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Search of human proteins with 27735067
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27735067 hypothetical protein LOC126353 [Homo sapiens]
(679 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27735067 hypothetical protein LOC126353 [Homo sapiens] 1384 0.0
gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo s... 47 8e-05
gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens] 46 1e-04
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 43 0.001
gi|178557734 microtubule-associated protein tau isoform 6 [Homo ... 42 0.001
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s... 42 0.001
gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens] 42 0.002
gi|211971074 A kinase (PRKA) anchor protein 2 isoform 2 [Homo sa... 42 0.002
gi|51873058 A kinase (PRKA) anchor protein 2 isoform 1 [Homo sap... 42 0.002
gi|91208420 bassoon protein [Homo sapiens] 40 0.007
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 39 0.012
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 39 0.016
gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens] 39 0.021
gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo ... 38 0.027
gi|163310749 LIM and calponin homology domains 1 isoform e [Homo... 38 0.035
gi|163310747 LIM and calponin homology domains 1 isoform d [Homo... 38 0.035
gi|163310745 LIM and calponin homology domains 1 isoform c [Homo... 38 0.035
gi|163310743 LIM and calponin homology domains 1 isoform b [Homo... 38 0.035
gi|163310741 LIM and calponin homology domains 1 isoform a [Homo... 38 0.035
gi|221139926 NHS-like 1 [Homo sapiens] 37 0.046
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 37 0.060
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 37 0.078
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens] 36 0.10
gi|225735627 disco-interacting protein 2A isoform f [Homo sapiens] 36 0.13
gi|41281612 zinc finger protein 828 [Homo sapiens] 36 0.13
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 36 0.13
gi|118600967 shroom family member 4 [Homo sapiens] 35 0.17
gi|110349719 titin isoform N2-A [Homo sapiens] 35 0.17
gi|22547204 hairless protein isoform a [Homo sapiens] 35 0.17
gi|22547207 hairless protein isoform b [Homo sapiens] 35 0.17
>gi|27735067 hypothetical protein LOC126353 [Homo sapiens]
Length = 679
Score = 1384 bits (3583), Expect = 0.0
Identities = 679/679 (100%), Positives = 679/679 (100%)
Query: 1 MDRVTRYPILGIPQAHRGTGLVLDGDTSYTYHLVCMGPEASGWGQDEPQTWPTDHRAQQG 60
MDRVTRYPILGIPQAHRGTGLVLDGDTSYTYHLVCMGPEASGWGQDEPQTWPTDHRAQQG
Sbjct: 1 MDRVTRYPILGIPQAHRGTGLVLDGDTSYTYHLVCMGPEASGWGQDEPQTWPTDHRAQQG 60
Query: 61 VQRQGVSYSVHAYTGQPSPRGLHSENREDEGWQVYRLGARDAHQGRPTWALRPEDGEDKE 120
VQRQGVSYSVHAYTGQPSPRGLHSENREDEGWQVYRLGARDAHQGRPTWALRPEDGEDKE
Sbjct: 61 VQRQGVSYSVHAYTGQPSPRGLHSENREDEGWQVYRLGARDAHQGRPTWALRPEDGEDKE 120
Query: 121 MKTYRLDAGDADPRRLCDLERERWAVIQGQAVRKSSTVATLQGTPDHGDPRTPGPPRSTP 180
MKTYRLDAGDADPRRLCDLERERWAVIQGQAVRKSSTVATLQGTPDHGDPRTPGPPRSTP
Sbjct: 121 MKTYRLDAGDADPRRLCDLERERWAVIQGQAVRKSSTVATLQGTPDHGDPRTPGPPRSTP 180
Query: 181 LEENVVDREQIDFLAARQQFLSLEQANKGAPHSSPARGTPAGTTPGASQAPKAFNKPHLA 240
LEENVVDREQIDFLAARQQFLSLEQANKGAPHSSPARGTPAGTTPGASQAPKAFNKPHLA
Sbjct: 181 LEENVVDREQIDFLAARQQFLSLEQANKGAPHSSPARGTPAGTTPGASQAPKAFNKPHLA 240
Query: 241 NGHVVPIKPQVKGVVREENKVRAVPTWASVQVVDDPGSLASVESPGTPKETPIEREIRLA 300
NGHVVPIKPQVKGVVREENKVRAVPTWASVQVVDDPGSLASVESPGTPKETPIEREIRLA
Sbjct: 241 NGHVVPIKPQVKGVVREENKVRAVPTWASVQVVDDPGSLASVESPGTPKETPIEREIRLA 300
Query: 301 QEREADLREQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYVQRDIVQETQ 360
QEREADLREQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYVQRDIVQETQ
Sbjct: 301 QEREADLREQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYVQRDIVQETQ 360
Query: 361 REEDHRREGLHVGRASTPDWVSEGPQPGLRRALSSDSILSPAPDARAADPAPEVRKVNRI 420
REEDHRREGLHVGRASTPDWVSEGPQPGLRRALSSDSILSPAPDARAADPAPEVRKVNRI
Sbjct: 361 REEDHRREGLHVGRASTPDWVSEGPQPGLRRALSSDSILSPAPDARAADPAPEVRKVNRI 420
Query: 421 PPDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLST 480
PPDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLST
Sbjct: 421 PPDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLST 480
Query: 481 KQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHVWGWEVAGAPALRLQK 540
KQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHVWGWEVAGAPALRLQK
Sbjct: 481 KQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHVWGWEVAGAPALRLQK 540
Query: 541 SQSSDLLERERESVLRREQEVAEERRNALFPEVFSPTPDENSDQNSRSSSQASGITGSYS 600
SQSSDLLERERESVLRREQEVAEERRNALFPEVFSPTPDENSDQNSRSSSQASGITGSYS
Sbjct: 541 SQSSDLLERERESVLRREQEVAEERRNALFPEVFSPTPDENSDQNSRSSSQASGITGSYS 600
Query: 601 VSESPFFSPIHLHSNVAWTVEDPVDSAPPGQRKKEQWYAGINPSDGINSEVLEAIRVTRH 660
VSESPFFSPIHLHSNVAWTVEDPVDSAPPGQRKKEQWYAGINPSDGINSEVLEAIRVTRH
Sbjct: 601 VSESPFFSPIHLHSNVAWTVEDPVDSAPPGQRKKEQWYAGINPSDGINSEVLEAIRVTRH 660
Query: 661 KNAMAERWESRIYASEEDD 679
KNAMAERWESRIYASEEDD
Sbjct: 661 KNAMAERWESRIYASEEDD 679
>gi|50659104 RAB11 family interacting protein 1 isoform 3 [Homo
sapiens]
Length = 1283
Score = 46.6 bits (109), Expect = 8e-05
Identities = 100/453 (22%), Positives = 157/453 (34%), Gaps = 100/453 (22%)
Query: 216 ARGTPAGTTPGASQAPKAFNKPHL----------------ANGHVVPIKPQVKGVVREEN 259
A+G ++P +S +PK F K HL G + + + ++
Sbjct: 331 AKGEIKDSSPSSSPSPKGFRKKHLFSSTENLAAGSWKEPAEGGGLSSDRQLSESSTKDSL 390
Query: 260 KVRAVPTWASVQVVDDPGSLASVESPGTPKETPIEREIRLAQEREADL------------ 307
K +P++ +V G L +P + T +E + + R + L
Sbjct: 391 KSMTLPSYRPAPLVS--GDLRENMAPANSEATKEAKESKKPESRRSSLLSLMTGKKDVAK 448
Query: 308 ------------REQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYVQRDI 355
RE+ G+ E P L+ + TA R SL + D+
Sbjct: 449 GSEGENPLTVPGREKEGMLMGVKPGEDASGPAEDLVRRSEKDTAAVVSRQGSSLNLFEDV 508
Query: 356 -VQETQREEDHRREGLHVGRASTPDWVSEGPQPGLRRALSSDSILSP-APDARAADP--- 410
+ E + E + + E P+P I SP AP RA P
Sbjct: 509 QITEPEAEPESKSE----------------PRP---------PISSPRAPQTRAVKPRLE 543
Query: 411 -APEVRKVNRIPPDAYQPYLSPGTPQLEFSAFGAFGKPSSLS-TAEAKAATSPKATMSPR 468
+PE + R+P P P P S+ G PS L A+ +++ SP S
Sbjct: 544 VSPEAQPTARLPSPTDSPSSLPPLP----SSSGQASVPSELGHGADTQSSESPSVFSS-- 597
Query: 469 HLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHVWGW 528
LS P+ST S P P +RG + E PL +A + + G
Sbjct: 598 -LSSPIAAPIST----STPIESWPLVDRGQAKSEG---PPLLPKAELQTESLTPVPNSGS 649
Query: 529 EVAGA----PALRLQKSQSSDLLERERE-------SVLRREQEVAEERRNALFPEVFSPT 577
V G+ P+ K L+ R RE S L E+ + E+ E
Sbjct: 650 SVLGSLFKQPSFPANKGTEDSLMGRTRETGTEKNTSSLELEESLPEQPETGRQEEELPRF 709
Query: 578 PDENSDQNSRSSSQASGITGSYSVSESPFFSPI 610
P + D S SS +A + + S+S SP+
Sbjct: 710 PCKKQDY-SPSSGEAQEVPFALSLSSDGAVSPV 741
>gi|6005709 PALM2-AKAP2 protein isoform 1 [Homo sapiens]
Length = 1103
Score = 46.2 bits (108), Expect = 1e-04
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 19/167 (11%)
Query: 530 VAGAPALRLQKSQSSDLLERERESVLRREQEVAEERRNALFPEVFSPTPDENSDQNSRSS 589
+ G LR +K ++ ++E E + RE+E+ +R+ + SP SR+
Sbjct: 936 MVGPFKLRSRKQRTLSMIEEEIRAAQEREEELKRQRQ--VLQSTQSPRTKNAPSLPSRTC 993
Query: 590 SQ-ASGITGSYS-----VSESPFFSPIHLHSNVAWT----------VED-PVDSAPPGQR 632
+ A G +E P P A T +ED + +R
Sbjct: 994 YKTAPGKIEKVKPPPSPTTEGPSLQPDLAPEEAAGTQRPKNLMQTLMEDYETHKSKRRER 1053
