Guide to the Human Genome
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Name: ARL3 Sequence: fasta or formatted (182aa) NCBI GI: 4757774
Description:

ADP-ribosylation factor-like 3

Referenced in:

ADP-Ribosylation Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         12           2
 C cysteine            1.6          3           1
 D aspartate           5.5         10           1
 E glutamate           7.1         13           3
 F phenylalanine       2.7          5           1
 G glycine             6.6         12           2
 H histidine           1.1          2           1
 I isoleucine          7.7         14           1
 K lysine              8.2         15           3
 L leucine            12.6         23           3
 M methionine          1.1          2           1
 N asparagine          5.5         10           1
 P proline             2.7          5           1
 Q glutamine           6.0         11           1
 R arginine            4.4          8           1
 S serine              6.0         11           1
 T threonine           4.9          9           2
 V valine              5.5         10           1
 W tryptophan          2.2          4           1
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ADP-ribosylation factor-like 3 
ARL2                  0.519   ADP-ribosylation factor-like 2 
ARF3                  0.407   ADP-ribosylation factor 3 
ARF1                  0.401   ADP-ribosylation factor 1 
ARF1                  0.401   ADP-ribosylation factor 1 
ARF1                  0.401   ADP-ribosylation factor 1 
ARF1                  0.401   ADP-ribosylation factor 1 
ARL1                  0.395   ADP-ribosylation factor-like 1 
ARF5                  0.395   ADP-ribosylation factor 5 
ARF6                  0.378   ADP-ribosylation factor 6 
TRIM23                0.378   ADP-ribosylation factor domain protein 1 isoform alph...
ARL5B                 0.378   ADP-ribosylation factor-like 8 
ARF4                  0.372   ADP-ribosylation factor 4 
ARL5A                 0.366   ADP-ribosylation factor-like 5A isoform 1 
ARL11                 0.351   ADP-ribosylation factor-like 11 
TRIM23                0.339   ADP-ribosylation factor domain protein 1 isoform bet...
ARL14                 0.324   ADP-ribosylation factor-like 14 
TRIM23                0.316   ADP-ribosylation factor domain protein 1 isoform gam...
ARL6                  0.304   ADP-ribosylation factor-like 6 
ARL6                  0.304   ADP-ribosylation factor-like 6 
ARL4C                 0.295   ADP-ribosylation factor-like 4C 
ARL5C                 0.292   ADP-ribosylation factor-like 5C 
ARL4D                 0.286   ADP-ribosylation factor-like 4D 
ARL5A                 0.283   ADP-ribosylation factor-like 5A isoform 2 
ARL5A                 0.283   ADP-ribosylation factor-like 5A isoform 2 
ARFRP1                0.277   ADP-ribosylation factor related protein 1 isoform a [...
ARL4A                 0.274   ADP-ribosylation factor-like 4A 
ARL4A                 0.274   ADP-ribosylation factor-like 4A 
ARL4A                 0.274   ADP-ribosylation factor-like 4A 
ARL13B                0.265   ADP-ribosylation factor-like 2-like 1 isoform 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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