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Search of human proteins with 28269687
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|28269687 zygote arrest 1 [Homo sapiens]
(424 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|28269687 zygote arrest 1 [Homo sapiens] 892 0.0
gi|211971095 zygote arrest 1-like [Homo sapiens] 221 7e-58
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 51 2e-06
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 50 3e-06
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 50 5e-06
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 50 5e-06
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 47 3e-05
gi|139394646 iroquois homeobox protein 5 [Homo sapiens] 47 4e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 47 4e-05
gi|19924099 synapsin I isoform Ia [Homo sapiens] 46 6e-05
gi|19924097 synapsin I isoform Ib [Homo sapiens] 46 6e-05
gi|33286446 opioid growth factor receptor [Homo sapiens] 46 7e-05
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 46 7e-05
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 45 1e-04
gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Ho... 44 2e-04
gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Ho... 44 2e-04
gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Ho... 44 2e-04
gi|48762934 alpha 2 type I collagen [Homo sapiens] 44 2e-04
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 44 2e-04
gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo ... 44 3e-04
gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo ... 44 4e-04
gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens] 43 5e-04
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 43 5e-04
gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens] 43 6e-04
gi|239745658 PREDICTED: hypothetical protein XP_002344164 [Homo ... 43 6e-04
gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens] 43 6e-04
gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens] 43 6e-04
gi|150170670 piccolo isoform 2 [Homo sapiens] 43 6e-04
>gi|28269687 zygote arrest 1 [Homo sapiens]
Length = 424
Score = 892 bits (2305), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MAALGDEVLDGYVFPACPPCSYRYPYPAATKGKGAAGGSWQQRGRGCLPASSPCSAGAAS 60
MAALGDEVLDGYVFPACPPCSYRYPYPAATKGKGAAGGSWQQRGRGCLPASSPCSAGAAS
Sbjct: 1 MAALGDEVLDGYVFPACPPCSYRYPYPAATKGKGAAGGSWQQRGRGCLPASSPCSAGAAS 60
Query: 61 LSFPGCGRLTAAEYFDSYQRERLMALLAQVGPGLGPRARRAGSCDVAVQVSPRIDAAVQC 120
LSFPGCGRLTAAEYFDSYQRERLMALLAQVGPGLGPRARRAGSCDVAVQVSPRIDAAVQC
Sbjct: 61 LSFPGCGRLTAAEYFDSYQRERLMALLAQVGPGLGPRARRAGSCDVAVQVSPRIDAAVQC 120
Query: 121 SLGRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVA 180
SLGRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVA
Sbjct: 121 SLGRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVA 180
Query: 181 VYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSD 240
VYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSD
Sbjct: 181 VYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSD 240
Query: 241 DDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAA 300
DDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAA
Sbjct: 241 DDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAA 300
Query: 301 VAGEGPSPRSPELGKERLRFQFLEQKYGYYHCKDCNIRWESAYVWCVQGTNKVYFKQFCR 360
VAGEGPSPRSPELGKERLRFQFLEQKYGYYHCKDCNIRWESAYVWCVQGTNKVYFKQFCR
Sbjct: 301 VAGEGPSPRSPELGKERLRFQFLEQKYGYYHCKDCNIRWESAYVWCVQGTNKVYFKQFCR 360
Query: 361 TCQKSYNPYRVEDITCQSCKQTRCSCPVKLRHVDPKRPHRQDLCGRCKGKRLSCDSTFSF 420
TCQKSYNPYRVEDITCQSCKQTRCSCPVKLRHVDPKRPHRQDLCGRCKGKRLSCDSTFSF
Sbjct: 361 TCQKSYNPYRVEDITCQSCKQTRCSCPVKLRHVDPKRPHRQDLCGRCKGKRLSCDSTFSF 420
Query: 421 KYII 424
KYII
Sbjct: 421 KYII 424
>gi|211971095 zygote arrest 1-like [Homo sapiens]
Length = 321
Score = 221 bits (564), Expect = 7e-58
Identities = 137/353 (38%), Positives = 168/353 (47%), Gaps = 96/353 (27%)
Query: 76 DSYQRERLMALLAQVGPGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQR----RA 131
D Y+R +L A+L+Q+ P L PR + + +V VQVSPR+D AVQCSLG RTL
Sbjct: 61 DPYKRAQLKAILSQMNPSLSPRLCKPNTKEVGVQVSPRVDKAVQCSLGPRTLSSCSPWDG 120
Query: 132 RDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLT 191
RDP+ P G S RRGL + LRR
Sbjct: 121 RDPQEP-------LPACGVTSPATGRRGL------------------------IRLRR-- 147
Query: 192 AFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRA 251
DG+ A L GP E + P R D E +
Sbjct: 148 ------------------DGDEAESKA-LPGPAEAS--QPQPPSRRSGADRQEEPGQLEE 186
Query: 252 SWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPRSP 311
S E+ A P+ + G+AA LR P
Sbjct: 187 SGEKDAPCPQETKSKQVPGDAA-SEPLRRP------------------------------ 215
Query: 312 ELGKERLRFQFLEQKYGYYHCKDCNIRWESAYVWCVQGTNKVYFKQFCRTCQKSYNPYRV 371
FQFLE KYGY+HCKDC RWESAYVWC+ GTNKVYFKQ C CQKS+NPYRV
Sbjct: 216 -------NFQFLEPKYGYFHCKDCKTRWESAYVWCISGTNKVYFKQLCCKCQKSFNPYRV 268
Query: 372 EDITCQSCKQTRCSCPVKLRHVDPKRPHRQDLCGRCKGKRLSCDSTFSFKYII 424
E I CQ+C ++ CSCP K RH+D +RPHRQ+LCGRCK KR SC + +SFKY++
Sbjct: 269 EAIQCQTCSKSHCSCPQKKRHIDLRRPHRQELCGRCKDKRFSCGNIYSFKYVM 321
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 50.8 bits (120), Expect = 2e-06
Identities = 52/188 (27%), Positives = 67/188 (35%), Gaps = 25/188 (13%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAF 193
P SP GPG++G G + R G S G P M FP
Sbjct: 539 PGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGG 598
Query: 194 LEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASW 253
GPGP ++G + G +GPP G ++G+ P PQ
Sbjct: 599 PGGPGPQGPPGKNGET-GPQGPPGPTGPGGDKGDT----GPPGPQG-------------- 639
Query: 254 EQPADGPELPPRE-AQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGE-----GPS 307
Q G PP E + GE P+ +PG P G A G+ +AG G
Sbjct: 640 LQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAG 699
Query: 308 PRSPELGK 315
P PE GK
Sbjct: 700 PPGPEGGK 707
Score = 42.7 bits (99), Expect = 6e-04
Identities = 55/203 (27%), Positives = 68/203 (33%), Gaps = 37/203 (18%)
Query: 132 RDPESPAG-PGAEGTTGGGSFSQQPSRRGL--EQGSP-------QNGAPRPMRFPRTVAV 181
R P P G PG GT G P GL GSP +NG+P P
Sbjct: 992 RGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGP 1051
Query: 182 YSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPP-PARLQGPEEGEVWTKKAPRRPQSD 240
P+ GP +G++ GE GP PA GP P+ P+ D
Sbjct: 1052 PGPV----------GPAGKSGDR------GESGPAGPAGAPGPAGSR--GAPGPQGPRGD 1093
Query: 241 DDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQP-------PSAGRARDG 293
GE A + P P G A + A+ SPG PS +DG
Sbjct: 1094 K-GETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDG 1152
Query: 294 GDGREAAVAGEGPSPRSPELGKE 316
G + GP E G E
Sbjct: 1153 TSGHPGPIGPPGPRGNRGERGSE 1175
Score = 41.2 bits (95), Expect = 0.002
Identities = 52/188 (27%), Positives = 63/188 (33%), Gaps = 28/188 (14%)
Query: 134 PESPAG----PGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRR 189
P PAG PG+ G +G + QP E+GSP GA P P + + R
Sbjct: 904 PPGPAGNTGAPGSPGVSGPKGDAGQPG----EKGSP--GAQGPPGAPGPLGIAGITGARG 957
Query: 190 LTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAV 249
L PGP G GE G P A E G + P G A A
Sbjct: 958 LAGPPGMPGPRGSPGPQGVK-GESGKPGANGLSGERGPPGPQGLP--------GLAGTAG 1008
Query: 250 RASWEQPADGPELPPREAQEGEAAPRSALRSPGQPP---------SAGRARDGGDGREAA 300
+ LP R+ G R SPG P G A GD E+
Sbjct: 1009 EPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESG 1068
Query: 301 VAGEGPSP 308
AG +P
Sbjct: 1069 PAGPAGAP 1076
Score = 37.4 bits (85), Expect = 0.026
Identities = 58/211 (27%), Positives = 72/211 (34%), Gaps = 39/211 (18%)
Query: 135 ESPAG-PGAEGTTGGGSFSQQPSRRGLEQGSP----------QNGAPRPMRFPRTVAVYS 183
+ PAG PG G G F + +G E G+P +NGAP PM PR
Sbjct: 251 KGPAGIPGFPGMKGHRGFDGRNGEKG-ETGAPGLKGENGLPGENGAPGPMG-PRGAPG-- 306
Query: 184 PLALRRLTAFLEGPGPAAGEQRSGASDGERGP--PPARLQGP----EEGEVWTKKAP-RR 236
R L G A G + SDG+ GP PP P +GEV +P
Sbjct: 307 ----ERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGSN 362
Query: 237 PQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSP------GQPPSAG-- 288
GE A + P P + +GE P +P G P AG
Sbjct: 363 GAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAGAN 422
Query: 289 -----RARDGGDGREAAVAGEGPSPRSPELG 314
R G G+ A GP E G
Sbjct: 423 GAPGLRGGAGEPGKNGAKGEPGPRGERGEAG 453
Score = 36.2 bits (82), Expect = 0.058
Identities = 45/182 (24%), Positives = 57/182 (31%), Gaps = 36/182 (19%)
Query: 137 PAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEG 196
P PGA+G G +P GL + + GAP R P G
Sbjct: 455 PGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAP-GFRGP------------------AG 495
Query: 197 PGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQP 256
P GE+ G GP R E G G + S P
Sbjct: 496 PNGIPGEKGPAGERGAPGPAGPRGAAGEPGR----------DGVPGGPGMRGMPGSPGGP 545
Query: 257 -ADGPELPP-REAQEGEAAPRSALRSPGQPPSAG----RARDGGDGREAAVAGE-GPSPR 309
+DG PP + + G P GQP G + DG G+ G GP P+
Sbjct: 546 GSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQ 605
Query: 310 SP 311
P
Sbjct: 606 GP 607
Score = 36.2 bits (82), Expect = 0.058
Identities = 52/216 (24%), Positives = 71/216 (32%), Gaps = 43/216 (19%)
Query: 133 DPESPAGPGAEGTTGGG------------SFSQQPSRRGLEQGSP--------------- 165
D P GPGA+G G + QP +G E G+P
Sbjct: 742 DKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKG-EGGAPGLPGIAGPRGSPGER 800
Query: 166 -QNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPP----PARL 220
+ G P P FP + G A GE+ G G GPP PA
Sbjct: 801 GETGPPGPAGFPGAPGQNGEPGGK-------GERGAPGEKGEGGPPGVAGPPGGSGPAGP 853
Query: 221 QGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPP-REAQEGEAAPRSALR 279
GP +G + +P P + A+ GP P ++G P
Sbjct: 854 PGP-QGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPSGSPGKDGPPGPAGNTG 912
Query: 280 SPGQPPSAGRARDGGD-GREAAVAGEGPSPRSPELG 314
+PG P +G D G G + + +GP LG
Sbjct: 913 APGSPGVSGPKGDAGQPGEKGSPGAQGPPGAPGPLG 948
Score = 35.0 bits (79), Expect = 0.13
Identities = 53/192 (27%), Positives = 65/192 (33%), Gaps = 33/192 (17%)
Query: 134 PESPAG----PGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRR 189
P P G PG G G +P +G + G+P GAP P L
Sbjct: 634 PPGPQGLQGLPGTGGPPGENGKPGEPGPKG-DAGAP--GAPGGKGDAGAPGERGPPGLAG 690
Query: 190 LTAFLEGPGPAAGEQRSGASDGERGPPPAR----LQG-PEEGEVWTKKAPRRPQSDDDGE 244
G GP E GA+ G GPP A LQG P E P+ D GE
Sbjct: 691 APGLRGGAGPPGPEGGKGAA-GPPGPPGAAGTPGLQGMPGERGGLGSPGPK----GDKGE 745
Query: 245 AQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAG- 303
P P + G+ PR G P AG+ D G+G + G
Sbjct: 746 ---------------PGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGI 790
Query: 304 EGPSPRSPELGK 315
GP E G+
Sbjct: 791 AGPRGSPGERGE 802
Score = 33.9 bits (76), Expect = 0.29
Identities = 49/195 (25%), Positives = 62/195 (31%), Gaps = 27/195 (13%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGL--------EQGSPQNGAPRPMRFPRTVAVYSPL 185
P SP G G G + P +RG QG P G P P P
Sbjct: 344 PGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPP--GPPGINGSPGGKGEMGPA 401
Query: 186 ALRRLTAFLEG---PGPA-----------AGEQRSGASDGERGPPPARLQGPEEGEVWTK 231
+ + PGPA AGE + GE GP R + G K
Sbjct: 402 GIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAK 461
Query: 232 KAPRRPQSDDDGEAQAAVRASWEQPADGPELPP-REAQEGEAAPRSALRSPGQPPSAGRA 290
+ S + A A+ E+ A G P GE P +PG P+ R
Sbjct: 462 GEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPG--PAGPRG 519
