Guide to the Human Genome
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Name: RAB27B Sequence: fasta or formatted (218aa) NCBI GI: 5729997
Description:

RAB27B, member RAS oncogene family

Referenced in:

Lysosomes and Related Organelles
Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         14           2
 C cysteine            1.8          4           1
 D aspartate           7.3         16           1
 E glutamate           6.0         13           1
 F phenylalanine       5.5         12           2
 G glycine             7.8         17           2
 H histidine           0.5          1           1
 I isoleucine          4.1          9           1
 K lysine              6.9         15           2
 L leucine             9.2         20           2
 M methionine          2.8          6           1
 N asparagine          6.4         14           1
 P proline             3.7          8           2
 Q glutamine           5.5         12           2
 R arginine            5.0         11           1
 S serine              4.1          9           2
 T threonine           6.9         15           2
 V valine              5.5         12           2
 W tryptophan          0.9          2           1
 Y tyrosine            3.7          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB27B, member RAS oncogene family 
RAB27A                0.705   Ras-related protein Rab-27A 
RAB27A                0.705   Ras-related protein Rab-27A 
RAB27A                0.705   Ras-related protein Rab-27A 
RAB27A                0.705   Ras-related protein Rab-27A 
RAB3A                 0.382   RAB3A, member RAS oncogene family 
RAB3D                 0.373   RAB3D, member RAS oncogene family 
RAB3C                 0.371   RAB3C, member RAS oncogene family 
RAB3B                 0.344   RAB3B, member RAS oncogene family 
RAB8B                 0.337   RAB8B, member RAS oncogene family 
RAB8A                 0.335   mel transforming oncogene 
RAB1B                 0.328   RAB1B, member RAS oncogene family 
RAB13                 0.325   RAB13, member RAS oncogene family 
LOC100131294          0.323   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.323   PREDICTED: similar to hCG24991 
LOC100131294          0.323   PREDICTED: similar to hCG24991 
RAB10                 0.318   ras-related GTP-binding protein RAB10 
RAB35                 0.314   RAB35, member RAS oncogene family 
RAB1A                 0.314   RAB1A, member RAS oncogene family isoform 1 
RAB37                 0.292   RAB37, member RAS oncogene family isoform 2 
RAB11A                0.278   Ras-related protein Rab-11A 
RAB11B                0.278   RAB11B, member RAS oncogene family 
RAB26                 0.278   RAB26, member RAS oncogene family 
RAB25                 0.276   RAB25 
RAB37                 0.271   RAB37, member RAS oncogene family isoform 3 
RAB30                 0.266   RAB30, member RAS oncogene family 
EFCAB4B               0.266   EF-hand calcium binding domain 4B isoform a 
RAB39B                0.264   RAB39B, member RAS oncogene family 
RAB18                 0.254   RAB18, member RAS oncogene family 
RAB14                 0.254   GTPase Rab14 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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