IFT81 13860

Name: IFT81	Sequence: fasta or formatted (676aa)		NCBI GI: 219555661
Description: intraflagellar transport 81-like isoform 1		Referenced in: Additional Structural Proteins
Other entries for this name: alt mRNA [676aa] intraflagellar transport 81-like isoform 1 alt prot [431aa] intraflagellar transport 81-like isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 36 3 C cysteine 0.9 6 1 D aspartate 3.6 24 2 E glutamate 13.2 89 3 F phenylalanine 2.5 17 1 G glycine 2.8 19 2 H histidine 1.6 11 1 I isoleucine 5.0 34 2 K lysine 11.8 80 3 L leucine 11.4 77 2 M methionine 3.6 24 2 N asparagine 3.6 24 1 P proline 1.9 13 1 Q glutamine 8.7 59 3 R arginine 6.5 44 2 S serine 6.4 43 2 T threonine 3.7 25 1 V valine 4.3 29 2 W tryptophan 0.4 3 1 Y tyrosine 2.8 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 intraflagellar transport 81-like isoform 1 IFT81 1.000 intraflagellar transport 81-like isoform 1 IFT81 0.576 intraflagellar transport 81-like isoform 2 CCDC18 0.061 sarcoma antigen NY-SAR-41 LOC283685 0.051 PREDICTED: golgi autoantigen, golgin subfamily a-li... CENPE 0.051 centromere protein E NUMA1 0.050 nuclear mitotic apparatus protein 1 C14orf145 0.050 hypothetical protein LOC145508 CCDC88A 0.049 coiled-coil domain containing 88A isoform 2 CCDC88A 0.049 coiled-coil domain containing 88A isoform 1 LOC283685 0.048 PREDICTED: golgi autoantigen, golgin subfamily a-li... TCHH 0.048 trichohyalin MYH13 0.048 myosin, heavy polypeptide 13, skeletal muscle [Homo... PMFBP1 0.045 polyamine modulated factor 1 binding protein 1 isof... PMFBP1 0.045 polyamine modulated factor 1 binding protein 1 isof... EEA1 0.045 early endosome antigen 1, 162kD CEP290 0.044 centrosomal protein 290kDa ERC2 0.044 cytomatrix protein p110 DSP 0.044 desmoplakin isoform I MYH2 0.044 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.044 myosin, heavy chain 2, skeletal muscle, adult [Homo... LOC727832 0.044 golgi autoantigen, golgin subfamily a-like ROCK2 0.044 Rho-associated, coiled-coil containing protein kinas... TPR 0.044 nuclear pore complex-associated protein TPR WDR87 0.043 NYD-SP11 protein MYH9 0.043 myosin, heavy polypeptide 9, non-muscle ERC1 0.043 RAB6-interacting protein 2 isoform epsilon LOC440243 0.043 PREDICTED: Putative golgin subfamily A member 6-lik... CLIP1 0.042 restin isoform b CLIP1 0.042 restin isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.