Guide to the Human Genome
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Name: RAB34 Sequence: fasta or formatted (268aa) NCBI GI: 222144315
Description:

Ras-related protein RAB34 isoform 3

Referenced in:

Rab

Other entries for this name:
alt prot [259aa] Ras-related protein RAB34 isoform 1
alt prot [308aa] Ras-related protein RAB34 isoform 2
alt prot [251aa] Ras-related protein RAB34 isoform 4
alt prot [316aa] Ras-related protein RAB34 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         25           2
 C cysteine            3.0          8           1
 D aspartate           4.5         12           1
 E glutamate           4.9         13           1
 F phenylalanine       4.5         12           1
 G glycine             5.6         15           1
 H histidine           3.4          9           1
 I isoleucine          4.1         11           3
 K lysine              6.0         16           2
 L leucine            11.9         32           2
 M methionine          2.2          6           1
 N asparagine          2.6          7           1
 P proline             6.7         18           2
 Q glutamine           4.1         11           1
 R arginine            7.5         20           2
 S serine              6.7         18           2
 T threonine           4.5         12           1
 V valine              6.0         16           2
 W tryptophan          1.1          3           1
 Y tyrosine            1.5          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-related protein RAB34 isoform 3 
RAB34                 0.912   Ras-related protein RAB34 isoform 5 
RAB34                 0.869   Ras-related protein RAB34 isoform 2 
RAB34                 0.687   Ras-related protein RAB34 isoform 1 
RAB34                 0.644   Ras-related protein RAB34 isoform 4 
RAB36                 0.408   RAB36, member RAS oncogene family 
RAB13                 0.179   RAB13, member RAS oncogene family 
RAB1B                 0.175   RAB1B, member RAS oncogene family 
RAB1A                 0.175   RAB1A, member RAS oncogene family isoform 1 
LOC100131294          0.171   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.171   PREDICTED: similar to hCG24991 
LOC100131294          0.171   PREDICTED: similar to hCG24991 
RAB8B                 0.163   RAB8B, member RAS oncogene family 
RAB14                 0.160   GTPase Rab14 
RAB35                 0.160   RAB35, member RAS oncogene family 
RAB6A                 0.158   RAB6A, member RAS oncogene family isoform a 
RAB43                 0.158   RAB43 protein 
RAB33A                0.154   Ras-related protein Rab-33A 
RAB8A                 0.154   mel transforming oncogene 
RAB6A                 0.154   RAB6A, member RAS oncogene family isoform b 
RAB6B                 0.154   RAB6B, member RAS oncogene family 
RAB30                 0.152   RAB30, member RAS oncogene family 
RAB10                 0.150   ras-related GTP-binding protein RAB10 
RAB33B                0.150   RAB33B, member RAS oncogene family 
RAB15                 0.148   RAB15, member RAS onocogene family 
RAB11B                0.148   RAB11B, member RAS oncogene family 
RAB11A                0.148   Ras-related protein Rab-11A 
RAB39B                0.144   RAB39B, member RAS oncogene family 
RAB39                 0.144   RAB39, member RAS oncogene family 
RAB12                 0.142   RAB12, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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