SBDS 24763

Name: SBDS	Sequence: fasta or formatted (250aa)		NCBI GI: 28416940
Description: Shwachman-Bodian-Diamond syndrome protein		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 10 1 C cysteine 2.0 5 1 D aspartate 5.6 14 2 E glutamate 10.4 26 2 F phenylalanine 3.2 8 1 G glycine 4.8 12 1 H histidine 1.6 4 1 I isoleucine 8.0 20 1 K lysine 13.2 33 2 L leucine 8.0 20 1 M methionine 2.4 6 1 N asparagine 3.2 8 1 P proline 2.4 6 1 Q glutamine 5.2 13 2 R arginine 5.2 13 1 S serine 4.0 10 1 T threonine 5.6 14 1 V valine 9.2 23 2 W tryptophan 0.4 1 1 Y tyrosine 1.6 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 Shwachman-Bodian-Diamond syndrome protein GOLGA4 0.028 golgi autoantigen, golgin subfamily a, 4 SND1 0.021 staphylococcal nuclease domain containing 1 CEP55 0.017 centrosomal protein 55kDa CEP55 0.017 centrosomal protein 55kDa GBP3 0.017 guanylate binding protein 3 SIPA1L1 0.015 signal-induced proliferation-associated 1 like 1 [Hom... FAM50A 0.015 XAP-5 protein KTN1 0.013 kinectin 1 isoform b IQGAP2 0.013 IQ motif containing GTPase activating protein 2 [Ho... MYH11 0.013 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.013 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.013 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.013 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CTTNBP2NL 0.013 CTTNBP2 N-terminal like BOD1L 0.011 biorientation of chromosomes in cell division 1-like... GOLGB1 0.011 golgi autoantigen, golgin subfamily b, macrogolgin ... EIF3A 0.011 eukaryotic translation initiation factor 3, subunit 1... IFT81 0.011 intraflagellar transport 81-like isoform 1 IFT81 0.011 intraflagellar transport 81-like isoform 1 CCDC110 0.011 coiled-coil domain containing 110 isoform b CCDC110 0.011 coiled-coil domain containing 110 isoform a RASSF6 0.011 Ras association (RalGDS/AF-6) domain family 6 isofor... RASSF6 0.011 Ras association (RalGDS/AF-6) domain family 6 isofor... ROCK1 0.009 Rho-associated, coiled-coil containing protein kinase... GRHPR 0.009 glyoxylate reductase/hydroxypyruvate reductase CGNL1 0.009 cingulin-like 1 PAPOLG 0.009 poly(A) polymerase gamma C14orf145 0.009 hypothetical protein LOC145508 AKAP9 0.009 A-kinase anchor protein 9 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.