Guide to the Human Genome
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Name: HRASLS Sequence: fasta or formatted (168aa) NCBI GI: 9966859
Description:

HRAS-like suppressor

Referenced in:

Lipid Metabolism
Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         12           2
 C cysteine            1.8          3           1
 D aspartate           4.2          7           1
 E glutamate           6.0         10           2
 F phenylalanine       6.5         11           1
 G glycine             7.7         13           1
 H histidine           1.2          2           1
 I isoleucine          5.4          9           2
 K lysine              4.8          8           1
 L leucine             8.3         14           2
 M methionine          1.2          2           1
 N asparagine          6.5         11           2
 P proline             6.0         10           2
 Q glutamine           3.0          5           1
 R arginine            3.6          6           1
 S serine              6.0         10           2
 T threonine           3.6          6           1
 V valine             10.1         17           2
 W tryptophan          0.6          1           1
 Y tyrosine            6.5         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HRAS-like suppressor 
PLA2G16               0.384   HRAS-like suppressor 3 
PLA2G16               0.384   HRAS-like suppressor 3 
HRASLS2               0.369   HRAS-like suppressor 2 
RARRES3               0.350   retinoic acid receptor responder (tazarotene induce...
HRASLS5               0.294   HRAS-like suppressor family, member 5 isoform 1 [Hom...
HRASLS5               0.294   HRAS-like suppressor family, member 5 isoform 2 [Ho...
HRASLS5               0.231   HRAS-like suppressor family, member 5 isoform 3 [Ho...
LRAT                  0.131   lecithin retinol acyltransferase 
FAM84B                0.053   family with sequence similarity 84, member B 
HIRA                  0.025   HIR histone cell cycle regulation defective homolog ...
PRKCI                 0.016   protein kinase C, iota 
PRKCZ                 0.016   protein kinase C, zeta isoform 1 
FAT1                  0.013   FAT tumor suppressor 1 precursor 
FAM84A                0.009   family with sequence similarity 84, member A 
CSE1L                 0.006   CSE1 chromosome segregation 1-like protein 
FBXW8                 0.006   F-box and WD repeat domain containing 8 isoform 2 [H...
FBXW8                 0.006   F-box and WD repeat domain containing 8 isoform 1 [H...
KCNH5                 0.006   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.006   potassium voltage-gated channel, subfamily H, member...
KCNH5                 0.006   potassium voltage-gated channel, subfamily H, member...
LOC647546             0.006   PREDICTED: hypothetical protein 
DHX15                 0.006   DEAH (Asp-Glu-Ala-His) box polypeptide 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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