Guide to the Human Genome
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Name: FAM84B Sequence: fasta or formatted (310aa) NCBI GI: 28557798
Description:

family with sequence similarity 84, member B

Referenced in:

Mammary Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         22           2
 C cysteine            1.3          4           1
 D aspartate           6.1         19           2
 E glutamate           8.4         26           3
 F phenylalanine       2.9          9           1
 G glycine             8.1         25           3
 H histidine           3.2         10           1
 I isoleucine          2.9          9           1
 K lysine              3.5         11           1
 L leucine             7.7         24           2
 M methionine          0.6          2           1
 N asparagine          3.5         11           1
 P proline             9.7         30           4
 Q glutamine           5.5         17           1
 R arginine            7.1         22           2
 S serine              7.1         22           3
 T threonine           3.2         10           2
 V valine              7.1         22           2
 W tryptophan          1.0          3           1
 Y tyrosine            3.9         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 84, member B 
FAM84A                0.350   family with sequence similarity 84, member A 
RARRES3               0.042   retinoic acid receptor responder (tazarotene induce...
HRASLS2               0.031   HRAS-like suppressor 2 
PLA2G16               0.029   HRAS-like suppressor 3 
PLA2G16               0.029   HRAS-like suppressor 3 
HRASLS                0.027   HRAS-like suppressor 
LBXCOR1               0.019   LBXCOR1 homolog 
AIPL1                 0.019   aryl hydrocarbon receptor interacting protein-like 1...
AIPL1                 0.019   aryl hydrocarbon receptor interacting protein-like 1...
AIPL1                 0.019   aryl hydrocarbon receptor interacting protein-like 1...
PRH1                  0.019   proline-rich protein HaeIII subfamily 1 
HRASLS5               0.018   HRAS-like suppressor family, member 5 isoform 1 [Hom...
HRASLS5               0.018   HRAS-like suppressor family, member 5 isoform 2 [Ho...
ADAMTS19              0.018   ADAM metallopeptidase with thrombospondin type 1 mo...
ABI1                  0.016   abl-interactor 1 isoform d 
ABI1                  0.016   abl-interactor 1 isoform b 
ABI1                  0.016   abl-interactor 1 isoform a 
YLPM1                 0.016   YLP motif containing 1 
RXRB                  0.016   retinoid X receptor, beta 
PRH2                  0.016   proline-rich protein HaeIII subfamily 2 
PRH2                  0.016   proline-rich protein HaeIII subfamily 2 
DAZAP1                0.015   DAZ associated protein 1 isoform a 
DAZAP1                0.015   DAZ associated protein 1 isoform b 
HRASLS5               0.015   HRAS-like suppressor family, member 5 isoform 3 [Ho...
BOD1L                 0.015   biorientation of chromosomes in cell division 1-like...
WIPF2                 0.015   WIRE protein 
LRAT                  0.013   lecithin retinol acyltransferase 
C2orf55               0.013   hypothetical protein LOC343990 
BRD4                  0.013   bromodomain-containing protein 4 isoform long 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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