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Search of human proteins with 28559015
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo
sapiens]
(229 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo sap... 479 e-135
gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo sap... 370 e-103
gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo sap... 315 2e-86
gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo ... 313 1e-85
gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo sap... 313 1e-85
gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens] 306 1e-83
gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens] 305 2e-83
gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo sapi... 287 6e-78
gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo sa... 287 6e-78
gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens] 283 1e-76
gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens] 273 7e-74
gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo sap... 251 3e-67
gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo sap... 249 1e-66
gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo sap... 161 5e-40
gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo sa... 161 5e-40
gi|239752309 PREDICTED: hypothetical protein XP_002348195 [Homo ... 102 2e-22
gi|147905620 PR domain containing 9 [Homo sapiens] 74 1e-13
gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens] 69 4e-12
gi|48717241 zinc finger protein 425 [Homo sapiens] 43 2e-04
gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo ... 43 3e-04
gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo ... 43 3e-04
gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo ... 43 3e-04
gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo ... 43 3e-04
gi|22027480 pogo transposable element with KRAB domain [Homo sap... 42 6e-04
gi|118918411 zinc finger protein 777 [Homo sapiens] 40 0.001
gi|21699074 zinc finger protein 688 isoform a [Homo sapiens] 40 0.001
gi|25777704 zinc finger 398 isoform a [Homo sapiens] 39 0.003
gi|170932473 zinc finger protein 786 [Homo sapiens] 38 0.006
gi|41152070 zinc finger protein 75 [Homo sapiens] 38 0.006
gi|20304115 zinc finger protein 551 [Homo sapiens] 38 0.006
>gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo
sapiens]
Length = 229
Score = 479 bits (1232), Expect = e-135
Identities = 229/229 (100%), Positives = 229/229 (100%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR
Sbjct: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF
Sbjct: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL
Sbjct: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE
Sbjct: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
>gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo
sapiens]
Length = 188
Score = 370 bits (951), Expect = e-103
Identities = 188/229 (82%), Positives = 188/229 (82%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAFVRRPRVGSQIPEKMQK
Sbjct: 1 MNGDDAFVRRPRVGSQIPEKMQK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF
Sbjct: 24 ----AFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL
Sbjct: 80 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE
Sbjct: 140 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 188
>gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo
sapiens]
Length = 188
Score = 315 bits (807), Expect = 2e-86
Identities = 159/229 (69%), Positives = 171/229 (74%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDD F RRP VG+QIPEK+QK
Sbjct: 1 MNGDDTFARRPTVGAQIPEKIQK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS++EWEKMK SEKI+YVYMKRKYEAMTKLGFKA LP FMRNKRV DF
Sbjct: 24 ----AFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTKLGFKAILPSFMRNKRVTDF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
