Guide to the Human Genome
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Name: RABL5 Sequence: fasta or formatted (185aa) NCBI GI: 12232463
Description:

RAB, member RAS oncogene family-like 5 isoform a

Referenced in:

Rab

Other entries for this name:
alt prot [155aa] RAB, member RAS oncogene family-like 5 isoform b
alt prot [108aa] RAB, member RAS oncogene family-like 5 isoform c
alt prot [108aa] RAB, member RAS oncogene family-like 5 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8          7           1
 C cysteine            3.2          6           1
 D aspartate           5.9         11           2
 E glutamate           9.2         17           2
 F phenylalanine       4.3          8           1
 G glycine             5.9         11           2
 H histidine           3.2          6           2
 I isoleucine          5.9         11           2
 K lysine              7.0         13           1
 L leucine             8.6         16           1
 M methionine          4.9          9           1
 N asparagine          4.3          8           2
 P proline             5.4         10           2
 Q glutamine           2.7          5           2
 R arginine            2.7          5           1
 S serine             10.3         19           2
 T threonine           4.3          8           1
 V valine              4.9          9           2
 W tryptophan          1.6          3           1
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB, member RAS oncogene family-like 5 isoform a [Ho... 
RABL5                 0.769   RAB, member RAS oncogene family-like 5 isoform b [H...
RABL5                 0.549   RAB, member RAS oncogene family-like 5 isoform c [H...
RABL5                 0.549   RAB, member RAS oncogene family-like 5 isoform c [H...
RAB7A                 0.053   RAB7, member RAS oncogene family 
ARL8A                 0.047   ADP-ribosylation factor-like 8A 
RAB34                 0.045   Ras-related protein RAB34 isoform 5 
RAB34                 0.045   Ras-related protein RAB34 isoform 3 
RAB34                 0.045   Ras-related protein RAB34 isoform 1 
RAB7L1                0.045   RAB7, member RAS oncogene family-like 1 isoform 1 [...
RAB7L1                0.045   RAB7, member RAS oncogene family-like 1 isoform 1 [Ho...
RAB34                 0.045   Ras-related protein RAB34 isoform 4 
RAB34                 0.045   Ras-related protein RAB34 isoform 2 
ARL8B                 0.045   ADP-ribosylation factor-like 10C 
RAB6A                 0.042   RAB6A, member RAS oncogene family isoform a 
RND2                  0.042   Rho family GTPase 2 
RND3                  0.042   ras homolog gene family, member E 
ARL14                 0.042   ADP-ribosylation factor-like 14 
ARF5                  0.042   ADP-ribosylation factor 5 
RAB6A                 0.039   RAB6A, member RAS oncogene family isoform b 
ARL3                  0.039   ADP-ribosylation factor-like 3 
RAB6B                 0.039   RAB6B, member RAS oncogene family 
RAB41                 0.039   RAB41, member RAS oncogene family 
RND1                  0.039   GTP-binding protein RHO6 
RAB18                 0.039   RAB18, member RAS oncogene family 
RAB12                 0.039   RAB12, member RAS oncogene family 
RAB7B                 0.036   RAB7B, member RAS oncogene family 
RAB1A                 0.036   RAB1A, member RAS oncogene family isoform 1 
RAB1B                 0.036   RAB1B, member RAS oncogene family 
RAB27B                0.036   RAB27B, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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