TMEM200A 25070

Name: TMEM200A	Sequence: fasta or formatted (491aa)		NCBI GI: 29789291
Description: transmembrane protein 200A		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 23 2 C cysteine 0.8 4 1 D aspartate 4.9 24 2 E glutamate 5.5 27 2 F phenylalanine 3.9 19 2 G glycine 6.3 31 2 H histidine 2.6 13 1 I isoleucine 6.5 32 2 K lysine 6.1 30 2 L leucine 9.6 47 2 M methionine 3.5 17 1 N asparagine 5.3 26 2 P proline 5.1 25 3 Q glutamine 3.5 17 2 R arginine 6.1 30 3 S serine 12.6 62 3 T threonine 5.7 28 2 V valine 5.5 27 4 W tryptophan 0.4 2 1 Y tyrosine 1.4 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transmembrane protein 200A TTMA 0.100 hypothetical protein LOC645369 TMEM200B 0.072 transmembrane protein 200B FAM190B 0.011 granule cell antiserum positive 14 MED1 0.010 mediator complex subunit 1 PAX6 0.009 paired box gene 6 isoform a PAX6 0.009 paired box gene 6 isoform b PAX6 0.009 paired box gene 6 isoform a DUSP6 0.007 dual specificity phosphatase 6 isoform a FANCM 0.007 Fanconi anemia, complementation group M TPR 0.007 nuclear pore complex-associated protein TPR USP11 0.007 ubiquitin specific peptidase 11 TEX15 0.007 testis expressed 15 ANK3 0.007 ankyrin 3 isoform 1 PPFIA1 0.006 PTPRF interacting protein alpha 1 isoform a PPFIA1 0.006 PTPRF interacting protein alpha 1 isoform b TTK 0.006 TTK protein kinase MUC12 0.006 PREDICTED: mucin 12 MUC12 0.006 PREDICTED: mucin 12 LOC400986 0.006 PREDICTED: protein immuno-reactive with anti-PTH po... MYST4 0.006 MYST histone acetyltransferase (monocytic leukemia)... PPFIA3 0.006 PTPRF interacting protein alpha 3 SLCO1B1 0.005 solute carrier organic anion transporter family, me... HEG1 0.005 HEG homolog 1 ESF1 0.005 ABT1-associated protein PDE3B 0.005 phosphodiesterase 3B LOC729213 0.005 PREDICTED: similar to ectonucleotide pyrophosphatas... ATXN7 0.004 ataxin 7 isoform b ATXN7 0.004 ataxin 7 isoform a MUC4 0.004 mucin 4 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.