QGNDFDNDPNRGNQV+ PQMTFGRLQGIFPKI P+KPAEEGN SK VPEASGPQN+GKQL
Sbjct: 80 QGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVPEASGPQNDGKQL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
P GK TSEK+N SGPKRG+HAWTHR+RERKQLVIYEEISDP+EDDE
Sbjct: 140 CPPGKPTTSEKINMISGPKRGEHAWTHRLRERKQLVIYEEISDPEEDDE 188
>gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo
sapiens]
Length = 188
Score = 313 bits (801), Expect = 1e-85
Identities = 158/229 (68%), Positives = 172/229 (75%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAF RRP VG+QIPEK+QK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS++EWEKMKASEKI YVYMKRKYEAMTKLGFKATLPPFM NKR DF
Sbjct: 24 ----AFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTKLGFKATLPPFMCNKRAEDF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
QGND DNDPNRGNQVE PQMTFGRLQGI PKI P+KPAEEGNDS+ VPEASGPQN+GK+L
Sbjct: 80 QGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQNDGKEL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
P GK TSEK+++ SGPKRG+HAWTHR+RERKQLVIYEEISDP+EDDE
Sbjct: 140 CPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEISDPEEDDE 188
>gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo
sapiens]
Length = 188
Score = 313 bits (801), Expect = 1e-85
Identities = 158/229 (68%), Positives = 172/229 (75%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAF RRP VG+QIPEK+QK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS++EWEKMKASEKI YVYMKRKYEAMTKLGFKATLPPFM NKR DF
Sbjct: 24 ----AFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTKLGFKATLPPFMCNKRAEDF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
QGND DNDPNRGNQVE PQMTFGRLQGI PKI P+KPAEEGNDS+ VPEASGPQN+GK+L
Sbjct: 80 QGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQNDGKEL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
P GK TSEK+++ SGPKRG+HAWTHR+RERKQLVIYEEISDP+EDDE
Sbjct: 140 CPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEISDPEEDDE 188
>gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens]
Length = 188
Score = 306 bits (784), Expect = 1e-83
Identities = 156/229 (68%), Positives = 168/229 (73%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAF RRPR G+QIPEK+QK
Sbjct: 1 MNGDDAFARRPRAGAQIPEKIQK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
+FDDIAKYFS+KEWEKMK+ EKI YVYMKRKYEAMTKLGFKATLPPFM N D
Sbjct: 24 ----SFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTKLGFKATLPPFMHNTGATDL 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
QGNDFDND N+GNQVE PQMTF RLQ IFPKI P+KPAEEGNDSKGVPEASG QN+GK L
Sbjct: 80 QGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEGNDSKGVPEASGSQNDGKHL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
P GK +TSEK+NKTSGPKRGKHAWTHR+RERKQLVIYEEISDP+EDDE
Sbjct: 140 CPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEISDPEEDDE 188
>gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens]
Length = 188
Score = 305 bits (781), Expect = 2e-83
Identities = 158/229 (68%), Positives = 166/229 (72%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAF RRPR GSQIPEK+QK
Sbjct: 1 MNGDDAFARRPRAGSQIPEKIQK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS+KEWEKMK+SEKIIYVYMKRKYEAMTKLGFKATLPPFM N D
Sbjct: 24 ----AFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTKLGFKATLPPFMCNTGATDL 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
QGNDFDND N NQVE QMTFGRLQGIFPKI P+KPAE GNDSK VPEASG QN+GKQL
Sbjct: 80 QGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVGNDSKEVPEASGLQNDGKQL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
P GK TSEK+NK SGPKRGKHAWTHR+RERKQLVIYEEISDP+EDDE
Sbjct: 140 CPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEISDPEEDDE 188
>gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo
sapiens]
Length = 188