Query: 291 RDGGDGREAAVAGEG 305
G GR+ G G
Sbjct: 520 AAGEPGRDGVPGGPG 534
Score = 30.8 bits (68), Expect = 2.4
Identities = 55/215 (25%), Positives = 67/215 (31%), Gaps = 38/215 (17%)
Query: 123 GRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPM------RFP 176
G L+ A P G GA G G + P +G+ G+P P P
Sbjct: 690 GAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGP 749
Query: 177 RTVAVYSPLALRRLTAFLEGPGPA-----------------AGEQRSGASDGERGPP-PA 218
V R T + PGPA AG + S GE GPP PA
Sbjct: 750 GADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGIAGPRGSPGERGETGPPGPA 809
Query: 219 RLQGP--EEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRS 276
G + GE K P +G + GP PP G +
Sbjct: 810 GFPGAPGQNGEPGGKGERGAPGEKGEGGPPG---VAGPPGGSGPAGPP-----GPQGVKG 861
Query: 277 ALRSPGQPPSAG----RARDGGDGREAAVAGEGPS 307
SPG P +AG R G G GPS
Sbjct: 862 ERGSPGGPGAAGFPGARGLPGPPGSNGNPGPPGPS 896
Score = 28.9 bits (63), Expect = 9.2
Identities = 45/188 (23%), Positives = 63/188 (33%), Gaps = 36/188 (19%)
Query: 130 RARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRR 189
R DP P PG+ G+ G + PQN +P+ + V S +A+
Sbjct: 119 RNGDPGIPGQPGSPGSPGPPGICESCPT------GPQNYSPQYDSYD----VKSGVAVGG 168
Query: 190 LTAFLEGPGPA-----------AGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQ 238
L + PGPA +G S S G +GPP E G+ P P
Sbjct: 169 LAGY---PGPAGPPGPPGPPGTSGHPGSPGSPGYQGPP------GEPGQAGPSGPPGPP- 218
Query: 239 SDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAG-RARDGGDGR 297
G + A + + P P G + PG P G R DG +G
Sbjct: 219 ----GAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGE 274
Query: 298 EAAVAGEG 305
+ G
Sbjct: 275 KGETGAPG 282
Score = 28.9 bits (63), Expect = 9.2
Identities = 27/108 (25%), Positives = 36/108 (33%), Gaps = 5/108 (4%)
Query: 131 ARDPESPAGP-GAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRR 189
+R P GP G +G TG + RG G+P P + P R
Sbjct: 1081 SRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRG 1140
Query: 190 LTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRP 237
GP G+ + G GPP R E G + P +P
Sbjct: 1141 PV----GPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQP 1184
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 50.4 bits (119), Expect = 3e-06
Identities = 54/186 (29%), Positives = 67/186 (36%), Gaps = 12/186 (6%)
Query: 132 RDPESPAGP-GAEGTTGGGSFSQQPSRRGL--EQGSP----QNGAPRPMRFPRTVAVYSP 184
R PAGP G+ G G + P +GL GSP + G P P P
Sbjct: 511 RGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGP 570
Query: 185 LALRRLTAFLEGPGP--AAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDD 242
R + PGP AAGE G GPP A ++GE + P +
Sbjct: 571 PGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGE 630
Query: 243 GEAQAAVRASWEQPADGPELPPREA-QEGEAAPRSALRSPGQPPSAGRARDGGDGREAAV 301
Q + Q GP PP EA + GE L +PG PS R G G
Sbjct: 631 RGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPG--PSGARGERGFPGERGVQ 688
Query: 302 AGEGPS 307
GP+
Sbjct: 689 GPPGPA 694
Score = 44.7 bits (104), Expect = 2e-04
Identities = 54/194 (27%), Positives = 66/194 (34%), Gaps = 10/194 (5%)
Query: 132 RDPESPAG-PGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRL 190
R PAG PG G G + + G + + G P P V R
Sbjct: 910 RGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGE 969
Query: 191 TAFLEGPGPAA--GEQRSGASDGERGPP----PARLQGPEEGEVWTKKAPRRPQSDD-DG 243
F PGP+ G+Q + GERGPP P L GP GE + AP S DG
Sbjct: 970 RGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGP-PGESGREGAPGAEGSPGRDG 1028
Query: 244 EAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGD-GREAAVA 302
A PA P P G P G+ AG A G G
Sbjct: 1029 SPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAG 1088
Query: 303 GEGPSPRSPELGKE 316
+GP E G++
Sbjct: 1089 PQGPRGDKGETGEQ 1102
Score = 41.2 bits (95), Expect = 0.002
Identities = 55/192 (28%), Positives = 67/192 (34%), Gaps = 20/192 (10%)
Query: 131 ARDPESPAGP-GAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRR 189
A P P GP G G G + +P R G E+G P R + P T + R
Sbjct: 213 ASGPMGPRGPPGPPGKNGDDGEAGKPGRPG-ERGPPGPQGARGL--PGTAGLPGMKGHRG 269
Query: 190 LTAFLEGPGPA--AGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQS-DDDGEAQ 246
+ G A AG + S GE G P GE AP + +DG
Sbjct: 270 FSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATG 329
Query: 247 AAVRASWEQPADGPELPPREAQEGEAAPRSALRS---------PGQPPSAGRA----RDG 293
AA PA P P +GEA P+ S PG P AG A G
Sbjct: 330 AAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPG 389
Query: 294 GDGREAAVAGEG 305
DG+ A G
Sbjct: 390 ADGQPGAKGANG 401
Score = 41.2 bits (95), Expect = 0.002
Identities = 54/198 (27%), Positives = 71/198 (35%), Gaps = 45/198 (22%)
Query: 131 ARDPESPAGP----GAEGTTGGGSFSQQPSRRGL--EQGSP-QNGAPRPMRFPRTVAVYS 183
A+ P PAGP G +G G F P G E G P + G P + P
Sbjct: 618 AQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAP------- 670
Query: 184 PLALRRLTAFLEGPGPAAGEQRSGASDGERGPP-PARLQGPE-----EGEVWTKKAPRRP 237
GP A GE+ G +GPP PA +G +G AP P
Sbjct: 671 ------------GPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAP 718
Query: 238 QSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGR 297
S Q E+ A G LP + G+A P+ A SPG +DG G
Sbjct: 719 GSQGAPGLQGM---PGERGAAG--LPGPKGDRGDAGPKGADGSPG--------KDGVRGL 765
Query: 298 EAAVAGEGPSPRSPELGK 315
+ GP+ + G+
Sbjct: 766 TGPIGPPGPAGAPGDKGE 783
Score = 39.7 bits (91), Expect = 0.005
Identities = 54/206 (26%), Positives = 70/206 (33%), Gaps = 32/206 (15%)
Query: 134 PESPAGPGAEGTTG-GGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTA 192
P P PG G G GG+F+ Q S E+ + P PM + P
Sbjct: 141 PGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQG 200
Query: 193 FLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWT-----KKAPRRPQ--------- 238
F +GP GE + G RGPP + ++GE ++ P PQ
Sbjct: 201 F-QGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTA 259
Query: 239 -----------SDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSA 287
S DG A A P P P G+ PR G+P +
Sbjct: 260 GLPGMKGHRGFSGLDGAKGDAGPAG---PKGEPGSPGENGAPGQMGPRGLPGERGRPGAP 316
Query: 288 GRA-RDGGDGREAAVAGEGPS-PRSP 311
G A G DG A GP+ P P
Sbjct: 317 GPAGARGNDGATGAAGPPGPTGPAGP 342
Score = 39.7 bits (91), Expect = 0.005
Identities = 74/292 (25%), Positives = 96/292 (32%), Gaps = 61/292 (20%)
Query: 25 PYPAATKGKGAAGGSWQQRGRGCLPASSPCSAGAASLS-FPGCGRLTAAEYFDSYQRERL 83
P PA +G A G+ +G P + P S GA L PG ER
Sbjct: 691 PGPAGPRGANGAPGNDGAKGDAGAPGA-PGSQGAPGLQGMPG---------------ERG 734
Query: 84 MALLAQVGPGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPAGPGAE 143
A L GP+ R + SP D G R L P PG +
Sbjct: 735 AAGLP------GPKGDRGDAGPKGADGSPGKD-------GVRGLTGPIGPPGPAGAPGDK 781
Query: 144 GTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGE 203
G +G + RG + G P P F +G A GE
Sbjct: 782 GESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGA-------------DGQPGAKGE 828
Query: 204 QRSGASDGERGPP-PARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPEL 262
+ G+ GPP PA GP G + AP A+ A ++ A G
Sbjct: 829 PGDAGAKGDAGPPGPAGPAGPP-GPIGNVGAPG---------AKGARGSAGPPGATG--F 876
Query: 263 PPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPRSPELG 314
P + G P PG P AG ++GG G GP+ R E+G
Sbjct: 877 PGAAGRVGPPGPSGNAGPPGPPGPAG--KEGGKGPRGET---GPAGRPGEVG 923
Score = 37.7 bits (86), Expect = 0.020
Identities = 52/194 (26%), Positives = 66/194 (34%), Gaps = 26/194 (13%)
Query: 134 PESPAGPGAEGTTG-----GGSFSQQPSRRGLEQGSP-QNGAPRPMRFPRTVAVYSPLAL 187
P + PG +G G G P+ E GSP +NGAP M P L
Sbjct: 256 PGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQM---------GPRGL 306
Query: 188 RRLTAFLEGPGPAAGEQRSGASDGERGPP-PARLQGPE--EGEVWTK--KAPRRPQSDDD 242
PGPA GA+ G GPP P GP G V K P+ P+ +
Sbjct: 307 PGERGRPGAPGPAGARGNDGAT-GAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEG 365
Query: 243 -----GEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGR 297
GE A PA P + +G +PG P + G + G G
Sbjct: 366 PQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGG 425
Query: 298 EAAVAGEGPSPRSP 311
G P +P
Sbjct: 426 PPGPKGNSGEPGAP 439
Score = 37.4 bits (85), Expect = 0.026
Identities = 59/200 (29%), Positives = 71/200 (35%), Gaps = 31/200 (15%)
Query: 140 PGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPL--ALRRLTAFLEGP 197
PGA G+ G P RG G P R P+ A SP +R LT + P
Sbjct: 715 PGAPGSQGAPGLQGMPGERGAA-GLPGPKGDRGDAGPKG-ADGSPGKDGVRGLTGPIGPP 772
Query: 198 GPAA--GEQRSGASDGERGPPPARLQGPEEGE---------VWTKKAPRRP-QSDDDGEA 245
GPA G++ G GP AR + GE A +P + G+A
Sbjct: 773 GPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDA 832
Query: 246 QAAVRASWEQPADGPELPP----------REAQEGEAAPRSALRSPGQPPSAGRARDGGD 295
A A PA GP PP + G A P A PG +AGR G
Sbjct: 833 GAKGDAGPPGPA-GPAGPPGPIGNVGAPGAKGARGSAGPPGATGFPG---AAGRVGPPGP 888
Query: 296 GREAAVAGEGPSPRSPELGK 315
A G P P E GK
Sbjct: 889 SGNAGPPGP-PGPAGKEGGK 907
Score = 36.2 bits (82), Expect = 0.058
Identities = 53/216 (24%), Positives = 72/216 (33%), Gaps = 26/216 (12%)
Query: 110 VSPRIDAAVQCSLGRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGA 169
V + +A Q G Q +P P GA G G QP +G GA
Sbjct: 349 VGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGA 408
Query: 170 PRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGASDGERG----PPPARLQGP-- 223
P FP P GP +GE + S G+ G P P +QGP
Sbjct: 409 P---GFPGARGPSGPQG----PGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPG 461
Query: 224 ---EEGEVWTKKAP-----RRPQSDDDGEAQAAVRASWEQPADGPELPPRE-AQEGEAAP 274
EEG+ + P P + G + GP+ P E G A P
Sbjct: 462 PAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGA--DGVAGPKGPAGERGSPGPAGP 519
Query: 275 RSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPRS 310
+ + G+P AG G G + GP ++
Sbjct: 520 KGSPGEAGRPGEAG--LPGAKGLTGSPGSPGPDGKT 553
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 49.7 bits (117), Expect = 5e-06
Identities = 85/319 (26%), Positives = 117/319 (36%), Gaps = 54/319 (16%)
Query: 27 PAATK---GKGAAGGSWQQRGRGCLPASSPCSAGAASLSFPGCGRLTAAEYFDSYQRERL 83
P A K GK +GG + R RG AGA S GR A+ + + R
Sbjct: 432 PKAAKSRGGKSRSGGGKKPRRRGQKARQKAAEAGAESRGDKKQGRQKASA---AGTKSRG 488
Query: 84 MALLAQVGPGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPAGPGAE 143
L + G L R ++A + + AA S GR+ +R + PA GA+
Sbjct: 489 GGLKSHSGKNLWRRGQKAEA------AGEKATAAGAKSRGRKQPRR-----QKPAVAGAK 537
Query: 144 GTTGGGSFSQQPSR---------RGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFL 194
GG Q+ G + S G +P ++ +T A A +
Sbjct: 538 SRVGGSKSRQRQKAVAAGATSHGGGGNKQSRGGGGNKPRQWGQTAA-----AAKTRGGGD 592
Query: 195 EGPG---PAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRA 251
+ PG AAG +S + DG G R + G KK RR Q D AA
Sbjct: 593 KQPGWQKAAAGVTKSRSGDG--GKKAWRQKAAGTGAKSRKKPWRRGQKD-----AAAAEK 645
Query: 252 SWEQPA----DGPELPPREAQEGEAAPRSALRSPGQ------PPSAGRARDGGDGREAAV 301
+W A G + P + + SA + GQ P RA+ GDG + A
Sbjct: 646 AWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQEAEARKKPRRRRAKSRGDGGQNAA 705
Query: 302 AGEGPSPR---SPELGKER 317
G P R P LGK R
Sbjct: 706 VGINPWQRRGKKPRLGKSR 724
Score = 41.2 bits (95), Expect = 0.002
Identities = 76/290 (26%), Positives = 112/290 (38%), Gaps = 42/290 (14%)
Query: 33 KGAAGGSWQQRGRGCLPASSPCSAGAASLSFPGCGRLTAAEYFDSYQRER---LMALLAQ 89
K AA GS + R R A +AG+ + G + AA S E+ A A+
Sbjct: 129 KAAATGSKKPRWR----AQKSAAAGSKNRG-AGAQKAAAAAGVKSQGGEKPQKAAAAGAK 183
