Guide to the Human Genome
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Name: ZNF688 Sequence: fasta or formatted (276aa) NCBI GI: 21699074
Description:

zinc finger protein 688 isoform a

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [262aa] zinc finger protein 688 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         29           2
 C cysteine            2.9          8           1
 D aspartate           4.0         11           1
 E glutamate           8.0         22           3
 F phenylalanine       3.3          9           1
 G glycine             8.7         24           2
 H histidine           2.5          7           1
 I isoleucine          2.2          6           1
 K lysine              3.6         10           1
 L leucine             4.3         12           2
 M methionine          2.2          6           1
 N asparagine          1.1          3           1
 P proline            14.9         41           3
 Q glutamine           3.3          9           1
 R arginine           12.0         33           2
 S serine              4.7         13           1
 T threonine           2.5          7           2
 V valine              5.8         16           1
 W tryptophan          1.8          5           1
 Y tyrosine            1.8          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 688 isoform a 
ZNF688                0.757   zinc finger protein 688 isoform b 
ZNF785                0.344   zinc finger protein 785 
ZNF689                0.321   zinc finger protein HIT-39 
ZNF764                0.307   zinc finger protein 764 
ZNF19                 0.171   zinc finger protein 19 
ZNF707                0.164   zinc finger protein 707 
ZNF707                0.164   zinc finger protein 707 
ZNF707                0.164   zinc finger protein 707 
ZFP92                 0.152   zinc finger protein 92 homolog 
ZNF135                0.148   zinc finger protein 135 
ZNF74                 0.145   zinc finger protein 74 
ZNF780A               0.141   zinc finger protein 780A isoform b 
ZNF780A               0.141   zinc finger protein 780A isoform b 
ZNF8                  0.141   zinc finger protein 8 
ZNF780B               0.139   zinc finger protein 780B 
ZNF747                0.139   zinc finger protein 747 
ZNF773                0.136   zinc finger protein 773 
ZNF311                0.132   zinc finger protein 311 
ZNF251                0.132   zinc finger protein 251 
ZNF419                0.132   zinc finger protein 419 isoform 1 
ZNF419                0.131   zinc finger protein 419 isoform 4 
ZNF419                0.131   zinc finger protein 419 isoform 3 
ZNF419                0.131   zinc finger protein 419 isoform 2 
ZNF2                  0.129   zinc finger protein 2 isoform a 
ZNF641                0.125   zinc finger protein 641 
ZNF619                0.122   zinc finger protein 619 isoform 2 
ZKSCAN5               0.120   zinc finger with KRAB and SCAN domains 5 
ZNF584                0.120   zinc finger protein 584 
ZKSCAN5               0.120   zinc finger with KRAB and SCAN domains 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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