Score = 287 bits (734), Expect = 6e-78
Identities = 147/229 (64%), Positives = 161/229 (70%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAF RRPR +QI EK++K
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS+KEWEKMK+SEKI+YVYMK YE MTKLGFK TLPPFMR+KR ADF
Sbjct: 24 ----AFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTKLGFKVTLPPFMRSKRAADF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
GNDF ND N NQVE PQMTFG LQ IFPKI P+KPAEE N K VPEASGPQN+GKQL
Sbjct: 80 HGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEENGLKEVPEASGPQNDGKQL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
P G +T EK+NKTSGPKRGKHAWTHR+RERKQLV+YEEISDP+EDDE
Sbjct: 140 CPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEISDPEEDDE 188
>gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo
sapiens]
Length = 188
Score = 287 bits (734), Expect = 6e-78
Identities = 147/229 (64%), Positives = 161/229 (70%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAF RRPR +QI EK++K
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS+KEWEKMK+SEKI+YVYMK YE MTKLGFK TLPPFMR+KR ADF
Sbjct: 24 ----AFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTKLGFKVTLPPFMRSKRAADF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
GNDF ND N NQVE PQMTFG LQ IFPKI P+KPAEE N K VPEASGPQN+GKQL
Sbjct: 80 HGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEENGLKEVPEASGPQNDGKQL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
P G +T EK+NKTSGPKRGKHAWTHR+RERKQLV+YEEISDP+EDDE
Sbjct: 140 CPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEISDPEEDDE 188
>gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens]
Length = 188
Score = 283 bits (723), Expect = 1e-76
Identities = 145/229 (63%), Positives = 158/229 (68%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDD F +RPR ++ EK K
Sbjct: 1 MNGDDTFAKRPRDDAKASEKRSK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIA YFS+KEW+KMK SEKI YVYMKR Y+AMTKLGFK TLPPFM NK+ DF
Sbjct: 24 ----AFDDIATYFSKKEWKKMKYSEKISYVYMKRNYKAMTKLGFKVTLPPFMCNKQATDF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
QGNDFDND NR QVEHPQMTFGRL I PKI P+KPAE+ NDSKGV EASGPQN+GKQL
Sbjct: 80 QGNDFDNDHNRRIQVEHPQMTFGRLHRIIPKIMPKKPAEDENDSKGVSEASGPQNDGKQL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
P GK N SEK+NK SGPKRGKHAWTHR+RERKQLVIYEEISDP+EDDE
Sbjct: 140 HPPGKANISEKINKRSGPKRGKHAWTHRLRERKQLVIYEEISDPEEDDE 188
>gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens]
Length = 188
Score = 273 bits (699), Expect = 7e-74
Identities = 142/229 (62%), Positives = 160/229 (69%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAF +RPR ++ EK K
Sbjct: 1 MNGDDAFAKRPRDDAKASEKRSK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS++EWEKMK SEKI V+MKRKYEAMTKLGF TL FMRNKR D
Sbjct: 24 ----AFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTKLGFNVTLSLFMRNKRATDS 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
Q ND DND NRGN+VE PQMTFGRLQ I PKI PEKPAEEG+DSKGVPEASGPQN+GK+L
Sbjct: 80 QRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEGSDSKGVPEASGPQNDGKKL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
P GK ++SEK+++ SGPKRGKHAWTHR+RERKQLVIYEEISDP+EDD+
Sbjct: 140 CPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEISDPEEDDK 188
>gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo
sapiens]
Length = 170
Score = 251 bits (642), Expect = 3e-67
Identities = 130/197 (65%), Positives = 139/197 (70%), Gaps = 41/197 (20%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDD F RRP VG+QIPEK+QK
Sbjct: 1 MNGDDTFARRPTVGAQIPEKIQK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS++EWEKMK SEKI+YVYMKRKYEAMTKLGFKA LP FMRNKRV DF
Sbjct: 24 ----AFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTKLGFKAILPSFMRNKRVTDF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