Query: 633 KKEQWYAGINPSDGINSEVLEAIRVTRHKNAMAERWESRIYASEEDD 679
+ Y S + SEVLEA RV R K+A+A RWE+ IYA++E++
Sbjct: 1054 MDDSSYTSKLLSCKVTSEVLEATRVNRRKSALALRWEAGIYANQEEE 1100
Score = 35.0 bits (79), Expect = 0.23
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 293 IEREIRLAQEREADLREQRGLRQATDHQELVEIPTRPLLT 332
IE EIR AQERE +L+ QR + Q+T P+ P T
Sbjct: 953 IEEEIRAAQEREEELKRQRQVLQSTQSPRTKNAPSLPSRT 992
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 42.7 bits (99), Expect = 0.001
Identities = 61/249 (24%), Positives = 92/249 (36%), Gaps = 32/249 (12%)
Query: 387 PGLRRALSSDSILSPA-PDARAADPAPEVRKVN-RIPPDAYQPYLSPGTPQLEFSAF--G 442
P R L SD + P A P P +K ++P + P + P E G
Sbjct: 1689 PSCRDDLLSDYFRKASDPPAIGGQPGPPAKKEGAKMPTNFVAPTVKMAAPTSEGRPLKPG 1748
Query: 443 AFGKPS-SLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRW 501
+ KP+ L+ AEA + +P+ P+ LS L ++A PP A+R
Sbjct: 1749 QYVKPNFRLTEAEAPPSVAPRQAQPPQSLS------LGRPRQAPVPPASHAPASRSASLS 1802
Query: 502 EYFRLRP---LRFRAPD-----EPQQAQVPHVWGWEVAGAPALRLQKSQSSDLLERERES 553
F L LR P+ PQ+ P G G+ L+ SS L RER
Sbjct: 1803 RAFSLASADLLRASGPEACKQESPQKLGAPEALGGRETGSHTLQSPAPPSSHSLARERTP 1862
Query: 554 VLRR----------EQEVAEERRNALFP---EVFSPTPDENSDQNSRSSSQASGITGSYS 600
++ + + RR +L P E +P + ++ + GS S
Sbjct: 1863 LVGKAGSSCQGPGPRSRPLDTRRFSLAPPKEERLAPLHQSATAPAIATAGAGAAAAGSGS 1922
Query: 601 VSESPFFSP 609
S+ FSP
Sbjct: 1923 NSQLLHFSP 1931
>gi|178557734 microtubule-associated protein tau isoform 6 [Homo
sapiens]
Length = 776
Score = 42.4 bits (98), Expect = 0.001
Identities = 55/240 (22%), Positives = 89/240 (37%), Gaps = 44/240 (18%)
Query: 283 ESPGTPKETPIEREIRLAQEREADLRE----QRGLRQATDHQELVEIPTRP--------- 329
E PG+ +E +R++ + +++ + Q G T +E IP P
Sbjct: 210 ERPGSKEEVDEDRDVDESSPQDSPPSKASPAQDGRPPQTAAREATSIPGFPAEGAIPLPV 269
Query: 330 -LLTKLSLITAPRRERGRPSLYVQR------------DIVQETQREEDHRREGLHVGRAS 376
L+K+S P E PS+ + +I Q+E+ H E H+GRA+
Sbjct: 270 DFLSKVST-EIPASEPDGPSVGRAKGQDAPLEFTFHVEITPNVQKEQAHSEE--HLGRAA 326
Query: 377 TPDWVSEGPQ---PGLRRALSSDSILSPAPDARAADPAPEVRKVNRIPPDAYQPYLSPGT 433
P EGP+ P L + P P + AP + V+R+ P L
Sbjct: 327 FPGAPGEGPEARGPSLGEDTKEADL--PEPSEKQPAAAPRGKPVSRV------PQLKARM 378
Query: 434 PQLEFSAFGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPRGCPQ 493
G+ K + ST + + +SP+H + S PL P CP+
Sbjct: 379 VSKSKDGTGSDDKKAKTSTRSSAKTLKNRPCLSPKHPTPGSSDPLIQPSS----PAVCPE 434
>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
sapiens]
Length = 758
Score = 42.4 bits (98), Expect = 0.001
Identities = 55/240 (22%), Positives = 89/240 (37%), Gaps = 44/240 (18%)
Query: 283 ESPGTPKETPIEREIRLAQEREADLRE----QRGLRQATDHQELVEIPTRP--------- 329
E PG+ +E +R++ + +++ + Q G T +E IP P
Sbjct: 210 ERPGSKEEVDEDRDVDESSPQDSPPSKASPAQDGRPPQTAAREATSIPGFPAEGAIPLPV 269
Query: 330 -LLTKLSLITAPRRERGRPSLYVQR------------DIVQETQREEDHRREGLHVGRAS 376
L+K+S P E PS+ + +I Q+E+ H E H+GRA+
Sbjct: 270 DFLSKVST-EIPASEPDGPSVGRAKGQDAPLEFTFHVEITPNVQKEQAHSEE--HLGRAA 326
Query: 377 TPDWVSEGPQ---PGLRRALSSDSILSPAPDARAADPAPEVRKVNRIPPDAYQPYLSPGT 433
P EGP+ P L + P P + AP + V+R+ P L
Sbjct: 327 FPGAPGEGPEARGPSLGEDTKEADL--PEPSEKQPAAAPRGKPVSRV------PQLKARM 378
Query: 434 PQLEFSAFGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPRGCPQ 493
G+ K + ST + + +SP+H + S PL P CP+
Sbjct: 379 VSKSKDGTGSDDKKAKTSTRSSAKTLKNRPCLSPKHPTPGSSDPLIQPSS----PAVCPE 434
>gi|22325356 PALM2-AKAP2 protein isoform 2 [Homo sapiens]
Length = 1090
Score = 42.0 bits (97), Expect = 0.002
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 530 VAGAPALRLQKSQSSDLLERERESVLRREQEVAEERRNALFPEVFSPTPDENSDQNSRSS 589