Query: 90 VGPGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPAGPGAEGTTGGG 149
G PR R A S + + +A + R +++ R P+ PA GA+ GGG
Sbjct: 184 SRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPK-PAAGGAKSRRGGG 242
Query: 150 SFSQQPSRRGLEQ--------GSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAA 201
Q+ RRG + G + G + +R A + A RR A A
Sbjct: 243 KKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAG-AKRRGAA-------TA 294
Query: 202 GEQRSGASDGERGPPPARLQGP----------EEGEVWTKKAPRRPQSDDDGEAQAA--- 248
GE+ + G RGP Q P G+ TK A + G+ +AA
Sbjct: 295 GEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVVG 354
Query: 249 VRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGRE 298
V++ +Q G + PR + A +S R G A+ GDGR+
Sbjct: 355 VKSRKKQRRRGKK--PRRQKASAAGAKS--RGGGDKKGLREAKRRGDGRK 400
Score = 30.8 bits (68), Expect = 2.4
Identities = 43/188 (22%), Positives = 70/188 (37%), Gaps = 38/188 (20%)
Query: 142 AEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAA 201
A GT G ++P RRG + + + PR R ++ A S + A + AA
Sbjct: 110 AAGTKSLGGRGRKPRRRGQKAAATGSKKPR-WRAQKSAAAGS----KNRGAGAQKAAAAA 164
Query: 202 GEQRSGASDGER----------GPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRA 251
G + G ++ G P R G+ KK +R G+ + R
Sbjct: 165 GVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDE-DKKGRQREAKSRFGKTRGGRRK 223
Query: 252 SWEQP----------ADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGD------ 295
+P G + P ++ + G+ A + G G++R GGD
Sbjct: 224 KHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKA------ATGGKSRVGKSRGGGDKKLRRQ 277
Query: 296 GREAAVAG 303
G+ AA+AG
Sbjct: 278 GQNAALAG 285
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 49.7 bits (117), Expect = 5e-06
Identities = 51/197 (25%), Positives = 64/197 (32%), Gaps = 20/197 (10%)
Query: 130 RARDPESPAG-PGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSP---- 184
++R P SP G P GG P G QG P G RP P P
Sbjct: 86 KSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQG 145
Query: 185 ---LALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDD 241
+ R +GP P G Q G PPP + QGP + P P
Sbjct: 146 DKSRSPRSPPGKPQGPPPQGGNQPQGPP-----PPPGKPQGPPPQGGKKPQGPPPPGKPQ 200
Query: 242 DGEAQAAVRASWEQPADGPE-LPPREAQEGEAAPRSALRSPGQPPSAGRARDG------G 294
Q S + P P+ PP+ + + P + G PP G G
Sbjct: 201 GPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP 260
Query: 295 DGREAAVAGEGPSPRSP 311
G A + S RSP
Sbjct: 261 QGPPAQGGSKSQSARSP 277
Score = 46.2 bits (108), Expect = 6e-05
Identities = 46/187 (24%), Positives = 63/187 (33%), Gaps = 35/187 (18%)
Query: 130 RARDPESPAG-PGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSP---- 184
++R P SP G P GG P G QG P G +P P P
Sbjct: 147 KSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQG 206
Query: 185 ---LALRRLTAFLEGPGPAAGEQRSG---------------ASDGERGPPPARLQGPEEG 226
+ + +GP P G Q G + + PPP + QGP
Sbjct: 207 DKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQ 266
Query: 227 EVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREA----QEGEAAPRSALRSPG 282
++ R P G Q Q + P+ PP A Q+ +A P + P
Sbjct: 267 GGSKSQSARSPPGKPQGPPQ--------QEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPP 318
Query: 283 QPPSAGR 289
+PP GR
Sbjct: 319 RPPQGGR 325
Score = 42.4 bits (98), Expect = 8e-04
Identities = 48/182 (26%), Positives = 62/182 (34%), Gaps = 25/182 (13%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAF 193
P P GP +G G+ Q P G QG P G R PR SP
Sbjct: 54 PGKPQGPPPQG----GNKPQGPPPPGKPQGPPPQG--DKSRSPR-----SP------PGK 96
Query: 194 LEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASW 253
+GP P G Q G PPP + QGP + P P Q S
Sbjct: 97 PQGPPPQGGNQPQGPP-----PPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSP 151
Query: 254 EQPADGPE-LPPREAQEGEAAPRSALRSPGQPPSAGRARDG--GDGREAAVAGEGPSPRS 310
P P+ PP+ + + P + G PP G+ G G+ +G RS
Sbjct: 152 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRS 211
Query: 311 PE 312
+
Sbjct: 212 SQ 213
Score = 39.7 bits (91), Expect = 0.005
Identities = 42/160 (26%), Positives = 54/160 (33%), Gaps = 25/160 (15%)
Query: 136 SPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLE 195
+P GP +G G P G QG P G +P P +
Sbjct: 35 NPQGPSPQG---GNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP-------------Q 78
Query: 196 GPGPAAGEQRSGASDGERGPPPARLQG-PEEGEVWTKKAPRRPQSDDDGEAQAAVRASWE 254
GP P + RS S PP + QG P +G + P P Q R
Sbjct: 79 GPPPQGDKSRSPRS------PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGP 132
Query: 255 QPADGPELPPREAQEGEAAPRSALRSP-GQPPSAGRARDG 293
P P+ PP + + +PRS P G PP G G
Sbjct: 133 PPPGKPQGPPPQGDKSR-SPRSPPGKPQGPPPQGGNQPQG 171
Score = 38.5 bits (88), Expect = 0.012
Identities = 33/123 (26%), Positives = 39/123 (31%), Gaps = 11/123 (8%)
Query: 195 EGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWE 254
+GP P G + G PPP + QGP + P P Q S
Sbjct: 37 QGPSPQGGNKPQGPP-----PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPR 91
Query: 255 QPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGP------SP 308
P P+ PP + P P PP G R G G P SP
Sbjct: 92 SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSP 151
Query: 309 RSP 311
RSP
Sbjct: 152 RSP 154
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 47.4 bits (111), Expect = 3e-05
Identities = 40/164 (24%), Positives = 54/164 (32%), Gaps = 30/164 (18%)
Query: 130 RARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRR 189
+ + P P P GG S G QG P G +P P
Sbjct: 273 KPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPP----------- 321
Query: 190 LTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAV 249
PG G G + + PPP + QGP ++ R P G Q
Sbjct: 322 -------PGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQ--- 371
Query: 250 RASWEQPADGPELPPREA----QEGEAAPRSALRSPGQPPSAGR 289
Q + P+ PP A Q+ +A P + P +PP GR
Sbjct: 372 -----QEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGR 410
Score = 42.4 bits (98), Expect = 8e-04
Identities = 42/167 (25%), Positives = 55/167 (32%), Gaps = 21/167 (12%)
Query: 130 RARDPESPAG-PGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALR 188
++R P SP G P GG P G QG P G +P P P
Sbjct: 107 KSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP---- 162
Query: 189 RLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPE-EGEVWTKKAPRRPQSDDDGEAQA 247
P G+ +S +S PP + QGP +G + P P Q
Sbjct: 163 ----------PPQGDNKSRSSRS----PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 208
Query: 248 AVRASWEQPADGPELPPREAQEGEAAPRSALRSP-GQPPSAGRARDG 293
+ P P+ PP + + RS P G PP G G
Sbjct: 209 GNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQG 255
Score = 42.4 bits (98), Expect = 8e-04
Identities = 43/175 (24%), Positives = 55/175 (31%), Gaps = 16/175 (9%)
Query: 130 RARDPESPAG-PGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSP---- 184
++R SP G P GG P G QG P G +P P P
Sbjct: 169 KSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 228
Query: 185 ----LALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSD 240
+ R +GP P G Q G PPP + QGP + P P
Sbjct: 229 DNKSQSARSPPGKPQGPPPQGGNQPQGPP-----PPPGKPQGPPPQGGNKPQGPPPPGKP 283
Query: 241 DDGEAQAAV--RASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDG 293
Q R+S P PP+ + + P + G PP G G
Sbjct: 284 QGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 338
Score = 40.8 bits (94), Expect = 0.002
Identities = 50/209 (23%), Positives = 70/209 (33%), Gaps = 29/209 (13%)
Query: 105 DVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGS 164
DV+ + SP + A + + P P P GG P G QG
Sbjct: 22 DVSQEESPSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 81
Query: 165 PQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPE 224
P G +P P +GP P + RS S PP + QGP
Sbjct: 82 PPQGGNKPQGPPPPGKP-------------QGPPPQGDKSRSPRS------PPGKPQGPP 122
Query: 225 -EGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQ 283
+G + P P Q + P P+ PP +G+ RS+ PG+
Sbjct: 123 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP---PQGDNKSRSSRSPPGK 179
Query: 284 PPSAGRARDGGDGREAAVAGEGPSPRSPE 312
P G GG+ + G P P P+
Sbjct: 180 P--QGPPPQGGNQPQ----GPPPPPGKPQ 202
>gi|139394646 iroquois homeobox protein 5 [Homo sapiens]
Length = 483
Score = 46.6 bits (109), Expect = 4e-05
Identities = 51/190 (26%), Positives = 65/190 (34%), Gaps = 37/190 (19%)
Query: 130 RARDPESPAGPGAEGTTGGGSFSQQPSRRGLE--QGSPQNGAPRPMRFPRTVAVYSPLAL 187
R + P +PAG EG+ F + PS L+ QG P+ G P P P
Sbjct: 231 RLQGPPTPAGKETEGSLSDSDFKEPPSEGRLDALQGPPRTGGPSPAGPAAARLAEDPAPH 290
Query: 188 RRLTAFLEGPGPAAGEQRSGAS------DGERGPPPARLQGPEEGEVWTKKAPRRPQSDD 241
A GP PAAGE G PPPA L P ++W
Sbjct: 291 YPAGAPAPGPHPAAGEVPPGPGGPSVIHSPPPPPPPAVLAKP---KLW------------ 335
Query: 242 DGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAV 301
+ A + S ++ DG EG P P P AG+A G A
Sbjct: 336 ---SLAEIATSSDKVKDG-----GGGNEGSPCP------PCPGPIAGQALGGSRASPAPA 381
Query: 302 AGEGPSPRSP 311
PS + P
Sbjct: 382 PSRSPSAQCP 391
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 46.6 bits (109), Expect = 4e-05
Identities = 44/182 (24%), Positives = 62/182 (34%), Gaps = 24/182 (13%)
Query: 132 RDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLT 191
R P P P GG P R G +G P G + P
Sbjct: 49 RTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP--------------- 93
Query: 192 AFLEGPGPAAGEQRSGASDGERGPP-PARLQG-PEEGEVWTKKAPRRPQSDDDGEAQAAV 249
PG G+ G + + PP P + +G P +G ++ P RP + Q
Sbjct: 94 ---PRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGN 150
Query: 250 RASWEQPADG-PE-LPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPS 307
++ P G PE PP+ + + P + G PP G G R EGP
Sbjct: 151 QSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPG--KPEGPP 208
Query: 308 PR 309
P+
Sbjct: 209 PQ 210
Score = 35.8 bits (81), Expect = 0.076
Identities = 38/158 (24%), Positives = 47/158 (29%), Gaps = 17/158 (10%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAF 193
P P P GG P G +G P G + P P
Sbjct: 156 PPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPG--KP--------- 204
Query: 194 LEGPGPAAGEQRSGASD--GERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRA 251
EGP P G Q G G+ PP++ +G P +PQ E R
Sbjct: 205 -EGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGP---PPHPGKPQGPPPQEGNKPQRP 260
Query: 252 SWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGR 289
GP P Q+ P + P PP GR
Sbjct: 261 PPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGR 298
Score = 33.9 bits (76), Expect = 0.29
Identities = 29/112 (25%), Positives = 39/112 (34%), Gaps = 19/112 (16%)
Query: 198 GPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPA 257
G G + G + +R PPP G EG R PQ + + E P
Sbjct: 34 GKPEGRRPQGGNQPQRTPPPP---GKPEG--------RPPQGGNQSQGPPPRPGKPEGP- 81
Query: 258 DGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPR 309
PP+ + + P + GQPP G G R EGP P+
Sbjct: 82 -----PPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPG--KPEGPPPQ 126
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 46.2 bits (108), Expect = 6e-05
Identities = 56/212 (26%), Positives = 73/212 (34%), Gaps = 32/212 (15%)
Query: 122 LGRRTLQRRARDPES--------PAGPGAEGTTGGGSFSQQPSRRGLEQGS---PQNGAP 170
LGR+T Q+ A P P PG G Q+P +G + S P G+P
Sbjct: 444 LGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSP 503
Query: 171 RPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRS--------GASDGER---GPPPAR 219