QGNDFDNDPNRGNQV+ PQMTFGRLQGIFPKI P+KPAEEGN SK VPEASGPQN+GKQL
Sbjct: 80 QGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEGNVSKEVPEASGPQNDGKQL 139
Query: 181 RPSGKLNTSEKVNKTSG 197
P GK TSEK+N SG
Sbjct: 140 CPPGKPTTSEKINMISG 156
>gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo
sapiens]
Length = 223
Score = 249 bits (637), Expect = 1e-66
Identities = 129/202 (63%), Positives = 142/202 (70%), Gaps = 41/202 (20%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAF RRP VG+QIPEK+QK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS++EWEKMKASEKI YVYMKRKYEAMTKLGFKATLPPFM NKR DF
Sbjct: 24 ----AFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTKLGFKATLPPFMCNKRAEDF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
QGND DNDPNRGNQVE PQMTFGRLQGI PKI P+KPAEEGNDS+ VPEASGPQN+GK+L
Sbjct: 80 QGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEGNDSEEVPEASGPQNDGKEL 139
Query: 181 RPSGKLNTSEKVNKTSGPKRGK 202
P GK TSEK+++ SG + +
Sbjct: 140 CPPGKPTTSEKIHERSGNREAQ 161
>gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo
sapiens]
Length = 153
Score = 161 bits (407), Expect = 5e-40
Identities = 86/151 (56%), Positives = 93/151 (61%), Gaps = 41/151 (27%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAF RRPR +QI EK++K
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS+KEWEKMK+SEKI+YVYMK YE MTKLGFK TLPPFMR+KR ADF
Sbjct: 24 ----AFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTKLGFKVTLPPFMRSKRAADF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPK 151
GNDF ND N NQVE PQMTFG LQ IFPK
Sbjct: 80 HGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
>gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo
sapiens]
Length = 153
Score = 161 bits (407), Expect = 5e-40
Identities = 86/151 (56%), Positives = 93/151 (61%), Gaps = 41/151 (27%)
Query: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
MNGDDAF RRPR +QI EK++K
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRK------------------------------------- 23
Query: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
AFDDIAKYFS+KEWEKMK+SEKI+YVYMK YE MTKLGFK TLPPFMR+KR ADF
Sbjct: 24 ----AFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTKLGFKVTLPPFMRSKRAADF 79
Query: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPK 151
GNDF ND N NQVE PQMTFG LQ IFPK
Sbjct: 80 HGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
>gi|239752309 PREDICTED: hypothetical protein XP_002348195 [Homo
sapiens]
Length = 102
Score = 102 bits (255), Expect = 2e-22
Identities = 48/66 (72%), Positives = 54/66 (81%)
Query: 135 VEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNK 194
VEHPQMTFGRL I PKI P+KPAE+ NDSKGV EASGPQN+GKQL P GK N SEK+NK
Sbjct: 37 VEHPQMTFGRLHRIIPKIMPKKPAEDENDSKGVSEASGPQNDGKQLHPPGKANISEKINK 96
Query: 195 TSGPKR 200
SG ++
Sbjct: 97 RSGKRK 102
>gi|147905620 PR domain containing 9 [Homo sapiens]
Length = 894
Score = 73.6 bits (179), Expect = 1e-13
Identities = 58/178 (32%), Positives = 91/178 (51%), Gaps = 17/178 (9%)
Query: 65 AFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKR------VA 118
AF DI+ YF+++EW +M EK Y +KR Y A+ +G +AT P FM ++R V
Sbjct: 27 AFKDISIYFTKEEWAEMGDWEKTRYRNVKRNYNALITIGLRATRPAFMCHRRQAIKLQVD 86
Query: 119 DFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITP------EKPAEEGNDSKGVPEASG 172
D + +D + P + QV+ P M Q K P E +E + + + ASG
Sbjct: 87 DTEDSDEEWTPRQ--QVKPPWMALRVEQRKHQKGMPKASFSNESSLKELSRTANLLNASG 144
Query: 173 PQNNGKQLRPSGKLNTSEKVNKTSGPKRGKHA--WTHRVRERKQLVIYEEISDPQEDD 228
+ K + PSG+ +TS + ++ R K + +RERK Y+E+S+PQ+DD
Sbjct: 145 SEQAQKPVSPSGEASTSGQHSRLKLELRKKETERKMYSLRERKGHA-YKEVSEPQDDD 201
>gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens]
Length = 492
Score = 68.6 bits (166), Expect = 4e-12
Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 65 AFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKR------VA 118
AF DI+ YF+++EW +M EK Y +K Y A+ +G +AT P FM ++R V
Sbjct: 27 AFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNALITVGLRATRPAFMCHRRQAIKLQVD 86
Query: 119 DFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITP------EKPAEEGNDSKGVPEASG 172
D + +D + P + QV+ P M F Q K P E E + + + S
Sbjct: 87 DTEDSDEEWTPRQ--QVKPPWMAFRGEQSKHQKGMPKASFNNESSLRELSGTPNLLNTSD 144
Query: 173 PQNNGKQLRPSGKLNTSEKVNKTSGPKRGK--HAWTHRVRERKQLVIYEEISDPQEDD 228
+ K + P G+ +TS + ++ R K + +RERK Y+EIS+PQ+DD
Sbjct: 145 SEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGKMYSLRERKGHA-YKEISEPQDDD 201
>gi|48717241 zinc finger protein 425 [Homo sapiens]
Length = 752
Score = 43.1 bits (100), Expect = 2e-04
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 34/156 (21%)
Query: 66 FDDIAKYFSEKEWEKMKASEKIIYVY-MKRKYEAMTKLGFKATLPPFMRNKRVADFQGND 124
FDD+A YFSE+EWE ++ +K +Y MK YE + LG+ + P +
Sbjct: 11 FDDVALYFSEQEWEILEKWQKQMYKQEMKTNYETLDSLGYAFSKPDLI------------ 58
Query: 125 FDNDPNRGNQVEHPQMTFGRLQGIFPKI--TPEKPAEEGNDSKGVPEASGPQNNGKQL-- 180
+E +M QG K T P +E + K N GK L
Sbjct: 59 --------TWMEQGRMLLISEQGCLDKTRRTTSPPTDEQLNMK---------NTGKLLCF 101
Query: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLV 216
G T E+ + +GP++ R +ERK L+
Sbjct: 102 DDEGTPRTKEEDCRLNGPQKQDLCAALRGKERKILL 137
>gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 42.7 bits (99), Expect = 3e-04
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 42 FWKVGREPASSIKALLCGRGEAR----AFDDIAKYFSEKEWEKMKASEKIIYVY-MKRKY 96
FW + P S +GEA FDD+A YFSE EW K++ +K +Y + M+ Y
Sbjct: 125 FWILRLPPGS--------KGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNY 176
Query: 97 EAMTKLGFKATLPPFMRNKRVADFQGNDFDN-DPNRGNQVE--HPQMTFGRLQGIFPKIT 153
E + L + + P + R+ + D +GN+VE P+M L +T
Sbjct: 177 ETLVSLDYAISKPDIL--TRIERGEEPCLDRWGQEKGNEVEVGRPRMMGTGLPPYPEHLT 234
Query: 154 -PEKPAEEGNDSKGVPEASGPQNNGKQLRPSG 184
P PA+E P+ Q++ ++ P+G
Sbjct: 235 SPLSPAQEELKEGQAPKQQ--QDSEARVAPAG 264
>gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo
sapiens]
Length = 546
Score = 42.7 bits (99), Expect = 3e-04
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 42 FWKVGREPASSIKALLCGRGEAR----AFDDIAKYFSEKEWEKMKASEKIIYVY-MKRKY 96
FW + P S +GEA FDD+A YFSE EW K++ +K +Y + M+ Y
Sbjct: 125 FWILRLPPGS--------KGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNY 176
Query: 97 EAMTKLGFKATLPPFMRNKRVADFQGNDFDN-DPNRGNQVE--HPQMTFGRLQGIFPKIT 153
E + L + + P + R+ + D +GN+VE P+M L +T
Sbjct: 177 ETLVSLDYAISKPDIL--TRIERGEEPCLDRWGQEKGNEVEVGRPRMMGTGLPPYPEHLT 234
Query: 154 -PEKPAEEGNDSKGVPEASGPQNNGKQLRPSG 184
P PA+E P+ Q++ ++ P+G
Sbjct: 235 SPLSPAQEELKEGQAPKQQ--QDSEARVAPAG 264
>gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo
sapiens]
Length = 546
Score = 42.7 bits (99), Expect = 3e-04
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 42 FWKVGREPASSIKALLCGRGEAR----AFDDIAKYFSEKEWEKMKASEKIIYVY-MKRKY 96
FW + P S +GEA FDD+A YFSE EW K++ +K +Y + M+ Y
Sbjct: 125 FWILRLPPGS--------KGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNY 176
Query: 97 EAMTKLGFKATLPPFMRNKRVADFQGNDFDN-DPNRGNQVE--HPQMTFGRLQGIFPKIT 153
E + L + + P + R+ + D +GN+VE P+M L +T
Sbjct: 177 ETLVSLDYAISKPDIL--TRIERGEEPCLDRWGQEKGNEVEVGRPRMMGTGLPPYPEHLT 234
Query: 154 -PEKPAEEGNDSKGVPEASGPQNNGKQLRPSG 184
P PA+E P+ Q++ ++ P+G
Sbjct: 235 SPLSPAQEELKEGQAPKQQ--QDSEARVAPAG 264
>gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 42.7 bits (99), Expect = 3e-04
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 21/152 (13%)
Query: 42 FWKVGREPASSIKALLCGRGEAR----AFDDIAKYFSEKEWEKMKASEKIIYVY-MKRKY 96
FW + P S +GEA FDD+A YFSE EW K++ +K +Y + M+ Y
Sbjct: 125 FWILRLPPGS--------KGEAPKVPVTFDDVAVYFSELEWGKLEDWQKELYKHVMRGNY 176