+ G LR +K ++ ++E E + RE+E+ +R+ + SP SR+
Sbjct: 936 MVGPFKLRSRKQRTLSMIEEEIRAAQEREEELKRQRQ--VLQSTQSPRTKNAPSLPSRTC 993
Query: 590 SQ-ASGITGSYSVSESPFFSPIHLHSNVAWTVEDPVDSAPPGQRKKE---------QWYA 639
+ A G SP L ++A + A QR K + +
Sbjct: 994 YKTAPGKIEKVKPPPSPTTEGPSLQPDLA------PEEAAGTQRPKNLMQTLMEDYETHK 1047
Query: 640 GINPSDGINSEVLEAIRVTRHKNAMAERWESRIYASEEDD 679
+S VLEA RV R K+A+A RWE+ IYA++E++
Sbjct: 1048 SKRRERMDDSSVLEATRVNRRKSALALRWEAGIYANQEEE 1087
Score = 35.0 bits (79), Expect = 0.23
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 293 IEREIRLAQEREADLREQRGLRQATDHQELVEIPTRPLLT 332
IE EIR AQERE +L+ QR + Q+T P+ P T
Sbjct: 953 IEEEIRAAQEREEELKRQRQVLQSTQSPRTKNAPSLPSRT 992
>gi|211971074 A kinase (PRKA) anchor protein 2 isoform 2 [Homo
sapiens]
Length = 859
Score = 42.0 bits (97), Expect = 0.002
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 530 VAGAPALRLQKSQSSDLLERERESVLRREQEVAEERRNALFPEVFSPTPDENSDQNSRSS 589
+ G LR +K ++ ++E E + RE+E+ +R+ + SP SR+
Sbjct: 705 MVGPFKLRSRKQRTLSMIEEEIRAAQEREEELKRQRQ--VLQSTQSPRTKNAPSLPSRTC 762
Query: 590 SQ-ASGITGSYSVSESPFFSPIHLHSNVAWTVEDPVDSAPPGQRKKE---------QWYA 639
+ A G SP L ++A + A QR K + +
Sbjct: 763 YKTAPGKIEKVKPPPSPTTEGPSLQPDLA------PEEAAGTQRPKNLMQTLMEDYETHK 816
Query: 640 GINPSDGINSEVLEAIRVTRHKNAMAERWESRIYASEEDD 679
+S VLEA RV R K+A+A RWE+ IYA++E++
Sbjct: 817 SKRRERMDDSSVLEATRVNRRKSALALRWEAGIYANQEEE 856
Score = 35.0 bits (79), Expect = 0.23
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 293 IEREIRLAQEREADLREQRGLRQATDHQELVEIPTRPLLT 332
IE EIR AQERE +L+ QR + Q+T P+ P T
Sbjct: 722 IEEEIRAAQEREEELKRQRQVLQSTQSPRTKNAPSLPSRT 761
>gi|51873058 A kinase (PRKA) anchor protein 2 isoform 1 [Homo
sapiens]
Length = 948
Score = 42.0 bits (97), Expect = 0.002
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 530 VAGAPALRLQKSQSSDLLERERESVLRREQEVAEERRNALFPEVFSPTPDENSDQNSRSS 589
+ G LR +K ++ ++E E + RE+E+ +R+ + SP SR+
Sbjct: 794 MVGPFKLRSRKQRTLSMIEEEIRAAQEREEELKRQRQ--VLQSTQSPRTKNAPSLPSRTC 851
Query: 590 SQ-ASGITGSYSVSESPFFSPIHLHSNVAWTVEDPVDSAPPGQRKKE---------QWYA 639
+ A G SP L ++A + A QR K + +
Sbjct: 852 YKTAPGKIEKVKPPPSPTTEGPSLQPDLA------PEEAAGTQRPKNLMQTLMEDYETHK 905
Query: 640 GINPSDGINSEVLEAIRVTRHKNAMAERWESRIYASEEDD 679
+S VLEA RV R K+A+A RWE+ IYA++E++
Sbjct: 906 SKRRERMDDSSVLEATRVNRRKSALALRWEAGIYANQEEE 945
Score = 35.0 bits (79), Expect = 0.23
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 293 IEREIRLAQEREADLREQRGLRQATDHQELVEIPTRPLLT 332
IE EIR AQERE +L+ QR + Q+T P+ P T
Sbjct: 811 IEEEIRAAQEREEELKRQRQVLQSTQSPRTKNAPSLPSRT 850
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 40.0 bits (92), Expect = 0.007
Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 384 GPQPGLRRALSSDSILSPAPDARAADPAPEVRKVNRIPPDAYQPYLS-PGTPQLEFSAFG 442
GPQPG R+A ++ + P P A+AA P PEV +V+ PP +P + P P E A
Sbjct: 271 GPQPGSRQAETARATSVPGP-AQAAAP-PEVGRVSPQPPQPTKPSTAEPRPPAGEAPAKS 328
Query: 443 AFGKPSSLSTAE--------------AKAATSPKATMSPRHLSESSGKPLSTK 481
A P+ L E A T MS + +++ G+P +K
Sbjct: 329 ATAVPAGLGATEQTQEGLTGKLFGLGASLLTQASTLMSVQPEADTQGQPAPSK 381
Score = 37.0 bits (84), Expect = 0.060
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 45/223 (20%)
Query: 276 PGSLASVESPGTPKETPIEREIRLAQEREADLREQRGL----RQATDHQELVEIPTRPLL 331
P SL+S+E + +R Q+R+A R L +++ +EL E LL
Sbjct: 996 PTSLSSLEEDSDSSPSRRQRLEEAKQQRKARHRSHGPLLPTIEDSSEEEELRE--EEELL 1053
Query: 332 TKLSLITAPRRERGRPSLYVQRDIVQETQREEDHRREGLHVGRASTPDWVSEGPQPGLRR 391
+ + ++R R + ++T+R+++ R R+ TP
Sbjct: 1054 REQEKMREVEQQRIRST-------ARKTRRDKEELRAQRRRERSKTPP------------ 1094
Query: 392 ALSSDSILSPAPDARAADP---APEVRKVNRIPPDAYQPYLSPGTPQLEFSAFGAFGKPS 448