P R P SP + + A P P G+ R GA R P P R
Sbjct: 504 LPQRLP------SPTSAPQQPASQAAP-PTQGQGRQSRPVAGGPGAPPAARPPASPSPQR 556
Query: 220 LQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALR 279
GP + T + P R Q GP P R+A + PR+
Sbjct: 557 QAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPP 616
Query: 280 SPGQPPSAGRARDGGDGREAAVAGEGPSPRSP 311
+ QP +G G GR + PS P
Sbjct: 617 TTQQPRPSG---PGPAGRPKPQLAQKPSQDVP 645
Score = 29.3 bits (64), Expect = 7.1
Identities = 55/215 (25%), Positives = 72/215 (33%), Gaps = 56/215 (26%)
Query: 5 GDEVLDGYVFPACPPCSYRYPYPAATKGKGAAGGSWQQRGRGCLPASSPCSAGAASLSFP 64
G + L G PA P R P P + + A+ + +G+G S P + G P
Sbjct: 489 GQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQG--RQSRPVAGG------P 540
Query: 65 GCGRLTAAEYFDSYQRERLMALLAQVGPGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGR 124
G S QR Q GP P+A R S V+ P+ A G
Sbjct: 541 GAPPAARPPASPSPQR--------QAGP---PQATRQTS--VSGPAPPKASGAPP---GG 584
Query: 125 RTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSP 184
+ Q + P PAGP + + G P R G P PRP
Sbjct: 585 QQRQGPPQKPPGPAGPTRQASQAG------PVPR---TGPPTTQQPRP------------ 623
Query: 185 LALRRLTAFLEGPGPAAGEQRSGASDGERG-PPPA 218
GPGPA + A + PPPA
Sbjct: 624 ----------SGPGPAGRPKPQLAQKPSQDVPPPA 648
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 46.2 bits (108), Expect = 6e-05
Identities = 56/212 (26%), Positives = 73/212 (34%), Gaps = 32/212 (15%)
Query: 122 LGRRTLQRRARDPES--------PAGPGAEGTTGGGSFSQQPSRRGLEQGS---PQNGAP 170
LGR+T Q+ A P P PG G Q+P +G + S P G+P
Sbjct: 444 LGRQTSQQPAGPPAQQRPPPQGGPPQPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAGSP 503
Query: 171 RPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRS--------GASDGER---GPPPAR 219
P R P SP + + A P P G+ R GA R P P R
Sbjct: 504 LPQRLP------SPTSAPQQPASQAAP-PTQGQGRQSRPVAGGPGAPPAARPPASPSPQR 556
Query: 220 LQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALR 279
GP + T + P R Q GP P R+A + PR+
Sbjct: 557 QAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPP 616
Query: 280 SPGQPPSAGRARDGGDGREAAVAGEGPSPRSP 311
+ QP +G G GR + PS P
Sbjct: 617 TTQQPRPSG---PGPAGRPKPQLAQKPSQDVP 645
Score = 30.8 bits (68), Expect = 2.4
Identities = 58/236 (24%), Positives = 78/236 (33%), Gaps = 58/236 (24%)
Query: 5 GDEVLDGYVFPACPPCSYRYPYPAATKGKGAAGGSWQQRGRGCLPASSPCSAGAASLSFP 64
G + L G PA P R P P + + A+ + +G+G S P + G P
Sbjct: 489 GQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQG--RQSRPVAGG------P 540
Query: 65 GCGRLTAAEYFDSYQRERLMALLAQVGPGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGR 124
G S QR Q GP P+A R S V+ P+ A G
Sbjct: 541 GAPPAARPPASPSPQR--------QAGP---PQATRQTS--VSGPAPPKASGAPP---GG 584
Query: 125 RTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSP 184
+ Q + P PAGP + + G P R G P PRP
Sbjct: 585 QQRQGPPQKPPGPAGPTRQASQAG------PVPR---TGPPTTQQPRP------------ 623
Query: 185 LALRRLTAFLEGPGPAAGEQRSGASDGERGPPP---ARLQGPEEGEVWTKKAPRRP 237
GPGPA + A + PP A GP ++ A +P
Sbjct: 624 ----------SGPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPHPQLKASPAQAQP 669
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 45.8 bits (107), Expect = 7e-05
Identities = 56/200 (28%), Positives = 78/200 (39%), Gaps = 20/200 (10%)
Query: 115 DAAVQCSLGRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMR 174
D+A S G +TL A P +P+G G + G R G ++G+P + + P
Sbjct: 467 DSAAVASGGAQTLAL-AGSP-APSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSETPGP 524
Query: 175 FPRTVAVYSPLALRRLTAFLEGPGPA--AGEQRSGASDGERGPPPARLQGPEEGEVWTKK 232
P A P T GP PA AG++ + + GP PA G E
Sbjct: 525 SPAGPAGDEPAESPSET---PGPRPAGPAGDEPAESPSETPGPRPAGPAGDE-------- 573
Query: 233 APRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARD 292
P S+ G + A + ++PA+ P P G A A SP + P A
Sbjct: 574 -PAESPSETPGPSPAG--PTRDEPAESPSETPGPRPAGPAGDEPA-ESPSETPGPRPAGP 629
Query: 293 GGD-GREAAVAGEGPSPRSP 311
GD E+ GPSP P
Sbjct: 630 AGDEPAESPSETPGPSPAGP 649
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 45.8 bits (107), Expect = 7e-05
Identities = 46/164 (28%), Positives = 62/164 (37%), Gaps = 33/164 (20%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAF 193
P P GP +G G+ Q P G QG P G R PR SP
Sbjct: 54 PGKPQGPPPQG----GNKPQGPPPPGKPQGPPPQG--DKSRSPR-----SP------PGK 96
Query: 194 LEGPGPAAGEQR----SGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAV 249
+GP P G+ + G + + PPP + QGP ++ R P G Q
Sbjct: 97 PQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQ--- 153
Query: 250 RASWEQPADGPELPPREA----QEGEAAPRSALRSPGQPPSAGR 289
Q + P+ PP A Q+ +A P + P +PP GR
Sbjct: 154 -----QEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGR 192
Score = 39.3 bits (90), Expect = 0.007
Identities = 30/117 (25%), Positives = 41/117 (35%), Gaps = 9/117 (7%)
Query: 195 EGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWE 254
+GP P G + G PPP + QGP + P P Q S
Sbjct: 37 QGPSPQGGNKPQGPP-----PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPR 91
Query: 255 QPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPRSP 311
P P+ PP + + + P P PP G+ + G A + S RSP
Sbjct: 92 SPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQ----GPPAQGGSKSQSARSP 144
Score = 38.9 bits (89), Expect = 0.009
Identities = 40/159 (25%), Positives = 51/159 (32%), Gaps = 42/159 (26%)
Query: 134 PESPAGPGAEGTTGG------GSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLAL 187
P P GP +G G P + G QG P G +P P
Sbjct: 74 PGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPP---------- 123
Query: 188 RRLTAFLEGPGPAAGEQRSGASDGERG-PPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQ 246
PG G G S + PP + QGP + E + P P + + Q
Sbjct: 124 ---------PGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQ 174
Query: 247 AAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPP 285
A PA P+ PPR Q G P +PP
Sbjct: 175 A-------PPAGQPQGPPRPPQGGR---------PSRPP 197
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 45.4 bits (106), Expect = 1e-04
Identities = 47/160 (29%), Positives = 60/160 (37%), Gaps = 37/160 (23%)
Query: 91 GPGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPA--------GPGA 142
GPGL PR + +G P D+A Q RR RR R A G A
Sbjct: 145 GPGLPPRGKASG---------PARDSAQQ----RRRPTRRPRGTRGGARRPGVRGQGAAA 191
Query: 143 EGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAG 202
G TG PSRR +P G RP+R P + + ++P P P AG
Sbjct: 192 VGPTGPRPTGAPPSRR-----TPPPGPRRPLRSPHSGSGWTPA---------RPPSPPAG 237
Query: 203 --EQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSD 240
E + R P P L G W ++P QS+
Sbjct: 238 APEALRPPASTTRAPAPLTLSFSARGLAWAGESPASHQSE 277
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 45.4 bits (106), Expect = 1e-04
Identities = 47/160 (29%), Positives = 60/160 (37%), Gaps = 37/160 (23%)
Query: 91 GPGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPA--------GPGA 142
GPGL PR + +G P D+A Q RR RR R A G A
Sbjct: 145 GPGLPPRGKASG---------PARDSAQQ----RRRPTRRPRGTRGGARRPGVRGQGAAA 191
Query: 143 EGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAG 202
G TG PSRR +P G RP+R P + + ++P P P AG
Sbjct: 192 VGPTGPRPTGAPPSRR-----TPPPGPRRPLRSPHSGSGWTPA---------RPPSPPAG 237
Query: 203 --EQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSD 240
E + R P P L G W ++P QS+
Sbjct: 238 APEALRPPASTTRAPAPLTLSFSARGLAWAGESPASHQSE 277
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 45.4 bits (106), Expect = 1e-04
Identities = 47/160 (29%), Positives = 60/160 (37%), Gaps = 37/160 (23%)
Query: 91 GPGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPA--------GPGA 142
GPGL PR + +G P D+A Q RR RR R A G A
Sbjct: 145 GPGLPPRGKASG---------PARDSAQQ----RRRPTRRPRGTRGGARRPGVRGQGAAA 191
Query: 143 EGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAG 202
G TG PSRR +P G RP+R P + + ++P P P AG
Sbjct: 192 VGPTGPRPTGAPPSRR-----TPPPGPRRPLRSPHSGSGWTPA---------RPPSPPAG 237
Query: 203 --EQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSD 240
E + R P P L G W ++P QS+
Sbjct: 238 APEALRPPASTTRAPAPLTLSFSARGLAWAGESPASHQSE 277
>gi|98985810 alpha 1 type XI collagen isoform B preproprotein [Homo
sapiens]
Length = 1818
Score = 44.3 bits (103), Expect = 2e-04
Identities = 55/185 (29%), Positives = 68/185 (36%), Gaps = 20/185 (10%)
Query: 134 PESPAGPGAEGTTGG-GSFSQQPSRRGLEQG-----SPQNGAPRPMRFPRTVAVYSPLAL 187
P P PGA+G G G+ P R G + S Q + + +A+ P
Sbjct: 486 PGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGP 545
Query: 188 RRLTAFLEGPGPAAGEQRSGASDGERGPP----PARLQGPEEGEVWTKKAPRRPQSDDDG 243
LT PGP G SGA GE G P P +QGP G RP +D
Sbjct: 546 MGLTG---RPGPVGGPGSSGAK-GESGDPGPQGPRGVQGP-PGPTGKPGKRGRPGADGGR 600
Query: 244 EAQAAVRASWEQPADG-PELPPREAQEGEAAPRSALRSPGQPPSAG-RARDGGDGREAAV 301
A ++ DG P LP + GE P+ PG P G R DG G
Sbjct: 601 GMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQG---PPGPPGDDGMRGEDGEIGPRGLP 657
Query: 302 AGEGP 306
GP
Sbjct: 658 GEAGP 662
Score = 42.0 bits (97), Expect = 0.001
Identities = 53/197 (26%), Positives = 66/197 (33%), Gaps = 21/197 (10%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLE--QGSPQNGAPRPMRFPRTVAVYSPLALRRLT 191
P P PG +G G F P G + +G PR R P P R
Sbjct: 852 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPT-----GPRGSRG-- 904
Query: 192 AFLEGPGPAAGEQRSGASDGERGPPPAR-LQGPE--EGEVWTKKAPRRPQSD-----DDG 243
GP G + + DG GPP R QGP+ G K P P D
Sbjct: 905 --ARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQ 962
Query: 244 EAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQP-PSAGRARDGGDGREAAVA 302
+ + P G + P + GE P PG P P + G G+E A
Sbjct: 963 RGETGFQGKTGPPGPGGVVGP-QGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKG 1021
Query: 303 GEGPSPRSPELGKERLR 319
GP S + G LR
Sbjct: 1022 DPGPQGISGKDGPAGLR 1038
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/191 (26%), Positives = 67/191 (35%), Gaps = 44/191 (23%)
Query: 137 PAGP-GAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLE 195
PAGP G+ G G +P ++G + +NG P P + P+ +
Sbjct: 1127 PAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP------PGLQGPVGAPGIAGGDG 1180
Query: 196 GPGPAA-----GEQRSGASDGERGPP-PARLQG--------PEEGEVWT-----KKAPRR 236
PGP G++ + G GPP P LQG E G+V PR
Sbjct: 1181 EPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRG 1240
Query: 237 PQSDDDGEAQAAVRASWEQPADGPELPPREAQE----GEAAPRSALRSPGQPPSAGRARD 292
PQ + ADGP+ PP GE +PG P AG
Sbjct: 1241 PQGPNG--------------ADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGP 1286
Query: 293 GGDGREAAVAG 303
G+ E AG
Sbjct: 1287 KGERGEKGEAG 1297
Score = 38.5 bits (88), Expect = 0.012
Identities = 61/224 (27%), Positives = 81/224 (36%), Gaps = 41/224 (18%)
Query: 92 PGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRR--TLQRRARDPESPAG-PGAEGTTGG 148
PG G+ VA + PR G+R T R +R P G PG +GT+GG
Sbjct: 870 PGFPGANGEKGARGVAGKPGPR---------GQRGPTGPRGSRGARGPTGKPGPKGTSGG 920
Query: 149 GSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGA 208
P RG PQ G P+ FP P L PG G++
Sbjct: 921 DGPPGPPGERG-----PQ-GPQGPVGFPGPKGPPGPPGKDGL------PG-HPGQRGETG 967
Query: 209 SDGERGPP-PARLQGP-----EEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPEL 262
G+ GPP P + GP E G + + P P + Q A+ ++ A G
Sbjct: 968 FQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGE---QGLPGAAGKEGAKGD-- 1022
