Guide to the Human Genome
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Name: RAB34 Sequence: fasta or formatted (316aa) NCBI GI: 222144319
Description:

Ras-related protein RAB34 isoform 5

Referenced in:

Rab

Other entries for this name:
alt prot [259aa] Ras-related protein RAB34 isoform 1
alt prot [308aa] Ras-related protein RAB34 isoform 2
alt prot [268aa] Ras-related protein RAB34 isoform 3
alt prot [251aa] Ras-related protein RAB34 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         31           2
 C cysteine            2.8          9           2
 D aspartate           4.7         15           2
 E glutamate           6.0         19           1
 F phenylalanine       5.1         16           3
 G glycine             5.7         18           1
 H histidine           2.2          7           1
 I isoleucine          4.1         13           3
 K lysine              6.3         20           3
 L leucine            11.4         36           2
 M methionine          1.9          6           1
 N asparagine          3.5         11           1
 P proline             5.4         17           2
 Q glutamine           3.2         10           1
 R arginine            6.6         21           2
 S serine              6.6         21           2
 T threonine           4.7         15           1
 V valine              6.6         21           2
 W tryptophan          1.3          4           1
 Y tyrosine            1.9          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-related protein RAB34 isoform 5 
RAB34                 0.964   Ras-related protein RAB34 isoform 2 
RAB34                 0.809   Ras-related protein RAB34 isoform 1 
RAB34                 0.773   Ras-related protein RAB34 isoform 3 
RAB34                 0.773   Ras-related protein RAB34 isoform 4 
RAB36                 0.442   RAB36, member RAS oncogene family 
RAB13                 0.170   RAB13, member RAS oncogene family 
RAB35                 0.163   RAB35, member RAS oncogene family 
LOC100131294          0.162   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.162   PREDICTED: similar to hCG24991 
LOC100131294          0.162   PREDICTED: similar to hCG24991 
RAB1B                 0.162   RAB1B, member RAS oncogene family 
RAB6A                 0.157   RAB6A, member RAS oncogene family isoform a 
RAB14                 0.157   GTPase Rab14 
RAB6B                 0.155   RAB6B, member RAS oncogene family 
RAB1A                 0.155   RAB1A, member RAS oncogene family isoform 1 
RAB6A                 0.153   RAB6A, member RAS oncogene family isoform b 
RAB8B                 0.150   RAB8B, member RAS oncogene family 
RAB43                 0.142   RAB43 protein 
RAB4B                 0.142   ras-related GTP-binding protein 4b 
RAB8A                 0.140   mel transforming oncogene 
RAB30                 0.137   RAB30, member RAS oncogene family 
RAB4A                 0.135   RAB4A, member RAS oncogene family 
RAB37                 0.135   RAB37, member RAS oncogene family isoform 2 
RAB10                 0.135   ras-related GTP-binding protein RAB10 
RAB11B                0.132   RAB11B, member RAS oncogene family 
EFCAB4B               0.132   EF-hand calcium binding domain 4B isoform a 
LOC150786             0.132   RAB6C-like 
RAB2A                 0.132   RAB2A, member RAS oncogene family 
RASEF                 0.132   RAS and EF-hand domain containing 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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