Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZNF551 Sequence: fasta or formatted (654aa) NCBI GI: 20304115
Description:

zinc finger protein 551

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.2         21           2
 C cysteine            6.1         40           2
 D aspartate           2.0         13           1
 E glutamate           9.9         65           3
 F phenylalanine       5.0         33           2
 G glycine             6.3         41           2
 H histidine           7.5         49           2
 I isoleucine          4.3         28           2
 K lysine              6.1         40           2
 L leucine             4.9         32           2
 M methionine          1.2          8           1
 N asparagine          1.7         11           1
 P proline             3.5         23           1
 Q glutamine           6.4         42           2
 R arginine            8.1         53           2
 S serine             11.0         72           4
 T threonine           5.2         34           2
 V valine              3.5         23           1
 W tryptophan          0.5          3           1
 Y tyrosine            3.5         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 551 
ZNF418                0.491   zinc finger protein 418 
ZNF132                0.481   zinc finger protein 132 
ZNF304                0.476   zinc finger protein 304 
ZNF17                 0.475   zinc finger protein 17 
ZNF256                0.474   zinc finger protein 256 
ZNF814                0.472   zinc finger protein 814 
ZNF530                0.471   zinc finger protein 530 
ZNF420                0.438   zinc finger protein 420 
ZNF549                0.435   zinc finger protein 549 
ZNF470                0.428   zinc finger protein 470 
ZNF135                0.428   zinc finger protein 135 
ZNF416                0.425   zinc finger protein 416 
ZNF569                0.418   zinc finger protein 569 
LOC100287429          0.413   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.413   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.413   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.413   zinc finger protein 84 
ZNF84                 0.413   zinc finger protein 84 
ZNF184                0.413   zinc finger protein 184 
ZNF585B               0.411   zinc finger protein 585B 
ZNF211                0.411   zinc finger protein 211 isoform 2 
ZNF546                0.409   zinc finger protein 546 
ZNF211                0.405   zinc finger protein 211 isoform 1 
ZNF471                0.405   zinc finger protein 471 
ZNF749                0.404   zinc finger protein 749 
ZNF484                0.404   zinc finger protein 484 isoform b 
ZNF484                0.404   zinc finger protein 484 isoform a 
ZNF605                0.404   zinc finger protein 605 
ZNF30                 0.403   zinc finger protein 30 isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press