Query: 263 PPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGP 306
P + G+ P PG+ R G G GEGP
Sbjct: 1023 PGPQGISGKDGPAGLRGFPGE-----RGLPGAQGAPGLKGGEGP 1061
Score = 37.4 bits (85), Expect = 0.026
Identities = 46/186 (24%), Positives = 58/186 (31%), Gaps = 18/186 (9%)
Query: 137 PAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEG 196
P PG +G G P G NGA P P +V + +
Sbjct: 1215 PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN 1274
Query: 197 PGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSD----DDGEAQAAVRAS 252
PGP GE G GERG E+GE A P + DDG
Sbjct: 1275 PGPP-GEAGVGGPKGERG---------EKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVG 1324
Query: 253 WEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGG----DGREAAVAGEGPSP 308
+ P P Q+G + PGQP G + + G G+ G
Sbjct: 1325 FPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEG 1384
Query: 309 RSPELG 314
R E G
Sbjct: 1385 RQGEKG 1390
Score = 35.8 bits (81), Expect = 0.076
Identities = 55/217 (25%), Positives = 70/217 (32%), Gaps = 40/217 (18%)
Query: 134 PESPAGP-------GAEGTTGGGSFSQQPSRRGLEQGSPQNGAP---RPMRFPRTVAVYS 183
P+ P GP G+ GT G +P +G + + GAP P V
Sbjct: 1061 PQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQG 1120
Query: 184 PLALRRLTAFLEGPGP--------AAGEQRSGASDGERGPP-PARLQGP--------EEG 226
P+ L PG G++ S GE GPP P LQGP +G
Sbjct: 1121 PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDG 1180
Query: 227 EVWTKKAPRRPQSDDDGEAQAAVRASWEQPA----DGPELPPRE-AQEGEAAPRSALRSP 281
E PR Q + R P G PP E + G+ P P
Sbjct: 1181 E----PGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPP 1236
Query: 282 G----QPPSAGRARDGGDGREAAVAGEGPSPRSPELG 314
G Q P+ G G +V G G E G
Sbjct: 1237 GPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAG 1273
Score = 32.3 bits (72), Expect = 0.84
Identities = 50/191 (26%), Positives = 64/191 (33%), Gaps = 43/191 (22%)
Query: 141 GAEGTTGGGSFSQQPSRRGLEQGSP-------QNGAPRPMRFPRTVAVYSPLALRRLTAF 193
G +G G F P GL QG P +NG PM P
Sbjct: 1192 GQKGDEGARGFPGPPGPIGL-QGLPGPPGEKGENGDVGPMGPP----------------- 1233
Query: 194 LEGPGPAAGEQRSGASDGERGPPPA--RLQG-PEEGEVWTKKAPRRP----------QSD 240
GP G Q +DG +GPP + + G E+GE P P +
Sbjct: 1234 --GPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERG 1291
Query: 241 DDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAA 300
+ GEA A+ A GP P + +G P PG P G A G G +
Sbjct: 1292 EKGEA-GPPGAAGPPGAKGP--PGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKG 1348
Query: 301 VAGEGPSPRSP 311
G+ P P
Sbjct: 1349 EDGDPGQPGPP 1359
>gi|98985808 alpha 1 type XI collagen isoform C preproprotein [Homo
sapiens]
Length = 1767
Score = 44.3 bits (103), Expect = 2e-04
Identities = 55/185 (29%), Positives = 68/185 (36%), Gaps = 20/185 (10%)
Query: 134 PESPAGPGAEGTTGG-GSFSQQPSRRGLEQG-----SPQNGAPRPMRFPRTVAVYSPLAL 187
P P PGA+G G G+ P R G + S Q + + +A+ P
Sbjct: 435 PGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGP 494
Query: 188 RRLTAFLEGPGPAAGEQRSGASDGERGPP----PARLQGPEEGEVWTKKAPRRPQSDDDG 243
LT PGP G SGA GE G P P +QGP G RP +D
Sbjct: 495 MGLTG---RPGPVGGPGSSGAK-GESGDPGPQGPRGVQGP-PGPTGKPGKRGRPGADGGR 549
Query: 244 EAQAAVRASWEQPADG-PELPPREAQEGEAAPRSALRSPGQPPSAG-RARDGGDGREAAV 301
A ++ DG P LP + GE P+ PG P G R DG G
Sbjct: 550 GMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQG---PPGPPGDDGMRGEDGEIGPRGLP 606
Query: 302 AGEGP 306
GP
Sbjct: 607 GEAGP 611
Score = 42.0 bits (97), Expect = 0.001
Identities = 53/197 (26%), Positives = 66/197 (33%), Gaps = 21/197 (10%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLE--QGSPQNGAPRPMRFPRTVAVYSPLALRRLT 191
P P PG +G G F P G + +G PR R P P R
Sbjct: 801 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPT-----GPRGSRG-- 853
Query: 192 AFLEGPGPAAGEQRSGASDGERGPPPAR-LQGPE--EGEVWTKKAPRRPQSD-----DDG 243
GP G + + DG GPP R QGP+ G K P P D
Sbjct: 854 --ARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQ 911
Query: 244 EAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQP-PSAGRARDGGDGREAAVA 302
+ + P G + P + GE P PG P P + G G+E A
Sbjct: 912 RGETGFQGKTGPPGPGGVVGP-QGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKG 970
Query: 303 GEGPSPRSPELGKERLR 319
GP S + G LR
Sbjct: 971 DPGPQGISGKDGPAGLR 987
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/191 (26%), Positives = 67/191 (35%), Gaps = 44/191 (23%)
Query: 137 PAGP-GAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLE 195
PAGP G+ G G +P ++G + +NG P P + P+ +
Sbjct: 1076 PAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP------PGLQGPVGAPGIAGGDG 1129
Query: 196 GPGPAA-----GEQRSGASDGERGPP-PARLQG--------PEEGEVWT-----KKAPRR 236
PGP G++ + G GPP P LQG E G+V PR
Sbjct: 1130 EPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRG 1189
Query: 237 PQSDDDGEAQAAVRASWEQPADGPELPPREAQE----GEAAPRSALRSPGQPPSAGRARD 292
PQ + ADGP+ PP GE +PG P AG
Sbjct: 1190 PQGPNG--------------ADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGP 1235
Query: 293 GGDGREAAVAG 303
G+ E AG
Sbjct: 1236 KGERGEKGEAG 1246
Score = 38.5 bits (88), Expect = 0.012
Identities = 61/224 (27%), Positives = 81/224 (36%), Gaps = 41/224 (18%)
Query: 92 PGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRR--TLQRRARDPESPAG-PGAEGTTGG 148
PG G+ VA + PR G+R T R +R P G PG +GT+GG
Sbjct: 819 PGFPGANGEKGARGVAGKPGPR---------GQRGPTGPRGSRGARGPTGKPGPKGTSGG 869
Query: 149 GSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGA 208
P RG PQ G P+ FP P L PG G++
Sbjct: 870 DGPPGPPGERG-----PQ-GPQGPVGFPGPKGPPGPPGKDGL------PG-HPGQRGETG 916
Query: 209 SDGERGPP-PARLQGP-----EEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPEL 262
G+ GPP P + GP E G + + P P + Q A+ ++ A G
Sbjct: 917 FQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGE---QGLPGAAGKEGAKGD-- 971
Query: 263 PPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGP 306
P + G+ P PG+ R G G GEGP
Sbjct: 972 PGPQGISGKDGPAGLRGFPGE-----RGLPGAQGAPGLKGGEGP 1010
Score = 37.4 bits (85), Expect = 0.026
Identities = 46/186 (24%), Positives = 58/186 (31%), Gaps = 18/186 (9%)
Query: 137 PAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEG 196
P PG +G G P G NGA P P +V + +
Sbjct: 1164 PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN 1223
Query: 197 PGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSD----DDGEAQAAVRAS 252
PGP GE G GERG E+GE A P + DDG
Sbjct: 1224 PGPP-GEAGVGGPKGERG---------EKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVG 1273
Query: 253 WEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGG----DGREAAVAGEGPSP 308
+ P P Q+G + PGQP G + + G G+ G
Sbjct: 1274 FPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEG 1333
Query: 309 RSPELG 314
R E G
Sbjct: 1334 RQGEKG 1339
Score = 35.8 bits (81), Expect = 0.076
Identities = 55/217 (25%), Positives = 70/217 (32%), Gaps = 40/217 (18%)
Query: 134 PESPAGP-------GAEGTTGGGSFSQQPSRRGLEQGSPQNGAP---RPMRFPRTVAVYS 183
P+ P GP G+ GT G +P +G + + GAP P V
Sbjct: 1010 PQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQG 1069
Query: 184 PLALRRLTAFLEGPGP--------AAGEQRSGASDGERGPP-PARLQGP--------EEG 226
P+ L PG G++ S GE GPP P LQGP +G
Sbjct: 1070 PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDG 1129
Query: 227 EVWTKKAPRRPQSDDDGEAQAAVRASWEQPA----DGPELPPRE-AQEGEAAPRSALRSP 281
E PR Q + R P G PP E + G+ P P
Sbjct: 1130 E----PGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPP 1185
Query: 282 G----QPPSAGRARDGGDGREAAVAGEGPSPRSPELG 314
G Q P+ G G +V G G E G
Sbjct: 1186 GPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAG 1222
Score = 32.3 bits (72), Expect = 0.84
Identities = 50/191 (26%), Positives = 64/191 (33%), Gaps = 43/191 (22%)
Query: 141 GAEGTTGGGSFSQQPSRRGLEQGSP-------QNGAPRPMRFPRTVAVYSPLALRRLTAF 193
G +G G F P GL QG P +NG PM P
Sbjct: 1141 GQKGDEGARGFPGPPGPIGL-QGLPGPPGEKGENGDVGPMGPP----------------- 1182
Query: 194 LEGPGPAAGEQRSGASDGERGPPPA--RLQG-PEEGEVWTKKAPRRP----------QSD 240
GP G Q +DG +GPP + + G E+GE P P +
Sbjct: 1183 --GPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERG 1240
Query: 241 DDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAA 300
+ GEA A+ A GP P + +G P PG P G A G G +
Sbjct: 1241 EKGEA-GPPGAAGPPGAKGP--PGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKG 1297
Query: 301 VAGEGPSPRSP 311
G+ P P
Sbjct: 1298 EDGDPGQPGPP 1308
>gi|98985806 alpha 1 type XI collagen isoform A preproprotein [Homo
sapiens]
Length = 1806
Score = 44.3 bits (103), Expect = 2e-04
Identities = 55/185 (29%), Positives = 68/185 (36%), Gaps = 20/185 (10%)
Query: 134 PESPAGPGAEGTTGG-GSFSQQPSRRGLEQG-----SPQNGAPRPMRFPRTVAVYSPLAL 187
P P PGA+G G G+ P R G + S Q + + +A+ P
Sbjct: 474 PGRPGLPGADGLPGPPGTMLMLPFRYGGDGSKGPTISAQEAQAQAILQQARIALRGPPGP 533
Query: 188 RRLTAFLEGPGPAAGEQRSGASDGERGPP----PARLQGPEEGEVWTKKAPRRPQSDDDG 243
LT PGP G SGA GE G P P +QGP G RP +D
Sbjct: 534 MGLTG---RPGPVGGPGSSGAK-GESGDPGPQGPRGVQGP-PGPTGKPGKRGRPGADGGR 588
Query: 244 EAQAAVRASWEQPADG-PELPPREAQEGEAAPRSALRSPGQPPSAG-RARDGGDGREAAV 301
A ++ DG P LP + GE P+ PG P G R DG G
Sbjct: 589 GMPGEPGAKGDRGFDGLPGLPGDKGHRGERGPQG---PPGPPGDDGMRGEDGEIGPRGLP 645
Query: 302 AGEGP 306
GP
Sbjct: 646 GEAGP 650
Score = 42.0 bits (97), Expect = 0.001
Identities = 53/197 (26%), Positives = 66/197 (33%), Gaps = 21/197 (10%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLE--QGSPQNGAPRPMRFPRTVAVYSPLALRRLT 191
P P PG +G G F P G + +G PR R P P R
Sbjct: 840 PGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVAGKPGPRGQRGPT-----GPRGSRG-- 892
Query: 192 AFLEGPGPAAGEQRSGASDGERGPPPAR-LQGPE--EGEVWTKKAPRRPQSD-----DDG 243
GP G + + DG GPP R QGP+ G K P P D
Sbjct: 893 --ARGPTGKPGPKGTSGGDGPPGPPGERGPQGPQGPVGFPGPKGPPGPPGKDGLPGHPGQ 950
Query: 244 EAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQP-PSAGRARDGGDGREAAVA 302
+ + P G + P + GE P PG P P + G G+E A
Sbjct: 951 RGETGFQGKTGPPGPGGVVGP-QGPTGETGPIGERGHPGPPGPPGEQGLPGAAGKEGAKG 1009
Query: 303 GEGPSPRSPELGKERLR 319
GP S + G LR
Sbjct: 1010 DPGPQGISGKDGPAGLR 1026
Score = 39.7 bits (91), Expect = 0.005
Identities = 50/191 (26%), Positives = 67/191 (35%), Gaps = 44/191 (23%)
Query: 137 PAGP-GAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLE 195
PAGP G+ G G +P ++G + +NG P P + P+ +
Sbjct: 1115 PAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGP------PGLQGPVGAPGIAGGDG 1168
Query: 196 GPGPAA-----GEQRSGASDGERGPP-PARLQG--------PEEGEVWT-----KKAPRR 236
PGP G++ + G GPP P LQG E G+V PR
Sbjct: 1169 EPGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPPGPRG 1228
Query: 237 PQSDDDGEAQAAVRASWEQPADGPELPPREAQE----GEAAPRSALRSPGQPPSAGRARD 292
PQ + ADGP+ PP GE +PG P AG
Sbjct: 1229 PQGPNG--------------ADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGP 1274
Query: 293 GGDGREAAVAG 303
G+ E AG
Sbjct: 1275 KGERGEKGEAG 1285
Score = 38.5 bits (88), Expect = 0.012
Identities = 61/224 (27%), Positives = 81/224 (36%), Gaps = 41/224 (18%)
Query: 92 PGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRR--TLQRRARDPESPAG-PGAEGTTGG 148
PG G+ VA + PR G+R T R +R P G PG +GT+GG
Sbjct: 858 PGFPGANGEKGARGVAGKPGPR---------GQRGPTGPRGSRGARGPTGKPGPKGTSGG 908
Query: 149 GSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGA 208
P RG PQ G P+ FP P L PG G++
Sbjct: 909 DGPPGPPGERG-----PQ-GPQGPVGFPGPKGPPGPPGKDGL------PG-HPGQRGETG 955
Query: 209 SDGERGPP-PARLQGP-----EEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPEL 262