Query: 97 EAMTKLGFKATLPPFMRNKRVADFQGNDFDN-DPNRGNQVE--HPQMTFGRLQGIFPKIT 153
E + L + + P + R+ + D +GN+VE P+M L +T
Sbjct: 177 ETLVSLDYAISKPDIL--TRIERGEEPCLDRWGQEKGNEVEVGRPRMMGTGLPPYPEHLT 234
Query: 154 -PEKPAEEGNDSKGVPEASGPQNNGKQLRPSG 184
P PA+E P+ Q++ ++ P+G
Sbjct: 235 SPLSPAQEELKEGQAPKQQ--QDSEARVAPAG 264
>gi|22027480 pogo transposable element with KRAB domain [Homo
sapiens]
Length = 609
Score = 41.6 bits (96), Expect = 6e-04
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 49 PASSIKALLCGRGE--ARAFDDIAKYFSEKEWEKMKASEKIIY-VYMKRKYEAMTKLGFK 105
PA K +C G FD++A YFS++EWE + +K +Y M+ YE + L F
Sbjct: 30 PADMQKVRICSEGGWVPALFDEVAIYFSDEEWEVLTEQQKALYREVMRMNYETVLSLEF- 88
Query: 106 ATLPPFMRNKRVADFQGND 124
PF + + +G +
Sbjct: 89 ----PFPKPDMITRLEGEE 103
>gi|118918411 zinc finger protein 777 [Homo sapiens]
Length = 831
Score = 40.4 bits (93), Expect = 0.001
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Query: 66 FDDIAKYFSEKEWEKMKASEKIIYV-YMKRKYEAMTKLGFKATLPPFMRNKRVADFQGND 124
FDD+A +FSE+EW + +K +Y M+ YE++ + + + P M +
Sbjct: 287 FDDVAVHFSEQEWGNLSEWQKELYKNVMRGNYESLVSMDYAISKPDLMSQMERGERPTMQ 346
Query: 125 FDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPE 169
D G P GI KI + +EG++S PE
Sbjct: 347 EQEDSEEGETPTDPSAAH---DGIVIKIEVQ-TNDEGSESLETPE 387
>gi|21699074 zinc finger protein 688 isoform a [Homo sapiens]
Length = 276
Score = 40.4 bits (93), Expect = 0.001
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 14/118 (11%)
Query: 58 CGRGEARAFDDIAKYFSEKEWEKMKASEKIIY-VYMKRKYEAMTKLGFKATLPPFMRNKR 116
C + +F D+A YFS +EW ++ +++ +Y M+ Y + LGF P +
Sbjct: 20 CRKPGTVSFADVAVYFSPEEWGCLRPAQRALYRDVMQETYGHLGALGFPGPKPALISWME 79
Query: 117 VADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQ 174
+ DP +G ++ G +G P E+P E VP A GP+
Sbjct: 80 QESEAWSPAAQDPEKGERLG------GARRGDVPNRKEEEPEE-------VPRAKGPR 124
>gi|25777704 zinc finger 398 isoform a [Homo sapiens]
Length = 642
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 65 AFDDIAKYFSEKEWEKMKASEKIIYV-YMKRKYEAMTKLGFKATLP 109
AFDD++ YFS EWEK++ +K +Y MK YE++ + + P
Sbjct: 144 AFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAINQP 189
>gi|170932473 zinc finger protein 786 [Homo sapiens]
Length = 782
Score = 38.1 bits (87), Expect = 0.006
Identities = 16/38 (42%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 66 FDDIAKYFSEKEWEKMKASEKIIYVY-MKRKYEAMTKL 102
F+D+A YFSE+EW+ ++A +K +Y + M+ YE + L
Sbjct: 11 FEDVAIYFSEQEWQDLEAWQKELYKHVMRSNYETLVSL 48
>gi|41152070 zinc finger protein 75 [Homo sapiens]
Length = 510
Score = 38.1 bits (87), Expect = 0.006
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 66 FDDIAKYFSEKEWEKMKASEKIIY-VYMKRKYEAMTKLGFK 105
F+D+A YFSE+EW+ + EK +Y M+ YE + LG K
Sbjct: 237 FEDVAVYFSEEEWQLLNPLEKTLYNDVMQDIYETVISLGLK 277
>gi|20304115 zinc finger protein 551 [Homo sapiens]
Length = 654
Score = 38.1 bits (87), Expect = 0.006
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 62 EARAFDDIAKYFSEKEWEKMKASEKIIYV-YMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
+ F+D+A YFS++EWE + S++ +Y M + +T LG+ M N+ +A
Sbjct: 11 QGMTFEDVAIYFSQEEWELLDESQRFLYCDVMLENFAHVTSLGYCHG----MENEAIASE 66
Query: 121 QGNDFDNDPNRGN 133
Q ++GN
Sbjct: 67 QSVSIQVRTSKGN 79
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,023,948
Number of Sequences: 37866
Number of extensions: 471176
Number of successful extensions: 1547
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 102
Number of HSP's that attempted gapping in prelim test: 1386
Number of HSP's gapped (non-prelim): 259
length of query: 229
length of database: 18,247,518
effective HSP length: 99
effective length of query: 130
effective length of database: 14,498,784
effective search space: 1884841920
effective search space used: 1884841920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.