWPPHPAAPSGGRPRGAA 300 PPGA G + G +PG G +G A G A K HP P RG Sbjct: 101 PPGAAGAPGPQGFQGPAGEPGEPGQTGPAG-ARGPAGPPGKAGEDGHPGKPGRPGERGVV 159 Query: 301 SPPDLASSPRCP---------------------------REPPSLAEAVYSVYRERSGVA 333 P P P EP + E G+ Sbjct: 160 GPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLP 219 Query: 334 GSR-RAAAATAAAAASSCSSPAPCSPPESWGRQS----TASSFVDSSLSAFALLPLQGGR 388 G R R A A A S S P P G + + A G Sbjct: 220 GERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGEIGAVGNAGPAGPA 279 Query: 389 DRGGDAEGASCSWQ-RPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVA 447 G+ S PPG G+ + + + + GA G + G R P P GA Sbjct: 280 GPRGEVGLPGLSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPG-LPGPRGIP-GPVGAAG 337 Query: 448 ARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPS 507 A ARG G G + SG P+ PP P + P +A S Sbjct: 338 ATGARGLVGEPGPAG------SKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAG 391 Query: 508 P--PLRLEGSPPTR 519 P P L GSP +R Sbjct: 392 PPGPPGLRGSPGSR 405 Score = 40.8 bits (94), Expect = 0.004 Identities = 74/317 (23%), Positives = 96/317 (30%), Gaps = 40/317 (12%) Query: 224 AAAAAAASSSSSAPAAAPPGAIPLN-GFLSYVQSRGLELKPGGCGGSGDAFGAAAMLAKG 282 A AA + AP P IP G +RGL +PG G G++ + G Sbjct: 308 AKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNKGEPGSAG 367 Query: 283 -SWPPHPAAPSGGR-PRGAAS------PPDLASSPRCPREPPSLAEAVYSVYRERSGVAG 334 PP P+ G R P G A PP L SP P + R+GV G Sbjct: 368 PQGPPGPSGEEGKRGPNGEAGSAGPPGPPGLRGSPGSRGLPGADG---------RAGVMG 418 Query: 335 --SRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGG 392 R A+ A + + P P R S + L G R G Sbjct: 419 PPGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPG 478 Query: 393 DAEGASCSWQRP----PGERGSQEIPRGELDLSMTNLRGAEGSM-----RGARREP---- 439 A + PG +G P D L GA G+ GA+ P Sbjct: 479 PIGPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQG 538 Query: 440 -------EEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGS 492 + P G + G G G+ GLP P PP Sbjct: 539 VQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESG 598 Query: 493 ADPDSSPLAKAASPSPP 509 A + P+ PP Sbjct: 599 AAGPTGPIGSRGPSGPP 615 Score = 40.8 bits (94), Expect = 0.004 Identities = 70/284 (24%), Positives = 87/284 (30%), Gaps = 20/284 (7%) Query: 214 RAKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAF 273 R ++ A A S A A PPG G L GL PG G G Sbjct: 830 RTGEVGAVGPPGFAGEKGPSGEAGTAGPPGTPGPQGLLGAPGILGL---PGSRGERGLPG 886 Query: 274 GAAAMLAKGSWPPHPAAPSGGR-PRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGV 332 A A+ G P A P G R P GA P + +P + + G Sbjct: 887 VAGAVGEPG--PLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGRDGQPGH 944 Query: 333 AGSRRAAAATAAAAASSCSSP-APCSPPESWG-RQSTASSFVDSSLSAFALLPLQGGRDR 390 G R A+ P P P G R T S A G + Sbjct: 945 KGERGYPGNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAGAVGPRGPSGPQGI 1004 Query: 391 GGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSM--RGARRE--PEEPEGAV 446 GD + PGE+G + +P + + L G G +GA P P G Sbjct: 1005 RGD--------KGEPGEKGPRGLPGLKGHNGLQGLPGIAGHHGDQGAPGSVGPAGPRGPA 1056 Query: 447 AARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSP 490 G+ GR G R G PP P PP P Sbjct: 1057 GPSGPAGKDGRTGHPGTVGPAGIRGPQGHQGPAGPPGPPGPPGP 1100 >gi|117938759 GNAS complex locus XLas [Homo sapiens] Length = 1037 Score = 50.4 bits (119), Expect = 5e-06 Identities = 90/355 (25%), Positives = 134/355 (37%), Gaps = 90/355 (25%) Query: 260 ELKPGGCGGSGDAFGAAAMLAKGSWPPHPAA--PSGGRPRGAASPPDLASSP-------- 309 +L PGG G +G G+ P P A P+ RG SPP + P