S LSP DA + A E+ +++R Y P +P L+ A G PS
Sbjct: 1095 -----SNLSPIEDASPTEELRQAAEMEELHRSSCSEYSP-----SPSLDSEAEALDGGPS 1144
Query: 449 SL--STAEAKAAT-----SPKATMSPRHLSESSGKPLSTKQEA 484
L S +E T SP T S + SSG+PL + +EA
Sbjct: 1145 RLYKSGSEYNLPTFMSLYSPTETPSGSSTTPSSGRPLKSAEEA 1187
Score = 33.1 bits (74), Expect = 0.87
Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 9/153 (5%)
Query: 410 PAPEVRKV-NRIPPDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATMSPR 468
PAP + + +PP YL G P A GA G PS A P T +P
Sbjct: 2262 PAPSRFPIASSVPPAEGPVYL--GKPAAA-KAPGA-GGPSRPEMPVGAAREEPLPTTTPA 2317
Query: 469 HLSESSGKPLSTKQEASKPPR-GCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHVWG 527
+ E++G P KPP P G + F + +E Q+ Q +
Sbjct: 2318 AIKEAAGAPAPAPLAGQKPPADAAPGGGSGALSRPGFEKEE---ASQEERQRKQQEQLLQ 2374
Query: 528 WEVAGAPALRLQKSQSSDLLERERESVLRREQE 560
E +L++ + + LERER + R +E
Sbjct: 2375 LERERVELEKLRQLRLQEELERERVELQRHREE 2407
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 39.3 bits (90), Expect = 0.012
Identities = 44/170 (25%), Positives = 63/170 (37%), Gaps = 17/170 (10%)
Query: 331 LTKLSLITAPRRERGRPSLYVQRDIVQETQREEDHRREGLH--VGRASTPDWVSEGPQPG 388
L S+ P R+ +R + +RE RR+ L + + ++ S G
Sbjct: 1037 LENTSIKVGPARKNVAKGRMARRS-KRSRRRETQDRRKSLFKKISKQTSVLHTSRSFSSG 1095
Query: 389 LRRALSSDSIL--------SPAPDARAADPAPEV-RKVNRIPPDAYQPYLSPGTPQLEFS 439
L +LSS L SP+P PAP+V PP A SP +P
Sbjct: 1096 LHHSLSSSESLPGSPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASP----- 1150
Query: 440 AFGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPR 489
A +PSSL AK T + S PL+ ++ PPR
Sbjct: 1151 AAAGHTRPSSLHGLAAKLGPPRPKTGRRKSTSSIPPSPLACPPISAPPPR 1200
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 38.9 bits (89), Expect = 0.016
Identities = 57/226 (25%), Positives = 86/226 (38%), Gaps = 15/226 (6%)
Query: 366 RREGLHVGRASTPDWVSEGPQPGLRRALSSDSILSPAPDARAADPAPEVRKVNRIPPDAY 425
RR R S P P P +R +S P P RA+ P R+V+ PP
Sbjct: 587 RRRSPSPRRYSPPIQRRYSPSPPPKRRTASPP---PPPKRRASPSPPPKRRVSHSPPPKQ 643
Query: 426 Q--PYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKA-TMSPR-HLSESSGKPLSTK 481
+ P +P L S+ G S ST EA++ K + SPR ++S P +
Sbjct: 644 RSSPVTKRRSPSL--SSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVR 701
Query: 482 QEASKPP--RGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHV-WGWEVAGAPALRL 538
+ AS P R P + +R P + + P V V V+G+P
Sbjct: 702 RGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAA 761
Query: 539 QKSQSSDLLERERESVLRREQEVAEERRNALFPEVFSPTPDENSDQ 584
+K + + + V ++ + P SP+P NSDQ
Sbjct: 762 KKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTP---SPSPPRNSDQ 804
Score = 36.6 bits (83), Expect = 0.078
Identities = 103/510 (20%), Positives = 171/510 (33%), Gaps = 73/510 (14%)
Query: 133 PRRLCDLERERWAVIQGQAVRKSSTVATLQGTPDHGDP-RTPGPPRSTPLEENVVDREQI 191
PRR+ R R + + R+SS A+L G+ R+ PP+ P + R+
Sbjct: 329 PRRMPPPPRHRRSRSPVRRRRRSS--ASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRK-- 384
Query: 192 DFLAARQQFLSLEQANKGAPHSSPARG----TPAGTTPGA---SQAPKAFNKPHLANGHV 244
+ +P +SP R +P T P S P+ N+ + V
Sbjct: 385 --------------TRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSV 430
Query: 245 VPIKPQVKGVVREENKVRAVPTWA--------SVQVVDDPGSLASVESPGTPKETPIERE 296
P + K + + R P+ A S D G +A+ +S + R+
Sbjct: 431 SPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADS--VQQRRQYRRQ 488
Query: 297 IRLAQEREADLREQRGLRQATDHQELVEIPTR----------PLLTKLSLITAPR-RERG 345
+ + R H + E+ R P K T+PR R R
Sbjct: 489 NQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRR 548
Query: 346 RPSLYVQRDIVQETQREEDHRREGLHVGRASTPDWVSEGPQPGLRRALSSDSILSPAPDA 405
