Guide to the Human Genome
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Name: ARL8B Sequence: fasta or formatted (186aa) NCBI GI: 8922601
Description:

ADP-ribosylation factor-like 10C

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          8           2
 C cysteine            2.2          4           2
 D aspartate           5.9         11           1
 E glutamate           6.5         12           2
 F phenylalanine       3.2          6           1
 G glycine             5.4         10           2
 H histidine           1.1          2           1
 I isoleucine          9.1         17           1
 K lysine              7.0         13           1
 L leucine            10.8         20           2
 M methionine          3.8          7           1
 N asparagine          5.4         10           1
 P proline             2.7          5           1
 Q glutamine           4.8          9           1
 R arginine            7.0         13           2
 S serine              7.0         13           1
 T threonine           3.8          7           2
 V valine              5.4         10           1
 W tryptophan          2.7          5           1
 Y tyrosine            2.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor-like 10C 
ARL8A                 0.952   ADP-ribosylation factor-like 8A 
ARF6                  0.290   ADP-ribosylation factor 6 
ARF1                  0.276   ADP-ribosylation factor 1 
ARF1                  0.276   ADP-ribosylation factor 1 
ARF1                  0.276   ADP-ribosylation factor 1 
ARF1                  0.276   ADP-ribosylation factor 1 
ARL1                  0.273   ADP-ribosylation factor-like 1 
ARF3                  0.270   ADP-ribosylation factor 3 
ARF5                  0.261   ADP-ribosylation factor 5 
ARL3                  0.253   ADP-ribosylation factor-like 3 
ARF4                  0.247   ADP-ribosylation factor 4 
ARL2                  0.241   ADP-ribosylation factor-like 2 
ARL13B                0.224   ADP-ribosylation factor-like 2-like 1 isoform 1 [Hom...
ARL11                 0.219   ADP-ribosylation factor-like 11 
ARL4C                 0.210   ADP-ribosylation factor-like 4C 
ARL4A                 0.207   ADP-ribosylation factor-like 4A 
ARL4A                 0.207   ADP-ribosylation factor-like 4A 
ARL4A                 0.207   ADP-ribosylation factor-like 4A 
ARL6                  0.205   ADP-ribosylation factor-like 6 
ARL6                  0.205   ADP-ribosylation factor-like 6 
ARL4D                 0.205   ADP-ribosylation factor-like 4D 
TRIM23                0.202   ADP-ribosylation factor domain protein 1 isoform alph...
ARL14                 0.202   ADP-ribosylation factor-like 14 
TRIM23                0.202   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.202   ADP-ribosylation factor domain protein 1 isoform bet...
SAR1B                 0.193   SAR1a gene homolog 2 
SAR1B                 0.193   SAR1a gene homolog 2 
ARL5A                 0.190   ADP-ribosylation factor-like 5A isoform 1 
ARL10                 0.190   ADP-ribosylation factor-like 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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