Sbjct: 183 DLAPGGPGAAG---------VPGAPPEEPQALRPAKAGSRGGYSPPPEETMPFELDGEGF 233 Query: 310 RCPREPPSLAEAVYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTAS 369 PP L+ + + V GS + AA A++A +PA +PP Sbjct: 234 GDDSPPPGLSRVI-------AQVDGSSQFAAVAASSAVRL--TPAANAPP---------- 274 Query: 370 SFVDSSLSAFALLPLQGGRDRGGDAEGASCSWQR---PPGERGS-----------QEIPR 415 +V ++ + P Q + G+S W PP E GS + P Sbjct: 275 LWVPGAIGS----PSQEAVRPPSNFTGSS-PWMEISGPPFEIGSAPAGVDDTPVNMDSPP 329 Query: 416 GELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAA-RGQGGRLPRTGRYAALRRRSTSG 474 LD + GA A R P E E A AA +GG++P G Y + Sbjct: 330 IALDGPPIKVSGAPDKRERAERPPVEEEAAEMEGAADAAEGGKVPSPG-YGS-------- 380 Query: 475 LPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSN 534 P+ G+A D++ A A+P+ P G+ P DSG++ +D S + Sbjct: 381 -------------PAAGAASADTAARAAPAAPADPD--SGATPEDPDSGTAPADPDSGA- 424 Query: 535 KGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQSSP----EGASQEPPTA 585 + ++G + + D +G D A A P GA +P GA+ E P A Sbjct: 425 --FAADPDSGAAPAAPADPDSGAAPD-APADPDSGAAPDAPADPDAGAAPEAPAA 476 Score = 36.2 bits (82), Expect = 0.092 Identities = 86/382 (22%), Positives = 124/382 (32%), Gaps = 99/382 (25%) Query: 220 AAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAML 279 AA AA++A + +++AP PGAI S+ P GS + Sbjct: 256 AAVAASSAVRLTPAANAPPLWVPGAIG-------SPSQEAVRPPSNFTGSSPWMEISG-- 306 Query: 280 AKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAA 339 P G P G P SP + P + + RER+ A Sbjct: 307 --------PPFEIGSAPAGVDDTPVNMDSPPIALDGPPIKVSGAPDKRERAERPPVEEEA 358 Query: 340 AAT--AAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAEGA 397 A AA AA P+P +G + ++ D++ A P Sbjct: 359 AEMEGAADAAEGGKVPSP-----GYGSPAAGAASADTAARAAPAAPAD------------ 401 Query: 398 SCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARAARGQGGR 457 P + E P + P +P+ A AA G Sbjct: 402 -------PDSGATPEDP-------------------DSGTAPADPDS--GAFAADPDSGA 433 Query: 458 LPRTGRYAALRRRSTSGLPDYRA-PPSPEPPPSPGSADPDSSPLAKAASPSPPLRLEGSP 516 P AA + PD A P S P +P D ++P A AA + R Sbjct: 434 AP-----AAPADPDSGAAPDAPADPDSGAAPDAPADPDAGAAPEAPAAPAAAETRAAHVA 488 Query: 517 PTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSAVAAPVLGAEQS--- 573 P D+G+ P A ++T A Q R +A AAP GA + Sbjct: 489 PAAPDAGA--------------PTAPAASATR------AAQVRRAASAAPASGARRKIHL 528 Query: 574 ---SPEGASQEPPTAEQPQPVQ 592 SPE + +PPT P+P + Sbjct: 529 RPPSPEIQAADPPT---PRPTR 547 Score = 36.2 bits (82), Expect = 0.092 Identities = 56/221 (25%), Positives = 78/221 (35%), Gaps = 44/221 (19%) Query: 220 AAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFGAAAML 279 AA AA+A AA ++ +APA GA P + G D+ AA Sbjct: 382 AAGAASADTAARAAPAAPADPDSGATPEDP------------DSGTAPADPDSGAFAADP 429 Query: 280 AKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAGSRRAA 339 G+ P PA P G + PD + P P + A+ AG+ A Sbjct: 430 DSGAAPAAPADPDSG------AAPDAPADPDSGAAPDAPADP----------DAGAAPEA 473 Query: 340 AATAAAAASSCSSPAPCSP----PESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGDAE 395 A AAA + + AP +P P + +T ++ V + SA P G R + Sbjct: 474 PAAPAAAETRAAHVAPAAPDAGAPTAPAASATRAAQVRRAASA---APASGARRK----- 525 Query: 396 GASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGAR 436 RPP P + RG S RG R Sbjct: 526 ----IHLRPPSPEIQAADPPTPRPTRASAWRGKSESSRGRR 562 >gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] Length = 1192 Score = 50.1 bits (118), Expect = 6e-06 Identities = 78/322 (24%), Positives = 106/322 (32%), Gaps = 85/322 (26%) Query: 221 AAAAAAAAAASSSSSAPA------AAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFG 274 A + A A+ A S AP A PPG PL+G LS + KPGG S Sbjct: 92 ALSPAPASPARPVSPAPGRRLSLWAVPPGP-PLSGGLSP------DPKPGGAPTSS---- 140 Query: 275 AAAMLAKGSWP-PHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVA 333 +L+ SW P P +GG G++SP S R PP A Sbjct: 141 RRPLLSSPSWGGPEPEGRAGGGIPGSSSPHPGTGSRRLKVAPPPPA-------------- 186 Query: 334 GSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFALLPLQGGRDRGGD 393 P PC + G + GG Sbjct: 187 -------------------PKPCKT-----------------------VTTSGAKAGGGK 204 Query: 394 AEGASCSWQRPPGE---RGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVAARA 450 G+ SW G+ +GS+ +S A G G G A Sbjct: 205 GAGSRLSWPESEGKPRVKGSKSSAGTGASVSAAATAAAAG---GGGSTASTSGGVGAGAG 261 Query: 451 ARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDSSPLAKAASPSPPL 510 ARG+ PR G+ L P +PP PP+P A ++ A+ P+PP+ Sbjct: 262 ARGKLS--PRKGKSKTLDNSDLHPGPPAGSPPPLTLPPTPSPATAVTAASAQPPGPAPPI 319 Query: 511 RLEGSPP---TRRDSGSSQSDD 529 LE P R+ G + + D Sbjct: 320 TLEPPAPGLKRGREGGRASTRD 341 Score = 30.0 bits (66), Expect = 6.6 Identities = 28/111 (25%), Positives = 38/111 (34%), Gaps = 3/111 (2%) Query: 427 GAEGSMRGARREPEEPEGAVAARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPPSPEP 486 GA GS G +P P GA R + + + + T G P+P Sbjct: 43 GARGSETG---DPGSPRGAEEPGKKRHERLFHRQDALWISTSSAGTGGAEPPALSPAPAS 99 Query: 487 PPSPGSADPDSSPLAKAASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGY 537 P P S P A P PPL SP + + S P S+ + Sbjct: 100 PARPVSPAPGRRLSLWAVPPGPPLSGGLSPDPKPGGAPTSSRRPLLSSPSW 150 >gi|45439359 triple functional domain (PTPRF interacting) [Homo sapiens] Length = 3097 Score = 50.1 bits (118), Expect = 6e-06 Identities = 77/309 (24%), Positives = 107/309 (34%), Gaps = 71/309 (22%) Query: 264 GGCGGSGDAFGAAAMLAKGSWPPHPAAPS--GGRPRGAASPPDLASSPRCPREPPSLAEA 321 GG GGSG G+ A H PS GG P + S P P PP L + Sbjct: 2297 GGSGGSGGGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQP-VRHHPPVLVSS 2355 Query: 322 VYSVYRERSGVAGSRRAAAATAAAAASSCSSPAPCSPPESWGRQSTASSFVDSSLSAFAL 381 S E ++G+ S+P P PP ++ S+ Sbjct: 2356 AASSQAEADKMSGT---------------STPGPSLPPPGAAPEAGPSA----------- 2389 Query: 382 LPLQGGRDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEE 441 R G DAEG+ ER ++ IP+ ++ S +G+ + P+ Sbjct: 2390 ---PSRRPPGADAEGS---------EREAEPIPKMKVLES-----PRKGAANASGSSPDA 2432 Query: 442 PEGAVAARAARGQGGRL----PRTGRYAALRRRSTSGLPDYRAPPSPEPPPSPGSADPDS 497 P A+ AR G L PR G + L +S +P P P S Sbjct: 2433 P-----AKDARASLGTLPLGKPRAGAASPLNSPLSSAVPSLGKEPF-----------PPS 2476 Query: 498 SPLAKAAS-----PSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLD 552 SPL K S P+ P GS DS S Q P + G R + S+ S Sbjct: 2477 SPLQKGGSFWSSIPASPASRPGSFTFPGDSDSLQRQTPRHAAPGKDTDRMSTCSSASEQS 2536 Query: 553 AVAGQTRDS 561 + Q+ S Sbjct: 2537 VQSTQSNGS 2545 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.311 0.128 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,893,325 Number of Sequences: 37866 Number of extensions: 1816943 Number of successful extensions: 31077 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 386 Number of HSP's successfully gapped in prelim test: 1655 Number of HSP's that attempted gapping in prelim test: 16821 Number of HSP's gapped (non-prelim): 11476 length of query: 621 length of database: 18,247,518 effective HSP length: 108 effective length of query: 513 effective length of database: 14,157,990 effective search space: 7263048870 effective search space used: 7263048870 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.