PS R + RR R TP P P RR S SP P
Sbjct: 549 SPSPPPTRRRRSPSPAPPPRRR------RTPTPPPRRRTPSPPPRRRSPSPRRYSP-PIQ 601
Query: 406 RAADPAPEVRKVNRIPPDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKA---ATSPK 462
R P+P ++ PP + SP P + K S + ++ ++ +
Sbjct: 602 RRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHR 661
Query: 463 ATMSPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQV 522
SP + + P K+ + P PQ + P+R A PQ+ Q
Sbjct: 662 KGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSP--------PPVRRGASSSPQRRQS 713
Query: 523 PHVWGWEVAGAPALRLQKSQSSDLLERERESVLRREQEVAEERRNALFPEVFS---PTPD 579
P + P R+ ++ +++ + + V+ R + PE + P P
Sbjct: 714 P-----SPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPP 768
Query: 580 ENSDQNSRSSSQASGITGSYSVSESPFFSP 609
S S++ + + + S +P SP
Sbjct: 769 SPVQSQSPSTNWSPAVPVKKAKSPTPSPSP 798
Score = 30.0 bits (66), Expect = 7.3
Identities = 50/236 (21%), Positives = 89/236 (37%), Gaps = 30/236 (12%)
Query: 295 REIRLAQEREADLREQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYVQRD 354
++ ++ QE+ A +++Q + D +E K +PRR + R +R
Sbjct: 132 KQRQIEQEKLASMKKQDEDKDKRDKEE-----KESSREKRERSRSPRRRKSRSPSPRRRS 186
Query: 355 IVQETQREEDHRREGLHVGRASTPDWVSEGPQPGLRRALSSDSILSPAPDARAADPAPEV 414
+R+ H R H ++ +P E + L S+ P + A ++
Sbjct: 187 SPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEK--TPELPEPSVKVKEPSVQEATSTSDI 244
Query: 415 RKVNRIPPDAYQPYLSPGTPQLEFSAFGAFGK----PSSLSTAEAKAAT---SPKATMSP 467
KV + +P P P E ++ K P S S +++++ T SP T P
Sbjct: 245 LKVPK-----PEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHT-RP 298
Query: 468 RHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVP 523
R S + S ++ S PR P R R P R P ++++ P
Sbjct: 299 RRRHRSRSRSYSPRRRPS--PRRRPSPRR--------RTPPRRMPPPPRHRRSRSP 344
>gi|151108509 Rho GTPase-activating protein RICH2 [Homo sapiens]
Length = 818
Score = 38.5 bits (88), Expect = 0.021
Identities = 50/184 (27%), Positives = 71/184 (38%), Gaps = 29/184 (15%)
Query: 343 ERGRPSLYVQRDIVQETQREEDHRREGLHVG-RASTPDWVSE-GPQPGLRRALSSDSILS 400
E+ R L V D + ++D R+ +G R +WV+ G G + + + S+
Sbjct: 486 EQARRPLSVATDNMMLEFYKKDGLRKIQSMGVRVMDTNWVARRGSSAGRKVSCAPPSMQP 545
Query: 401 PAPDARAADPAPEVRKVNRIPPDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATS 460
PAP A A P P P QP SP P L S G P ST ++K
Sbjct: 546 PAPPAELAAPLPS--------PLPEQPLDSPAAPALSPSGLGLQPGPERTSTTKSK---- 593
Query: 461 PKATMSPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQA 520
+SP S G P S++ A + P A G +P +P +P
Sbjct: 594 ---ELSPG--SAQKGSPGSSQGTACAGTQ--PGAQPGA--------QPGASPSPSQPPAD 638
Query: 521 QVPH 524
Q PH
Sbjct: 639 QSPH 642
>gi|48476182 roundabout, axon guidance receptor, homolog 3 [Homo
sapiens]
Length = 1386
Score = 38.1 bits (87), Expect = 0.027
Identities = 52/227 (22%), Positives = 82/227 (36%), Gaps = 29/227 (12%)
Query: 107 PTWALRPEDGEDKEMKTYRLDAGDADPRRLCDLERERWAVIQ----GQAVRKSSTVATLQ 162
P+ L +G ++E++ G ++P C ER + + G + S T
Sbjct: 1090 PSCELSCLEGPEEELE------GSSEPEEWCPPMPERSHLTEPSSSGGCLVTPSRRETPS 1143
Query: 163 GTPDHGD----------PRTPGPPRSTPLEENVVDREQI---DFLAARQQFLSLEQANKG 209
TP +G P P PP P + R + L+ Q L + +A
Sbjct: 1144 PTPSYGQQSTATLTPSPPDPPQPPTDMPHLHQMPRRVPLGPSSPLSVSQPMLGIREARPA 1203
Query: 210 APHSSPARGTPAGTTPGASQAPKAFNKPHLANGHVVPIKPQVKGVVREENKVRAVPTWAS 269
+ PA +P S A A + NG + P P R K +A+P
Sbjct: 1204 GLGAGPAASPHLSPSPAPSTASSAPGRTWQGNGEMTP--PLQGPRARFRKKPKALP---- 1257
Query: 270 VQVVDDPGSLASVESPGTPKETPIEREIRLAQEREADLREQRGLRQA 316
+ + PG L P +E E+R A + RE+ G R+A
Sbjct: 1258 YRRENSPGDLPPPPLPPPEEEASWALELRAAGSMSSLERERSGERKA 1304
