Guide to the Human Genome
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Name: RND3 Sequence: fasta or formatted (244aa) NCBI GI: 4885069
Description:

ras homolog gene family, member E

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         16           2
 C cysteine            3.7          9           1
 D aspartate           6.6         16           1
 E glutamate           4.9         12           1
 F phenylalanine       2.9          7           1
 G glycine             2.9          7           1
 H histidine           1.6          4           1
 I isoleucine          4.5         11           1
 K lysine              8.6         21           2
 L leucine             7.4         18           2
 M methionine          2.5          6           1
 N asparagine          5.3         13           1
 P proline             4.5         11           1
 Q glutamine           4.1         10           1
 R arginine            5.3         13           2
 S serine             10.2         25           2
 T threonine           6.6         16           1
 V valine              8.2         20           3
 W tryptophan          0.8          2           1
 Y tyrosine            2.9          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras homolog gene family, member E 
RND2                  0.605   Rho family GTPase 2 
RND1                  0.590   GTP-binding protein RHO6 
RHOA                  0.370   ras homolog gene family, member A 
RHOC                  0.368   ras homolog gene family, member C precursor 
RHOC                  0.368   ras homolog gene family, member C precursor 
RHOC                  0.368   ras homolog gene family, member C precursor 
RHOB                  0.357   ras homolog gene family, member B 
RHOD                  0.312   ras homolog D 
RAC1                  0.310   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RHOF                  0.308   ras homolog gene family, member F 
RHOG                  0.301   ras homolog gene family, member G 
RAC3                  0.297   ras-related C3 botulinum toxin substrate 3 (rho famil...
RHOQ                  0.297   ras-like protein TC10 
RAC2                  0.293   ras-related C3 botulinum toxin substrate 2 
RAC1                  0.286   ras-related C3 botulinum toxin substrate 1 isoform Ra...
CDC42                 0.276   cell division cycle 42 isoform 2 
CDC42                 0.271   cell division cycle 42 isoform 1 
CDC42                 0.271   cell division cycle 42 isoform 1 
RHOJ                  0.263   ras homolog gene family, member J 
RHOU                  0.261   ras homolog gene family, member U 
RHOV                  0.224   ras homolog gene family, member V 
RHOH                  0.220   ras homolog gene family, member H 
RHOBTB1               0.132   Rho-related BTB domain containing 1 
RHOBTB2               0.128   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB2               0.126   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.126   Rho-related BTB domain containing 2 isoform 2 [Homo...
RAB19                 0.115   RAB19, member RAS oncogene family 
RAB1A                 0.115   RAB1A, member RAS oncogene family isoform 1 
RAB1B                 0.113   RAB1B, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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