Guide to the Human Genome
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Name: DUOX1 Sequence: fasta or formatted (1551aa) NCBI GI: 20149640
Description:

dual oxidase 1 precursor

Referenced in:

Superoxide Pathway
Thyroid and Thyroid Hormone Receptor

Other entries for this name:
alt mRNA [1551aa] dual oxidase 1 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         92           2
 C cysteine            1.8         28           2
 D aspartate           4.6         71           2
 E glutamate           6.0         93           3
 F phenylalanine       6.3         98           2
 G glycine             6.4         99           3
 H histidine           3.0         47           2
 I isoleucine          4.6         72           2
 K lysine              3.0         46           2
 L leucine            11.6        180           3
 M methionine          1.6         25           1
 N asparagine          3.0         47           2
 P proline             5.8         90           2
 Q glutamine           4.8         74           2
 R arginine            7.9        123           3
 S serine              7.5        116           2
 T threonine           4.6         71           2
 V valine              6.6        103           2
 W tryptophan          2.0         31           2
 Y tyrosine            2.9         45           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dual oxidase 1 precursor 
DUOX1                 1.000   dual oxidase 1 precursor 
DUOX2                 0.767   dual oxidase 2 precursor 
NOX3                  0.068   NADPH oxidase 3 
NOX1                  0.067   NADPH oxidase 1 isoform long 
NOX5                  0.066   NADPH oxidase, EF-hand calcium binding domain 5 [Hom...
CYBB                  0.062   cytochrome b-245 beta polypeptide 
NOX1                  0.058   NADPH oxidase 1 isoform long variant 
PXDNL                 0.044   peroxidasin homolog-like 
PXDN                  0.041   peroxidasin 
NOX4                  0.039   NADPH oxidase 4 isoform c 
NOX4                  0.039   NADPH oxidase 4 isoform a 
EPX                   0.036   eosinophil peroxidase 
TPO                   0.033   thyroid peroxidase isoform a 
TPO                   0.033   thyroid peroxidase isoform d 
MPO                   0.031   myeloperoxidase 
LPO                   0.031   lactoperoxidase isoform 3 preproprotein 
LPO                   0.031   lactoperoxidase isoform 1 preproprotein 
TPO                   0.024   thyroid peroxidase isoform b 
NOX4                  0.022   NADPH oxidase 4 isoform b 
GUCA1A                0.014   guanylate cyclase activator 1A (retina) 
TPO                   0.013   thyroid peroxidase isoform e 
PPP3R1                0.012   protein phosphatase 3, regulatory subunit B, alpha is...
NCALD                 0.012   neurocalcin delta 
NCALD                 0.012   neurocalcin delta 
NCALD                 0.012   neurocalcin delta 
NCALD                 0.012   neurocalcin delta 
NCALD                 0.012   neurocalcin delta 
NCALD                 0.012   neurocalcin delta 
NCALD                 0.012   neurocalcin delta 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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