>gi|163310749 LIM and calponin homology domains 1 isoform e [Homo
sapiens]
Length = 890
Score = 37.7 bits (86), Expect = 0.035
Identities = 70/319 (21%), Positives = 124/319 (38%), Gaps = 35/319 (10%)
Query: 293 IEREIRLAQER-EADLREQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYV 351
I ++R ++ + DL + R++ + + R + KL ER R S+
Sbjct: 187 INNQLREEDDKWQDDLARWKSRRRSVSQDLIKKEEERKKMEKLLAGEDGTSER-RKSIKT 245
Query: 352 QRDIVQETQREEDHRREGLHVGRASTPDWVSEGP-QPGLRRALSSDSILS----PAPDAR 406
R+IVQE +R E E R+ +EG Q + R S+++L P R
Sbjct: 246 YREIVQEKERRERELHEAYKNARSQEE---AEGILQQYIERFTISEAVLERLEMPKILER 302
Query: 407 AADPAPEVRKVNRIP-PDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATM 465
+ P + P P Y S P+ + + S L T+ + + SP T+
Sbjct: 303 SHSTEPNLSSFLNDPNPMKYLRQQSLPPPKFTATVETTIARASVLDTSMSAGSGSPSKTV 362
Query: 466 SPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHV 525
+P+ + + KP S + + + + V E +E ++ + P V
Sbjct: 363 TPKAVPMLTPKPYSQPKNSQDVLKTFKVDGKVSVNGETVH--------REEEKERECPTV 414
Query: 526 WGWEVAGAPALRLQKSQSSDLLERERESVLRREQ-----EVAEERRNALFPEVFSPT--- 577
APA L KSQ + + R S L +Q E+ ++ N++ E+ + T
Sbjct: 415 -------APAHSLTKSQMFEGVARVHGSPLELKQDNGSIEINIKKPNSVPQELAATTEKT 467
Query: 578 -PDENSDQNSRSSSQASGI 595
P+ D+N S+ I
Sbjct: 468 EPNSQEDKNDGGKSRKGNI 486
>gi|163310747 LIM and calponin homology domains 1 isoform d [Homo
sapiens]
Length = 902
Score = 37.7 bits (86), Expect = 0.035
Identities = 70/319 (21%), Positives = 124/319 (38%), Gaps = 35/319 (10%)
Query: 293 IEREIRLAQER-EADLREQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYV 351
I ++R ++ + DL + R++ + + R + KL ER R S+
Sbjct: 199 INNQLREEDDKWQDDLARWKSRRRSVSQDLIKKEEERKKMEKLLAGEDGTSER-RKSIKT 257
Query: 352 QRDIVQETQREEDHRREGLHVGRASTPDWVSEGP-QPGLRRALSSDSILS----PAPDAR 406
R+IVQE +R E E R+ +EG Q + R S+++L P R
Sbjct: 258 YREIVQEKERRERELHEAYKNARSQEE---AEGILQQYIERFTISEAVLERLEMPKILER 314
Query: 407 AADPAPEVRKVNRIP-PDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATM 465
+ P + P P Y S P+ + + S L T+ + + SP T+
Sbjct: 315 SHSTEPNLSSFLNDPNPMKYLRQQSLPPPKFTATVETTIARASVLDTSMSAGSGSPSKTV 374
Query: 466 SPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHV 525
+P+ + + KP S + + + + V E +E ++ + P V
Sbjct: 375 TPKAVPMLTPKPYSQPKNSQDVLKTFKVDGKVSVNGETVH--------REEEKERECPTV 426
Query: 526 WGWEVAGAPALRLQKSQSSDLLERERESVLRREQ-----EVAEERRNALFPEVFSPT--- 577
APA L KSQ + + R S L +Q E+ ++ N++ E+ + T
Sbjct: 427 -------APAHSLTKSQMFEGVARVHGSPLELKQDNGSIEINIKKPNSVPQELAATTEKT 479
Query: 578 -PDENSDQNSRSSSQASGI 595
P+ D+N S+ I
Sbjct: 480 EPNSQEDKNDGGKSRKGNI 498
>gi|163310745 LIM and calponin homology domains 1 isoform c [Homo
sapiens]
Length = 1056
Score = 37.7 bits (86), Expect = 0.035
Identities = 70/319 (21%), Positives = 124/319 (38%), Gaps = 35/319 (10%)
Query: 293 IEREIRLAQER-EADLREQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYV 351
I ++R ++ + DL + R++ + + R + KL ER R S+
Sbjct: 353 INNQLREEDDKWQDDLARWKSRRRSVSQDLIKKEEERKKMEKLLAGEDGTSER-RKSIKT 411
Query: 352 QRDIVQETQREEDHRREGLHVGRASTPDWVSEGP-QPGLRRALSSDSILS----PAPDAR 406
R+IVQE +R E E R+ +EG Q + R S+++L P R
Sbjct: 412 YREIVQEKERRERELHEAYKNARSQEE---AEGILQQYIERFTISEAVLERLEMPKILER 468
Query: 407 AADPAPEVRKVNRIP-PDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATM 465
+ P + P P Y S P+ + + S L T+ + + SP T+
Sbjct: 469 SHSTEPNLSSFLNDPNPMKYLRQQSLPPPKFTATVETTIARASVLDTSMSAGSGSPSKTV 528
Query: 466 SPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHV 525
+P+ + + KP S + + + + V E +E ++ + P V
Sbjct: 529 TPKAVPMLTPKPYSQPKNSQDVLKTFKVDGKVSVNGETVH--------REEEKERECPTV 580
Query: 526 WGWEVAGAPALRLQKSQSSDLLERERESVLRREQ-----EVAEERRNALFPEVFSPT--- 577