G+ GPP P + GP E G + + P P + Q A+ ++ A G
Sbjct: 956 FQGKTGPPGPGGVVGPQGPTGETGPIGERGHPGPPGPPGE---QGLPGAAGKEGAKGD-- 1010
Query: 263 PPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGP 306
P + G+ P PG+ R G G GEGP
Sbjct: 1011 PGPQGISGKDGPAGLRGFPGE-----RGLPGAQGAPGLKGGEGP 1049
Score = 37.4 bits (85), Expect = 0.026
Identities = 46/186 (24%), Positives = 58/186 (31%), Gaps = 18/186 (9%)
Query: 137 PAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEG 196
P PG +G G P G NGA P P +V + +
Sbjct: 1203 PGPPGEKGENGDVGPMGPPGPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGN 1262
Query: 197 PGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSD----DDGEAQAAVRAS 252
PGP GE G GERG E+GE A P + DDG
Sbjct: 1263 PGPP-GEAGVGGPKGERG---------EKGEAGPPGAAGPPGAKGPPGDDGPKGNPGPVG 1312
Query: 253 WEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGG----DGREAAVAGEGPSP 308
+ P P Q+G + PGQP G + + G G+ G
Sbjct: 1313 FPGDPGPPGEPGPAGQDGVGGDKGEDGDPGQPGPPGPSGEAGPPGPPGKRGPPGAAGAEG 1372
Query: 309 RSPELG 314
R E G
Sbjct: 1373 RQGEKG 1378
Score = 35.8 bits (81), Expect = 0.076
Identities = 55/217 (25%), Positives = 70/217 (32%), Gaps = 40/217 (18%)
Query: 134 PESPAGP-------GAEGTTGGGSFSQQPSRRGLEQGSPQNGAP---RPMRFPRTVAVYS 183
P+ P GP G+ GT G +P +G + + GAP P V
Sbjct: 1049 PQGPPGPVGSPGERGSAGTAGPIGLPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGVQG 1108
Query: 184 PLALRRLTAFLEGPGP--------AAGEQRSGASDGERGPP-PARLQGP--------EEG 226
P+ L PG G++ S GE GPP P LQGP +G
Sbjct: 1109 PVGLPGPAGPAGSPGEDGDKGEIGEPGQKGSKGDKGENGPPGPPGLQGPVGAPGIAGGDG 1168
Query: 227 EVWTKKAPRRPQSDDDGEAQAAVRASWEQPA----DGPELPPRE-AQEGEAAPRSALRSP 281
E PR Q + R P G PP E + G+ P P
Sbjct: 1169 E----PGPRGQQGMFGQKGDEGARGFPGPPGPIGLQGLPGPPGEKGENGDVGPMGPPGPP 1224
Query: 282 G----QPPSAGRARDGGDGREAAVAGEGPSPRSPELG 314
G Q P+ G G +V G G E G
Sbjct: 1225 GPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAG 1261
Score = 32.3 bits (72), Expect = 0.84
Identities = 50/191 (26%), Positives = 64/191 (33%), Gaps = 43/191 (22%)
Query: 141 GAEGTTGGGSFSQQPSRRGLEQGSP-------QNGAPRPMRFPRTVAVYSPLALRRLTAF 193
G +G G F P GL QG P +NG PM P
Sbjct: 1180 GQKGDEGARGFPGPPGPIGL-QGLPGPPGEKGENGDVGPMGPP----------------- 1221
Query: 194 LEGPGPAAGEQRSGASDGERGPPPA--RLQG-PEEGEVWTKKAPRRP----------QSD 240
GP G Q +DG +GPP + + G E+GE P P +
Sbjct: 1222 --GPPGPRGPQGPNGADGPQGPPGSVGSVGGVGEKGEPGEAGNPGPPGEAGVGGPKGERG 1279
Query: 241 DDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAA 300
+ GEA A+ A GP P + +G P PG P G A G G +
Sbjct: 1280 EKGEA-GPPGAAGPPGAKGP--PGDDGPKGNPGPVGFPGDPGPPGEPGPAGQDGVGGDKG 1336
Query: 301 VAGEGPSPRSP 311
G+ P P
Sbjct: 1337 EDGDPGQPGPP 1347
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 44.3 bits (103), Expect = 2e-04
Identities = 46/191 (24%), Positives = 64/191 (33%), Gaps = 31/191 (16%)
Query: 141 GAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLAL------RRLTAFL 194
GA G G P +G++ G + G P P F P R L
Sbjct: 520 GAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEF 579
Query: 195 EGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWE 254
PGPA GERGPP G + ++ P D + V A
Sbjct: 580 GLPGPAGPR-------GERGPPGESGAAGPTGPIGSRGPSGPPGPDGNKGEPGVVGAVGT 632
Query: 255 QPADGPE----------LPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGE 304
GP +P + ++GE R + +PG RDG G AV
Sbjct: 633 AGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGNPG--------RDGARGAPGAVGAP 684
Query: 305 GPSPRSPELGK 315
GP+ + + G+
Sbjct: 685 GPAGATGDRGE 695
Score = 36.6 bits (83), Expect = 0.044
Identities = 56/203 (27%), Positives = 69/203 (33%), Gaps = 13/203 (6%)
Query: 123 GRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRT---- 178
G L P +P G G G Q RGL + GAP P +
Sbjct: 181 GHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSV 240
Query: 179 --VAVYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRR 236
V P+ F PGP GE + + G GP R + G P
Sbjct: 241 GPVGPAGPIGSAGPPGFPGAPGP-KGEIGAVGNAGPAGPAGPRGEVGLPGLSGPVGPPGN 299
Query: 237 PQSDDDGEAQAAVRASWEQPADGPELP-PR--EAQEGEAAPRSALRSPGQPPSAGRARDG 293
P + +G A A A P LP PR G A A G+P AG +
Sbjct: 300 PGA--NGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGES 357
Query: 294 GDGREAAVAG-EGPSPRSPELGK 315
G+ E AG +GP S E GK
Sbjct: 358 GNKGEPGSAGPQGPPGPSGEEGK 380
Score = 36.2 bits (82), Expect = 0.058
Identities = 51/180 (28%), Positives = 63/180 (35%), Gaps = 37/180 (20%)
Query: 134 PESPAG----PGAEGTTGGGSFSQQPSRRGLEQGSP----QNGAPRPMRFPRTVAVYSPL 185
P P+G GA G GG +P RG E G+P GAP + P
Sbjct: 635 PSGPSGLPGERGAAGIPGGKGEKGEPGLRG-EIGNPGRDGARGAPGAVGAP--------- 684
Query: 186 ALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEA 245
GP A G++ + G GP R E GEV P P + G A
Sbjct: 685 ----------GPAGATGDRGEAGAAGPAGPAGPRGSPGERGEV----GPAGP-NGFAGPA 729
Query: 246 QAAVR--ASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAG 303
AA + A E+ A GP+ G P A G G A GDG + G
Sbjct: 730 GAAGQPGAKGERGAKGPK--GENGVVGPTGPVGAAGPAGPNGPPGPAGSRGDGGPPGMTG 787
Score = 34.3 bits (77), Expect = 0.22
Identities = 45/196 (22%), Positives = 61/196 (31%), Gaps = 33/196 (16%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLE-----QGSPQNGAPR----PMRFPRTVAVYSP 184
P S G G G + +P GL GSP N P P+ P P
Sbjct: 420 PGSRGASGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGP 479
Query: 185 LALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGE 244
+ GP A GE + G +GP + ++G A P D +
Sbjct: 480 I----------GPAGARGEPGNIGFPGPKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNG 529
Query: 245 AQAAVRASWEQPADGPELPPR----EAQEGEAAPRSALRSPGQ----------PPSAGRA 290
AQ Q G + PP + G + P + PG+ P+ R
Sbjct: 530 AQGPPGPQGVQGGKGEQGPPGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRG 589
Query: 291 RDGGDGREAAVAGEGP 306
G G A GP
Sbjct: 590 ERGPPGESGAAGPTGP 605
Score = 33.9 bits (76), Expect = 0.29
Identities = 52/189 (27%), Positives = 62/189 (32%), Gaps = 21/189 (11%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGL--EQGSPQNGAPRPMRFPR----TVAVYSPLAL 187
P P G G +G +P RGL E G P PR R P P+
Sbjct: 549 PGPPGFQGLPGPSGPAGEVGKPGERGLHGEFGLPGPAGPRGERGPPGESGAAGPTGPIGS 608
Query: 188 RRLTAFLEGPGPAAGEQRSGASDGERGPP-PARLQGP-----------EEGEVWTKKAPR 235
R + GP GE + G GP P+ L G E+GE +
Sbjct: 609 RGPSG-PPGPDGNKGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIG 667
Query: 236 RPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGD 295
P D A AV A A G A G A P SPG+ G A G
Sbjct: 668 NPGRDGARGAPGAVGAPGPAGATGDRGEAGAA--GPAGPAGPRGSPGERGEVGPAGPNGF 725
Query: 296 GREAAVAGE 304
A AG+
Sbjct: 726 AGPAGAAGQ 734
Score = 33.5 bits (75), Expect = 0.38
Identities = 51/191 (26%), Positives = 63/191 (32%), Gaps = 21/191 (10%)
Query: 134 PESPAG-------PGAEGTTGGGSFSQQPSRRGLE--QGSPQNGAPRPMRFPRTVAVYSP 184
P PAG PG G G + P G+ G P +R PR P
Sbjct: 770 PPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGISGPPGPPGPAGKEGLRGPR--GDQGP 827
Query: 185 LALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGE 244
+ R GP AGE+ G GPP GP +G + P S +
Sbjct: 828 VG-RTGEVGAVGPPGFAGEKGPSGEAGTAGPPGT--PGP-QGLLGAPGILGLPGSRGERG 883
Query: 245 AQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRA-RDGGDGREAAVAG 303
A E G PP G P A+ SPG + G A RDG G +
Sbjct: 884 LPGVAGAVGEPGPLGIAGPP-----GARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPPGR 938
Query: 304 EGPSPRSPELG 314
+G E G
Sbjct: 939 DGQPGHKGERG 949
Score = 32.7 bits (73), Expect = 0.64
Identities = 47/179 (26%), Positives = 57/179 (31%), Gaps = 47/179 (26%)
Query: 134 PESPAGP-GAEGTTG-GGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLT 191
P P GP G G G GG+F+ Q +G+ G G P
Sbjct: 58 PTGPPGPPGPPGPPGLGGNFAAQYDGKGVGLGPGPMGLMGP------------------- 98
Query: 192 AFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRA 251
GP AAG P P QGP GE P P A+
Sbjct: 99 ---RGPPGAAG-----------APGPQGFQGP-AGE------PGEPGQTGPAGARGPAGP 137
Query: 252 SWEQPADG-PELPPREAQEGEAAPRSALRSPGQPPSAG----RARDGGDGREAAVAGEG 305
+ DG P P R + G P+ A PG P G R +G DG + G
Sbjct: 138 PGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPG 196
Score = 30.4 bits (67), Expect = 3.2
Identities = 58/211 (27%), Positives = 71/211 (33%), Gaps = 24/211 (11%)
Query: 123 GRRTLQRRARDPESPAGPGAEGTTGGGSFSQQPSRRGL--EQGSPQNGAPRPMRFPRTVA 180
G+R A P PG G+ G R G+ GS P +R P A
Sbjct: 379 GKRGPNGEAGSAGPPGPPGLRGSPGSRGLPGADGRAGVMGPPGSRGASGPAGVRGPNGDA 438
Query: 181 ----VYSPLALRRLTAFLEGPGPAAGEQRSG--ASDGERGP-PPARLQGPEEGEVWTKKA 233
+ R L GPA E G DG GP PA +G E G +
Sbjct: 439 GRPGEPGLMGPRGLPGSPGNIGPAGKEGPVGLPGIDGRPGPIGPAGARG-EPGNIGF-PG 496
Query: 234 PRRPQSD-----DDGEAQAAVRASWEQP-----ADGPELPPR-EAQEGEAAPRSALRSPG 282
P+ P D D G A A P A GP P + +GE P G
Sbjct: 497 PKGPTGDPGKNGDKGHAGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPPGPPGFQG 556
Query: 283 QPPSAGRARDGGDGREAAVAGEG--PSPRSP 311
P +G A + G E + GE P P P
Sbjct: 557 LPGPSGPAGEVGKPGERGLHGEFGLPGPAGP 587
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 44.3 bits (103), Expect = 2e-04
Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 27/147 (18%)
Query: 194 LEGPGPAAGEQRSGASDGERG-----------PPPARLQGPE-EGEVWTKKAPRRPQSDD 241
L+G A G+Q G SDG G P ++ PE EG+ + +P+S+D
Sbjct: 1814 LQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESED 1873
Query: 242 ------DGEAQ------AAVRASWE-QP-ADGPELPPREAQ-EGEAAPRSALRSPGQPPS 286
+GEAQ A WE QP ++G E P E + + E AL + G+
Sbjct: 1874 VEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEP 1933
Query: 287 AGRARDGGDGREAAVAGEGPSPRSPEL 313
+ + EAA EG + E+
Sbjct: 1934 ESEGAEAQEAEEAAQEAEGQTQPESEV 1960
Score = 42.7 bits (99), Expect = 6e-04
Identities = 54/194 (27%), Positives = 74/194 (38%), Gaps = 21/194 (10%)
Query: 131 ARDPESPAGPGAEGTTGGGSFSQ-QPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRR 189
A+D E A P +EG + + QP G+E + A P + + +P A
Sbjct: 2150 AQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQ-----PESEGIEAPEAEGE 2204
Query: 190 LTAFLEG-PGPAAGEQRSGASDGERGPPPARLQGPE-EGEVWTKKAPRRPQSDDDGEAQA 247
LEG P A E+ +G P PE EGE +K S DG+++
Sbjct: 2205 AQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQGEKKGSPQVSLGDGQSEE 2264
Query: 248 AVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQP--PSAGRARDGG-----DGREAA 300
A +S P D P PP G P + PG PS+ RA G D
Sbjct: 2265 ASESSSPVPEDRPTPPP---SPGGDTPH---QRPGSQTGPSSSRASSWGNCWQKDSENDH 2318
Query: 301 VAGEGPSPRSPELG 314
V G+ SP + G
Sbjct: 2319 VLGDTRSPDAKSTG 2332
Score = 34.3 bits (77), Expect = 0.22
Identities = 43/140 (30%), Positives = 57/140 (40%), Gaps = 24/140 (17%)
Query: 195 EGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDG-EAQAAVRASW 253
EG A E+ SDG P + + +E E T+K Q + DG EA A +
Sbjct: 2006 EGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQ 2065
Query: 254 E-----QPADG---PELPPREAQ--EGEAAPRS-----------ALRSPG--QPPSAGRA 290
E Q A+G PE +AQ EGEA P S A ++ G P + G A
Sbjct: 2066 EAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEA 2125
Query: 291 RDGGDGREAAVAGEGPSPRS 310
+ +G EA A P S
Sbjct: 2126 QPESEGIEAPEAEGEAQPES 2145
Score = 34.3 bits (77), Expect = 0.22
Identities = 33/114 (28%), Positives = 43/114 (37%), Gaps = 16/114 (14%)
Query: 209 SDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQ 268
SDG P EGEV + P+S+D +A A E ++G E P E +
Sbjct: 2052 SDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPE--SEGVEAPEAEGE 2109
