Guide to the Human Genome
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Name: RAB34 Sequence: fasta or formatted (259aa) NCBI GI: 222144311
Description:

Ras-related protein RAB34 isoform 1

Referenced in:

Rab

Other entries for this name:
alt prot [308aa] Ras-related protein RAB34 isoform 2
alt prot [268aa] Ras-related protein RAB34 isoform 3
alt prot [251aa] Ras-related protein RAB34 isoform 4
alt prot [316aa] Ras-related protein RAB34 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.7         25           2
 C cysteine            3.1          8           2
 D aspartate           5.8         15           2
 E glutamate           6.6         17           1
 F phenylalanine       5.4         14           3
 G glycine             5.0         13           1
 H histidine           1.9          5           1
 I isoleucine          4.6         12           3
 K lysine              7.3         19           3
 L leucine            10.0         26           2
 M methionine          1.5          4           1
 N asparagine          3.9         10           1
 P proline             3.1          8           1
 Q glutamine           3.5          9           1
 R arginine            5.8         15           2
 S serine              5.8         15           2
 T threonine           5.4         14           1
 V valine              8.1         21           2
 W tryptophan          1.2          3           1
 Y tyrosine            2.3          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-related protein RAB34 isoform 1 
RAB34                 1.000   Ras-related protein RAB34 isoform 5 
RAB34                 0.956   Ras-related protein RAB34 isoform 4 
RAB34                 0.956   Ras-related protein RAB34 isoform 2 
RAB34                 0.720   Ras-related protein RAB34 isoform 3 
RAB36                 0.546   RAB36, member RAS oncogene family 
RAB13                 0.210   RAB13, member RAS oncogene family 
RAB35                 0.202   RAB35, member RAS oncogene family 
LOC100131294          0.200   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.200   PREDICTED: similar to hCG24991 
LOC100131294          0.200   PREDICTED: similar to hCG24991 
RAB1B                 0.200   RAB1B, member RAS oncogene family 
RAB6A                 0.194   RAB6A, member RAS oncogene family isoform a 
RAB14                 0.194   GTPase Rab14 
RAB6B                 0.192   RAB6B, member RAS oncogene family 
RAB1A                 0.192   RAB1A, member RAS oncogene family isoform 1 
RAB6A                 0.190   RAB6A, member RAS oncogene family isoform b 
RAB8B                 0.185   RAB8B, member RAS oncogene family 
RAB43                 0.175   RAB43 protein 
RAB4B                 0.175   ras-related GTP-binding protein 4b 
RAB8A                 0.173   mel transforming oncogene 
RAB30                 0.169   RAB30, member RAS oncogene family 
RAB4A                 0.167   RAB4A, member RAS oncogene family 
RAB37                 0.167   RAB37, member RAS oncogene family isoform 2 
RAB10                 0.167   ras-related GTP-binding protein RAB10 
RAB11B                0.163   RAB11B, member RAS oncogene family 
EFCAB4B               0.163   EF-hand calcium binding domain 4B isoform a 
LOC150786             0.163   RAB6C-like 
RAB2A                 0.163   RAB2A, member RAS oncogene family 
RASEF                 0.163   RAS and EF-hand domain containing 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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