Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RAB34 Sequence: fasta or formatted (308aa) NCBI GI: 222144313
Description:

Ras-related protein RAB34 isoform 2

Referenced in:

Rab

Other entries for this name:
alt prot [259aa] Ras-related protein RAB34 isoform 1
alt prot [268aa] Ras-related protein RAB34 isoform 3
alt prot [251aa] Ras-related protein RAB34 isoform 4
alt prot [316aa] Ras-related protein RAB34 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         31           2
 C cysteine            2.9          9           2
 D aspartate           4.5         14           2
 E glutamate           6.2         19           1
 F phenylalanine       5.2         16           3
 G glycine             5.5         17           1
 H histidine           2.3          7           1
 I isoleucine          4.2         13           3
 K lysine              5.8         18           3
 L leucine            11.4         35           2
 M methionine          1.9          6           1
 N asparagine          3.6         11           1
 P proline             5.5         17           2
 Q glutamine           3.2         10           1
 R arginine            6.8         21           2
 S serine              6.2         19           2
 T threonine           4.9         15           1
 V valine              6.5         20           2
 W tryptophan          1.3          4           1
 Y tyrosine            1.9          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-related protein RAB34 isoform 2 
RAB34                 0.988   Ras-related protein RAB34 isoform 5 
RAB34                 0.804   Ras-related protein RAB34 isoform 4 
RAB34                 0.793   Ras-related protein RAB34 isoform 1 
RAB34                 0.756   Ras-related protein RAB34 isoform 3 
RAB36                 0.425   RAB36, member RAS oncogene family 
RAB13                 0.159   RAB13, member RAS oncogene family 
RAB35                 0.154   RAB35, member RAS oncogene family 
LOC100131294          0.149   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.149   PREDICTED: similar to hCG24991 
LOC100131294          0.149   PREDICTED: similar to hCG24991 
RAB14                 0.149   GTPase Rab14 
RAB1B                 0.144   RAB1B, member RAS oncogene family 
RAB1A                 0.142   RAB1A, member RAS oncogene family isoform 1 
RAB6A                 0.139   RAB6A, member RAS oncogene family isoform a 
RAB6B                 0.137   RAB6B, member RAS oncogene family 
RAB6A                 0.137   RAB6A, member RAS oncogene family isoform b 
RAB8B                 0.135   RAB8B, member RAS oncogene family 
RAB10                 0.129   ras-related GTP-binding protein RAB10 
RAB15                 0.129   RAB15, member RAS onocogene family 
RAB43                 0.129   RAB43 protein 
RAB8A                 0.127   mel transforming oncogene 
RAB23                 0.125   Ras-related protein Rab-23 
RAB23                 0.125   Ras-related protein Rab-23 
EFCAB4B               0.125   EF-hand calcium binding domain 4B isoform a 
RAB4B                 0.125   ras-related GTP-binding protein 4b 
RAB37                 0.124   RAB37, member RAS oncogene family isoform 2 
RAB33A                0.120   Ras-related protein Rab-33A 
RAB30                 0.120   RAB30, member RAS oncogene family 
RAB11B                0.119   RAB11B, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press