Query: 269 ------------EGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPRS 310
EGEA P S P + G A+ +G EA A P S
Sbjct: 2110 AQKAEGIEAPETEGEAQPES--EGIEAPEAEGEAQPESEGVEAQDAEGEAQPES 2161
Score = 34.3 bits (77), Expect = 0.22
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 21/133 (15%)
Query: 199 PAAGEQRSGASDGERGPPPARLQGPE-EGEVWTKKAPRRPQSDDD--------------G 243
P + + + ++GE P ++ PE EGE + P+++ + G
Sbjct: 2080 PESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEG 2139
Query: 244 EAQAAVRASWEQPADGPELPPR---EAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAA 300
EAQ Q A+G P EAQE E + L P + G A+ +G EA
Sbjct: 2140 EAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIEAP 2199
Query: 301 VAGEGPSPRSPEL 313
E PEL
Sbjct: 2200 ---EAEGEAQPEL 2209
Score = 31.2 bits (69), Expect = 1.9
Identities = 52/226 (23%), Positives = 79/226 (34%), Gaps = 19/226 (8%)
Query: 92 PGL-GPRARRAGSCDV---AVQVSPRIDA---AVQCSLGRRTLQRRA---RDPESPAGPG 141
PG+ GPR R G +V Q P+ + + S G R R+ +G
Sbjct: 379 PGVWGPRPCRVGCREVFGRGGQPGPKYEIWTNPLHASQGERVAARKRWGLAQHVRCSGLW 438
Query: 142 AEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTV--AVYSPLALRRLTAFLEGPGP 199
GT G SQ + G P+ P PRT V S ++ A + G
Sbjct: 439 GHGTAGRERCSQDSASPASSTGLPEGSEPESSCCPRTPEDGVDSASPSAQIGAERKAGG- 497
Query: 200 AAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADG 259
+ GE DG A L GPE+G T +A + D A +
Sbjct: 498 SLGEDPGLCIDG------AGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGR 551
Query: 260 PELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEG 305
P+ P +A+ + ++ P+ + D +A G+G
Sbjct: 552 PQGCPGKARAETSQQEASEGGDPASPALSLSSLRSDDLQAETQGQG 597
Score = 28.9 bits (63), Expect = 9.2
Identities = 40/173 (23%), Positives = 59/173 (34%), Gaps = 24/173 (13%)
Query: 150 SFSQQPSRRGLEQGSPQNGAPRPMRFPR--------TVAVYSPLALRRLTAFLEGPGPAA 201
S PS GL + +P+ G PR + + +V P R A +G P
Sbjct: 646 SAMSSPSSPGLGRVAPR-GHPRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVP-- 702
Query: 202 GEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQP---AD 258
+ SG+S R L+ P G + P D G + A V +
Sbjct: 703 --RYSGSSSSTRTQASGNLRPPSSGSL--------PSQDLLGTSSATVTPAVHSDFVSGV 752
Query: 259 GPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPRSP 311
P P G+A R+ +P P ++ G A + P P SP
Sbjct: 753 SPHNAPSAGWAGDAGSRTCSPAPIPPHTSDSCSKSGAASLGEEARDTPQPSSP 805
>gi|239742799 PREDICTED: hypothetical protein XP_002342652 [Homo
sapiens]
Length = 647
Score = 43.9 bits (102), Expect = 3e-04
Identities = 80/322 (24%), Positives = 107/322 (33%), Gaps = 48/322 (14%)
Query: 25 PYPAATKGKGAAGGSWQQRGRGCLPASSPCSAGAASLSFPGCGRLTAAEYFDSYQRERLM 84
P + G+ A G +RG G A + ++ P G + A Y RL+
Sbjct: 213 PRAHSPAGRLALGLIAPRRGAGRAGAGAAACGRRGRIAAPLSGVVQKASYLRPKNLPRLL 272
Query: 85 ALLAQVGPGLGPRARRAGSCD--------VAVQVSPRIDAAVQCSLGRRTLQRRARDPES 136
++ + G R+G A + S A L R T + A
Sbjct: 273 SMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVGLARGTAPQPASTWAL 332
Query: 137 PAGPGAEGT---------------------TGGGSFSQQPSRRGLEQGSPQNGAPRPMRF 175
A P A GT G G+ + +P+R SP RP R
Sbjct: 333 AARPRAGGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEPAR----VWSPPPRRQRPRRL 388
Query: 176 PRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPR 235
PR P R A G GPA E + G PP AR G + +APR
Sbjct: 389 PRASLQEEP-KRRPPCARPSGAGPAR-EGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPR 446
Query: 236 RPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGD 295
+ A +A W+ G R A G RSA SP AR G
Sbjct: 447 GGPASSGWHAGSAAGRGWD--PGGGSRARRRAARGRGCLRSARSSP-------HARPLGS 497
Query: 296 GREA----AVAGEGPSPRSPEL 313
R + AG+GPS S E+
Sbjct: 498 SRSVRLLRSAAGKGPSLDSREV 519
Score = 38.5 bits (88), Expect = 0.012
Identities = 71/277 (25%), Positives = 99/277 (35%), Gaps = 47/277 (16%)
Query: 79 QRERLMALLAQVGPGL----GPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDP 134
+R R L Q+GP P A RA D + + + A + + L+ P
Sbjct: 154 RRRRAADTLFQLGPAWPALPAPAAGRALGTDEPLALRGQCGPAARRGCAQEQLRNAPWAP 213
Query: 135 E--SPAGPGA-------EGTTGGGSFSQQPSRRGLEQGSPQNGAP------RPMRFPRTV 179
SPAG A G G+ + RRG +P +G RP PR +
Sbjct: 214 RAHSPAGRLALGLIAPRRGAGRAGAGAAACGRRG-RIAAPLSGVVQKASYLRPKNLPRLL 272
Query: 180 AVYSPLALRRLTAFLEGPGPAA---GEQRSGASDGERGPPPARLQG-------------- 222
++ S A R A L G + G + A G RG PA G
Sbjct: 273 SMPSAAA-RPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVGLARGTAPQPASTWA 331
Query: 223 ----PEEGEVWTKK-APRRPQSDDDGEAQAAVRAS--WEQPADGPELPPREAQEGEAAPR 275
P G WT + +R + DG+ + A +PA PPR Q PR
Sbjct: 332 LAARPRAGGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRR-QRPRRLPR 390
Query: 276 SALR-SPGQPPSAGRARDGGDGREAAVAGEGPSPRSP 311
++L+ P + P R G RE A G +P P
Sbjct: 391 ASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPP 427
>gi|239748756 PREDICTED: hypothetical protein XP_002346788 [Homo
sapiens]
Length = 647
Score = 43.5 bits (101), Expect = 4e-04
Identities = 80/322 (24%), Positives = 106/322 (32%), Gaps = 48/322 (14%)
Query: 25 PYPAATKGKGAAGGSWQQRGRGCLPASSPCSAGAASLSFPGCGRLTAAEYFDSYQRERLM 84
P + G+ A G +RG G A + ++ P G + A Y RL+
Sbjct: 213 PRAHSPAGRLALGLIAPRRGAGRAGAGAAACGRRGRIAAPLSGVVQKASYLRPKNLPRLL 272
Query: 85 ALLAQVGPGLGPRARRAGSCD--------VAVQVSPRIDAAVQCSLGRRTLQRRARDPES 136
++ + G R+G A + S A L R T + A
Sbjct: 273 SMPSAAARPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVGLARGTAPQPASTWAL 332
Query: 137 PAGPGAEGT---------------------TGGGSFSQQPSRRGLEQGSPQNGAPRPMRF 175
A P A GT G G+ + +P+R SP RP R
Sbjct: 333 AARPRAGGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEPAR----VWSPPPRRQRPRRL 388
Query: 176 PRTVAVYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPR 235
PR P R A G GPA E + G PP AR G + +APR
Sbjct: 389 PRASLQEEP-KRRPPCARPSGAGPAR-EGPAAWPGGAPTPPHARPTGRRQDPEPGPRAPR 446
Query: 236 RPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGD 295
+ A +A W+ G R A G RSA SP AR G
Sbjct: 447 GGPASSGWHAGSAAGRGWD--PGGGSRARRRAARGRGCLRSARSSP-------HARPLGS 497
Query: 296 GREA----AVAGEGPSPRSPEL 313
R + AG GPS S E+
Sbjct: 498 SRSVRLLRSAAGRGPSLDSREV 519
Score = 38.5 bits (88), Expect = 0.012
Identities = 71/277 (25%), Positives = 99/277 (35%), Gaps = 47/277 (16%)
Query: 79 QRERLMALLAQVGPGL----GPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDP 134
+R R L Q+GP P A RA D + + + A + + L+ P
Sbjct: 154 RRRRAADTLFQLGPAWPALPAPAAGRALGTDEPLALRGQCGPAARRGCAQEQLRNAPWAP 213
Query: 135 E--SPAGPGA-------EGTTGGGSFSQQPSRRGLEQGSPQNGAP------RPMRFPRTV 179
SPAG A G G+ + RRG +P +G RP PR +
Sbjct: 214 RAHSPAGRLALGLIAPRRGAGRAGAGAAACGRRG-RIAAPLSGVVQKASYLRPKNLPRLL 272
Query: 180 AVYSPLALRRLTAFLEGPGPAA---GEQRSGASDGERGPPPARLQG-------------- 222
++ S A R A L G + G + A G RG PA G
Sbjct: 273 SMPSAAA-RPCGAALPRSGFSGRPRGRGGAAAGRGSRGEHPACGVGLARGTAPQPASTWA 331
Query: 223 ----PEEGEVWTKK-APRRPQSDDDGEAQAAVRAS--WEQPADGPELPPREAQEGEAAPR 275
P G WT + +R + DG+ + A +PA PPR Q PR
Sbjct: 332 LAARPRAGGTWTSRFEAQRGCAHQDGQRRTRDGAGNHASEPARVWSPPPRR-QRPRRLPR 390
Query: 276 SALR-SPGQPPSAGRARDGGDGREAAVAGEGPSPRSP 311
++L+ P + P R G RE A G +P P
Sbjct: 391 ASLQEEPKRRPPCARPSGAGPAREGPAAWPGGAPTPP 427
>gi|89276751 alpha 1 type V collagen preproprotein [Homo sapiens]
Length = 1838
Score = 43.1 bits (100), Expect = 5e-04
Identities = 52/196 (26%), Positives = 65/196 (33%), Gaps = 19/196 (9%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLE--QGSPQNGAPRPMRFPRTVAVYSPLALRRLT 191
P P PG +G G F P G + +G+P PR R P P R
Sbjct: 870 PGLPGYPGRQGPKGSIGFPGFPGANGEKGGRGTPGKPGPRGQRGPT-----GPRGERGPR 924
Query: 192 AFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVW--TKKAPRRPQSDDDGEAQAAV 249
PGP + + DG GPP R +G K P P D
Sbjct: 925 GITGKPGP----KGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDGLPGHPGQ 980
Query: 250 RA-SWEQPADGPELPP----REAQEGEAAPRSALRSPGQP-PSAGRARDGGDGREAAVAG 303
R + Q GP PP + GE P PG P P + G G+E
Sbjct: 981 RGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAGKEGTKGD 1040
Query: 304 EGPSPRSPELGKERLR 319
GP+ + G LR
Sbjct: 1041 PGPAGLPGKDGPPGLR 1056
Score = 38.1 bits (87), Expect = 0.015
Identities = 48/176 (27%), Positives = 59/176 (33%), Gaps = 52/176 (29%)
Query: 134 PESPAGP-GAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTA 192
P P GP G G G +P RG + Q G P FP P+ L+ L
Sbjct: 1178 PPGPTGPQGPIGQPGPSGADGEPGPRGQQGLFGQKGDEGPRGFPGPPG---PVGLQGL-- 1232
Query: 193 FLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRAS 252
PGP GE+ G+ GPP GP PR P S
Sbjct: 1233 ----PGPP-GEKGETGDVGQMGPP-----GPP--------GPRGP--------------S 1260
Query: 253 WEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSP 308
ADGP+ PP G P + G + G+ E + GEG P
Sbjct: 1261 GAPGADGPQGPPGGI--------------GNPGAVGEKGEPGEAGEPGLPGEGGPP 1302
Score = 37.0 bits (84), Expect = 0.034
Identities = 47/181 (25%), Positives = 60/181 (33%), Gaps = 17/181 (9%)
Query: 137 PAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEG 196
P PG +G TG P G S GA P P + +P A+ G
Sbjct: 1233 PGPPGEKGETGDVGQMGPPGPPGPRGPSGAPGADGPQGPPGGIG--NPGAV--------G 1282
Query: 197 PGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKA-----PRRPQSDDDGEAQAAVRA 251
GE GE GPP + + E+GE A P+ P DDG +
Sbjct: 1283 EKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAAGPPGPKGPPG-DDGPKGSPGPV 1341
Query: 252 SWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPRSP 311
+ P P Q+G + PGQ S G + G G P P P
Sbjct: 1342 GFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPPGKRGP-PGPAGP 1400
Query: 312 E 312
E
Sbjct: 1401 E 1401
Score = 37.0 bits (84), Expect = 0.034
Identities = 48/188 (25%), Positives = 68/188 (36%), Gaps = 22/188 (11%)
Query: 137 PAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEG 196
P PG G G P +G + Q G+P P P P R
Sbjct: 1344 PGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPTGEP---GPSGPPGKR------GP 1394
Query: 197 PGPAAGEQRSGASDGERGPPPARLQGP--EEGEVWTKKAPRRPQSDDDGEAQAAVRASWE 254
PGPA E R G G +G A L+GP + G + + AP +P D V
Sbjct: 1395 PGPAGPEGRQG-EKGAKG--EAGLEGPPGKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGL 1451
Query: 255 QPADGPELPP-------REAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAG-EGP 306
+ GP+ PP +G++ P+ PG G + G+ + + G +G
Sbjct: 1452 PGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEKGDRGLPGPQGS 1511
Query: 307 SPRSPELG 314
S E G
Sbjct: 1512 SGPKGEQG 1519
Score = 33.5 bits (75), Expect = 0.38
Identities = 57/222 (25%), Positives = 69/222 (31%), Gaps = 62/222 (27%)
Query: 132 RDPESPAG----PGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLAL 187
R P P G PG G G G +P G PQ PR ++ P
Sbjct: 558 RGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVG-----PQG--PRGVQGP----------- 599
Query: 188 RRLTAFLEGPGPAAGEQRSG--ASDGERGPPP-------------ARLQGPE--EGEVWT 230
PGPA R G SDG RG P A L G + G+
Sbjct: 600 ---------PGPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGP 650
Query: 231 KKAPRRPQSD----DDGEAQAAVRASWEQPAD--GPELPPR-------EAQEGEAAPRSA 277
P P D DDGE P GP+ PP +G+ P+
Sbjct: 651 SGPPGPPGDDGERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGN 710
Query: 278 LRSPGQP-PSAGRARDGGDGREAAVAGEGPSPRSPELGKERL 318
+ G+P P + G G GP LGK L
Sbjct: 711 VGPQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGL 752
Score = 33.5 bits (75), Expect = 0.38
Identities = 44/181 (24%), Positives = 60/181 (33%), Gaps = 32/181 (17%)
