Guide to the Human Genome
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Name: PLA2G16 Sequence: fasta or formatted (162aa) NCBI GI: 189571618
Description:

HRAS-like suppressor 3

Referenced in:

Lipid Metabolism
Ras

Other entries for this name:
alt mRNA [162aa] HRAS-like suppressor 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         17           2
 C cysteine            1.2          2           1
 D aspartate           5.6          9           2
 E glutamate           6.2         10           2
 F phenylalanine       2.5          4           1
 G glycine             6.8         11           1
 H histidine           2.5          4           1
 I isoleucine          6.2         10           2
 K lysine              6.8         11           2
 L leucine             7.4         12           2
 M methionine          3.1          5           1
 N asparagine          3.1          5           2
 P proline             5.6          9           2
 Q glutamine           3.7          6           1
 R arginine            5.6          9           1
 S serine              6.8         11           1
 T threonine           1.2          2           1
 V valine              9.9         16           2
 W tryptophan          0.6          1           1
 Y tyrosine            4.9          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HRAS-like suppressor 3 
PLA2G16               1.000   HRAS-like suppressor 3 
HRASLS2               0.660   HRAS-like suppressor 2 
RARRES3               0.467   retinoic acid receptor responder (tazarotene induce...
HRASLS                0.410   HRAS-like suppressor 
HRASLS5               0.377   HRAS-like suppressor family, member 5 isoform 1 [Hom...
HRASLS5               0.377   HRAS-like suppressor family, member 5 isoform 2 [Ho...
HRASLS5               0.277   HRAS-like suppressor family, member 5 isoform 3 [Ho...
LRAT                  0.100   lecithin retinol acyltransferase 
FAM84B                0.060   family with sequence similarity 84, member B 
FAM84A                0.030   family with sequence similarity 84, member A 
CYP2B6                0.020   cytochrome P450, family 2, subfamily B, polypeptide 6...
THEMIS                0.017   thymocyte selection pathway associated 
FBRSL1                0.007   fibrosin-like 1 
GLP1R                 0.007   glucagon-like peptide 1 receptor 
PSMD2                 0.007   proteasome 26S non-ATPase subunit 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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