Query: 134 PESPAGP-GAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTA 192
P P G G +G +G + P +G G+P P+ FP
Sbjct: 1301 PPGPKGERGEKGESGPSGAAGPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGE-------- 1352
Query: 193 FLEGPGPAAGEQRSG--ASDGERG----PPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQ 246
PGPA + G DGE G P P GP K+ P P + + +
Sbjct: 1353 ----PGPAGQDGPPGDKGDDGEPGQTGSPGPTGEPGPSGPP--GKRGPPGPAGPEGRQGE 1406
Query: 247 AAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQP-PSAGRARDGGDGREAAVAGEG 305
+ G E PP G+ P +PG+P P R G G + G
Sbjct: 1407 KGAKGE-----AGLEGPP-----GKTGPIGPQGAPGKPGPDGLRGIPGPVGEQGLPGSPG 1456
Query: 306 P 306
P
Sbjct: 1457 P 1457
Score = 32.0 bits (71), Expect = 1.1
Identities = 55/226 (24%), Positives = 75/226 (33%), Gaps = 32/226 (14%)
Query: 92 PGLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRARDPESPAGPGAEGTTGGGSF 151
PG RA G+ + Q P+ D G + DP PG G G
Sbjct: 606 PGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGERGD 665
Query: 152 SQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPA--AGEQRSGAS 209
+ RGL P PR + P+ P +T PGP G Q
Sbjct: 666 DGEVGPRGL----PGEPGPRGLLGPK--GPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGP 719
Query: 210 DGERGPPPAR-LQGP--------EEGEVWTKKAPRRPQSDDDGEAQAAVRASWEQPADGP 260
G++G P A+ L GP E+G + P P +D G
Sbjct: 720 PGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADG------------PPGHPGK 767
Query: 261 ELPPRE-AQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEG 305
E PP E +G P+ + PG P + DG G + +G
Sbjct: 768 EGPPGEKGGQGPPGPQGPIGYPG--PRGVKGADGIRGLKGTKGEKG 811
Score = 30.0 bits (66), Expect = 4.1
Identities = 44/196 (22%), Positives = 59/196 (30%), Gaps = 34/196 (17%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRT---VAVYSPLALRRL 190
P PG G G GL+ G P P P P+ +
Sbjct: 1047 PGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPPGPPGPAGSPGERGPAGAAGPIGIPGR 1106
Query: 191 TAFLEGPGPAAGEQRSGASDGERGPP-------PARLQGPEEGEVWTKKAPRRPQSDDDG 243
PGP AGE+ + G +GP P L GP P P +D
Sbjct: 1107 PGPQGPPGP-AGEKGAPGEKGPQGPAGRDGLQGPVGLPGP--------AGPVGPPGEDGD 1157
Query: 244 EAQAAVRASWEQPAD-GPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVA 302
+ + D G + PP G P+ + PG PS G G++
Sbjct: 1158 KGEIGEPGQKGSKGDKGEQGPP-----GPTGPQGPIGQPG--PSGADGEPGPRGQQGLFG 1210
Query: 303 GEG-------PSPRSP 311
+G P P P
Sbjct: 1211 QKGDEGPRGFPGPPGP 1226
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 43.1 bits (100), Expect = 5e-04
Identities = 77/330 (23%), Positives = 110/330 (33%), Gaps = 40/330 (12%)
Query: 18 PPCSYRYPYPAATKGKGAAGGSWQQRGR-GCLPASSPCSAGAASLSFPGCGR-LTAAEYF 75
PP + P P G G + GR G + +S S+G+ S G R LT +
Sbjct: 1942 PPLARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSGSESSDRSGFRRQLTFIKES 2001
Query: 76 DSYQRERLMALLAQVGP----GLGPRARRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRRA 131
+R R A+ G PR R P + A CS R + RA
Sbjct: 2002 PGLRRRRSELSSAESAASAPQGASPRRGR-----------PALPAVFLCS--SRCEELRA 2048
Query: 132 RDPESPAGPGAEGTTGGGSFSQQPSRRGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLT 191
+ PA S ++P+RR + + P P TV Y+ L +
Sbjct: 2049 APRQGPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAARPETVKRYASLPHISVA 2108
Query: 192 AFLEGPGPAAGEQRSGA---SDGERGPPPARLQGPEEGEVWTKKAPRRPQSDD------D 242
+G PAA A SDGE P P R+ P G W RR + +D
Sbjct: 2109 RRPDGAVPAAPASADAARRSSDGEPRPLP-RVAAP--GTTW-----RRIRDEDVPHILRS 2160
Query: 243 GEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVA 302
A+ P D P PP + +P S + + + A
Sbjct: 2161 TLPATALPLRGSTPEDAPAGPPPRKTSDAVVQTEEVAAPKTNSSTSPSLETREPPGAPAG 2220
Query: 303 GE----GPSPRSPELGKERLRFQFLEQKYG 328
G+ G P L K + F+ + G
Sbjct: 2221 GQLSLLGSDVDGPSLAKAPISAPFVHEGLG 2250
>gi|239749251 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 42.7 bits (99), Expect = 6e-04
Identities = 58/231 (25%), Positives = 74/231 (32%), Gaps = 25/231 (10%)
Query: 99 RRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRR-ARDPESPAGPGAEGTTGGGSFSQQPSR 157
R G C + +++ PR +Q R QR P P EG+ GG SQ P
Sbjct: 142 RTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLP 201
Query: 158 RGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPA--AGEQRSGASDGERGP 215
+ +PQ G P P Y R A G GPA A G + P
Sbjct: 202 QETAAPAPQPGPTAP---PARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPP 258
Query: 216 PPARLQGPEEGEVWTKK-APRRPQSDDDGEAQAAVRASWEQPADGPELPP---------- 264
P +G G ++ PR PQ+ ++ + G PP
Sbjct: 259 APELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCR 318
Query: 265 ------REAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPR 309
R GE A P PP GR D G AG G R
Sbjct: 319 FCRRRRRRGGGGEGEGTHATHGPASPP--GRRHDEEVGAAVLRAGSGEGSR 367
Score = 32.3 bits (72), Expect = 0.84
Identities = 59/222 (26%), Positives = 74/222 (33%), Gaps = 38/222 (17%)
Query: 122 LGRRTLQRRARDPESPAGPGAEGTTG---------GGSFSQQPSRRGLEQGSPQNGAPRP 172
+G+ R P P G+ + G G + RG G+ Q G
Sbjct: 76 MGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQ 135
Query: 173 MR--FPRT---VAVYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGE 227
R F RT A+ L R EG G A QR G + P P R +G G
Sbjct: 136 CRSLFLRTKGLCALLLELPPRPPPNLQEG-GQRAIFQRPPVYLGNK-PTPPRQEGSFGGR 193
Query: 228 VWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQP--- 284
K P PQ + A A PA P RE G A R + P QP
Sbjct: 194 --PKSQPPLPQ---ETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGS--GPAQPAHL 246
Query: 285 ----------PSAGRARDGGDGREAAVAGEGPSPRSPELGKE 316
P A R+G + AG P PR P+ +E
Sbjct: 247 PLPGPAHSPAPPAPELREGR--APGSTAGRRPRPREPQAAEE 286
>gi|239745658 PREDICTED: hypothetical protein XP_002344164 [Homo
sapiens]
Length = 149
Score = 42.7 bits (99), Expect = 6e-04
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 220 LQGPEEGEVWTKKAPRRPQSDDDGEAQAAVRASW------EQPADGPELPPREAQEGEAA 273
L+ P G WT ++ R+P + D G+ A RASW E A+ + E QE A
Sbjct: 10 LKRPLAGRSWTCRSGRKPGALDWGDRSEA-RASWAWRVRCEAEAEAGPVQAFERQEAGPA 68
Query: 274 PRSALRSPGQPPSAGRARDGGDGR-EAAVAGEGP---SPRSPELGKERL 318
++A RS P A +++ G GR A++ GP + R ELG ERL
Sbjct: 69 -KAAWRSSSAPEEAAKSQKRGLGRPPRAMSWAGPKEATGRQEELGLERL 116
>gi|239743343 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 42.7 bits (99), Expect = 6e-04
Identities = 58/231 (25%), Positives = 74/231 (32%), Gaps = 25/231 (10%)
Query: 99 RRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRR-ARDPESPAGPGAEGTTGGGSFSQQPSR 157
R G C + +++ PR +Q R QR P P EG+ GG SQ P
Sbjct: 142 RTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLP 201
Query: 158 RGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPA--AGEQRSGASDGERGP 215
+ +PQ G P P Y R A G GPA A G + P
Sbjct: 202 QETAAPAPQPGPTAP---PARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPP 258
Query: 216 PPARLQGPEEGEVWTKK-APRRPQSDDDGEAQAAVRASWEQPADGPELPP---------- 264
P +G G ++ PR PQ+ ++ + G PP
Sbjct: 259 APELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCR 318
Query: 265 ------REAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPR 309
R GE A P PP GR D G AG G R
Sbjct: 319 FCRRRRRRGGGGEGEGTHATHGPASPP--GRRHDEEVGAAVLRAGSGEGSR 367
Score = 32.3 bits (72), Expect = 0.84
Identities = 59/222 (26%), Positives = 74/222 (33%), Gaps = 38/222 (17%)
Query: 122 LGRRTLQRRARDPESPAGPGAEGTTG---------GGSFSQQPSRRGLEQGSPQNGAPRP 172
+G+ R P P G+ + G G + RG G+ Q G
Sbjct: 76 MGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQ 135
Query: 173 MR--FPRT---VAVYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGE 227
R F RT A+ L R EG G A QR G + P P R +G G
Sbjct: 136 CRSLFLRTKGLCALLLELPPRPPPNLQEG-GQRAIFQRPPVYLGNK-PTPPRQEGSFGGR 193
Query: 228 VWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQP--- 284
K P PQ + A A PA P RE G A R + P QP
Sbjct: 194 --PKSQPPLPQ---ETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGS--GPAQPAHL 246
Query: 285 ----------PSAGRARDGGDGREAAVAGEGPSPRSPELGKE 316
P A R+G + AG P PR P+ +E
Sbjct: 247 PLPGPAHSPAPPAPELREGR--APGSTAGRRPRPREPQAAEE 286
>gi|239509031 PREDICTED: similar to hCG2042508 [Homo sapiens]
Length = 460
Score = 42.7 bits (99), Expect = 6e-04
Identities = 58/231 (25%), Positives = 74/231 (32%), Gaps = 25/231 (10%)
Query: 99 RRAGSCDVAVQVSPRIDAAVQCSLGRRTLQRR-ARDPESPAGPGAEGTTGGGSFSQQPSR 157
R G C + +++ PR +Q R QR P P EG+ GG SQ P
Sbjct: 142 RTKGLCALLLELPPRPPPNLQEGGQRAIFQRPPVYLGNKPTPPRQEGSFGGRPKSQPPLP 201
Query: 158 RGLEQGSPQNGAPRPMRFPRTVAVYSPLALRRLTAFLEGPGPA--AGEQRSGASDGERGP 215
+ +PQ G P P Y R A G GPA A G + P
Sbjct: 202 QETAAPAPQPGPTAP---PARPPAYESREGPRGRAESRGSGPAQPAHLPLPGPAHSPAPP 258
Query: 216 PPARLQGPEEGEVWTKK-APRRPQSDDDGEAQAAVRASWEQPADGPELPP---------- 264
P +G G ++ PR PQ+ ++ + G PP
Sbjct: 259 APELREGRAPGSTAGRRPRPREPQAAEESGCATVGLRRGDCDRAGSSQPPATSGNGERCR 318
Query: 265 ------REAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPR 309
R GE A P PP GR D G AG G R
Sbjct: 319 FCRRRRRRGGGGEGEGTHATHGPASPP--GRRHDEEVGAAVLRAGSGEGSR 367
Score = 32.3 bits (72), Expect = 0.84
Identities = 59/222 (26%), Positives = 74/222 (33%), Gaps = 38/222 (17%)
Query: 122 LGRRTLQRRARDPESPAGPGAEGTTG---------GGSFSQQPSRRGLEQGSPQNGAPRP 172
+G+ R P P G+ + G G + RG G+ Q G
Sbjct: 76 MGKYHAHGHLRAPVFPVAKGSVPSEGRATPPLPHPGDHHPRHRKNRGPSAGTSQLGKKTQ 135
Query: 173 MR--FPRT---VAVYSPLALRRLTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGE 227
R F RT A+ L R EG G A QR G + P P R +G G
Sbjct: 136 CRSLFLRTKGLCALLLELPPRPPPNLQEG-GQRAIFQRPPVYLGNK-PTPPRQEGSFGGR 193
Query: 228 VWTKKAPRRPQSDDDGEAQAAVRASWEQPADGPELPPREAQEGEAAPRSALRSPGQP--- 284
K P PQ + A A PA P RE G A R + P QP
Sbjct: 194 --PKSQPPLPQ---ETAAPAPQPGPTAPPARPPAYESREGPRGRAESRGS--GPAQPAHL 246
Query: 285 ----------PSAGRARDGGDGREAAVAGEGPSPRSPELGKE 316
P A R+G + AG P PR P+ +E
Sbjct: 247 PLPGPAHSPAPPAPELREGR--APGSTAGRRPRPREPQAAEE 286
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 42.7 bits (99), Expect = 6e-04
Identities = 46/156 (29%), Positives = 63/156 (40%), Gaps = 14/156 (8%)
Query: 134 PESPAGPGAEGTTGGGSFSQQPSRRGLEQ----GSPQNGAPRPMRFPRTVAVYSPLALRR 189
P PA P A+ T S+QP + L Q G P P + P T V +P L +
Sbjct: 365 PLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAK-PPTQQVGTPKPLAQ 423
Query: 190 LTAFLEGPGPAAGEQRSGASDGERGPPPARLQGPEEGEVWTKKAPRRPQSDDDGEAQAAV 249
L+ P A G ++ G PA+ GP + + P +P S G A+
Sbjct: 424 QPG-LQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSA-QQTGPTKPPSQLPGPAKPPP 481
Query: 250 RASWEQPADGPELPPREAQEGEAAPRSALRSPGQPP 285
+QP GP PP + Q G A P S +PP
Sbjct: 482 ----QQP--GPAKPPPQ-QPGSAKPPSQQPGSTKPP 510
Score = 31.2 bits (69), Expect = 1.9
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 16/116 (13%)
Query: 214 GPPPARLQGPEEGEVWTKKAPRRPQ------SDDDGEAQAAVR--ASWEQPAD--GPELP 263
G PPA+ G E+ + K P +P + G + V+ + + PA GP P
Sbjct: 312 GKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKP 371
Query: 264 PREAQEGEAAPRSALRSP---GQPPSAGR--ARDGGDGREAAVAGEGPSPRSPELG 314
P + Q G P S P QPP G+ A+ G + P P + + G
Sbjct: 372 PAQ-QTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPG 426
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,405,629
Number of Sequences: 37866
Number of extensions: 1393140
Number of successful extensions: 10632
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 923
Number of HSP's that attempted gapping in prelim test: 8205
Number of HSP's gapped (non-prelim): 2710
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.