APA L KSQ + + R S L +Q E+ ++ N++ E+ + T
Sbjct: 581 -------APAHSLTKSQMFEGVARVHGSPLELKQDNGSIEINIKKPNSVPQELAATTEKT 633
Query: 578 -PDENSDQNSRSSSQASGI 595
P+ D+N S+ I
Sbjct: 634 EPNSQEDKNDGGKSRKGNI 652
>gi|163310743 LIM and calponin homology domains 1 isoform b [Homo
sapiens]
Length = 1057
Score = 37.7 bits (86), Expect = 0.035
Identities = 70/319 (21%), Positives = 124/319 (38%), Gaps = 35/319 (10%)
Query: 293 IEREIRLAQER-EADLREQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYV 351
I ++R ++ + DL + R++ + + R + KL ER R S+
Sbjct: 353 INNQLREEDDKWQDDLARWKSRRRSVSQDLIKKEEERKKMEKLLAGEDGTSER-RKSIKT 411
Query: 352 QRDIVQETQREEDHRREGLHVGRASTPDWVSEGP-QPGLRRALSSDSILS----PAPDAR 406
R+IVQE +R E E R+ +EG Q + R S+++L P R
Sbjct: 412 YREIVQEKERRERELHEAYKNARSQEE---AEGILQQYIERFTISEAVLERLEMPKILER 468
Query: 407 AADPAPEVRKVNRIP-PDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATM 465
+ P + P P Y S P+ + + S L T+ + + SP T+
Sbjct: 469 SHSTEPNLSSFLNDPNPMKYLRQQSLPPPKFTATVETTIARASVLDTSMSAGSGSPSKTV 528
Query: 466 SPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHV 525
+P+ + + KP S + + + + V E +E ++ + P V
Sbjct: 529 TPKAVPMLTPKPYSQPKNSQDVLKTFKVDGKVSVNGETVH--------REEEKERECPTV 580
Query: 526 WGWEVAGAPALRLQKSQSSDLLERERESVLRREQ-----EVAEERRNALFPEVFSPT--- 577
APA L KSQ + + R S L +Q E+ ++ N++ E+ + T
Sbjct: 581 -------APAHSLTKSQMFEGVARVHGSPLELKQDNGSIEINIKKPNSVPQELAATTEKT 633
Query: 578 -PDENSDQNSRSSSQASGI 595
P+ D+N S+ I
Sbjct: 634 EPNSQEDKNDGGKSRKGNI 652
>gi|163310741 LIM and calponin homology domains 1 isoform a [Homo
sapiens]
Length = 1083
Score = 37.7 bits (86), Expect = 0.035
Identities = 70/319 (21%), Positives = 124/319 (38%), Gaps = 35/319 (10%)
Query: 293 IEREIRLAQER-EADLREQRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYV 351
I ++R ++ + DL + R++ + + R + KL ER R S+
Sbjct: 353 INNQLREEDDKWQDDLARWKSRRRSVSQDLIKKEEERKKMEKLLAGEDGTSER-RKSIKT 411
Query: 352 QRDIVQETQREEDHRREGLHVGRASTPDWVSEGP-QPGLRRALSSDSILS----PAPDAR 406
R+IVQE +R E E R+ +EG Q + R S+++L P R
Sbjct: 412 YREIVQEKERRERELHEAYKNARSQEE---AEGILQQYIERFTISEAVLERLEMPKILER 468
Query: 407 AADPAPEVRKVNRIP-PDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATM 465
+ P + P P Y S P+ + + S L T+ + + SP T+
Sbjct: 469 SHSTEPNLSSFLNDPNPMKYLRQQSLPPPKFTATVETTIARASVLDTSMSAGSGSPSKTV 528
Query: 466 SPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHV 525
+P+ + + KP S + + + + V E +E ++ + P V
Sbjct: 529 TPKAVPMLTPKPYSQPKNSQDVLKTFKVDGKVSVNGETVH--------REEEKERECPTV 580
Query: 526 WGWEVAGAPALRLQKSQSSDLLERERESVLRREQ-----EVAEERRNALFPEVFSPT--- 577
APA L KSQ + + R S L +Q E+ ++ N++ E+ + T
Sbjct: 581 -------APAHSLTKSQMFEGVARVHGSPLELKQDNGSIEINIKKPNSVPQELAATTEKT 633
Query: 578 -PDENSDQNSRSSSQASGI 595
P+ D+N S+ I
Sbjct: 634 EPNSQEDKNDGGKSRKGNI 652
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 37.4 bits (85), Expect = 0.046
Identities = 54/219 (24%), Positives = 77/219 (35%), Gaps = 45/219 (20%)
Query: 376 STPDWVSEGPQPGLRRALSSDSILSPAPDARAADPAPEVRKVNRIPPDAYQPYLSPGTPQ 435
S PDW P+P L L PD+ + P P + PP A P L P +
Sbjct: 984 SPPDWCLSPPRPALSPIL---------PDSPVSLPLPPPLLPSSEPPPA--PPLDPKFMK 1032
Query: 436 LEFSAFGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPRGCPQAN 495
F G+P S S S +P STK+E S+PP P
Sbjct: 1033 DTRPPFTNSGQPES---------------------SRGSLRPPSTKEETSRPP--MPLIT 1069
Query: 496 RGVVRWEYFRLRPLRFRAPDEPQQAQVPHVWGWEVAGAPALRLQKSQSSDLLERERESVL 555
+ + +LRP+R + E Q AP L+ S+ L R + +
Sbjct: 1070 TEAL--QMVQLRPVRKNSGAEAAQLSERTAQEQRTPVAPQYHLK--PSAFLKSRNSTNEM 1125
Query: 556 RREQEVAEERRNALFPEVFSPTPDENSDQNSRSSSQASG 594
E + A + PTP ++S Q S+ G
Sbjct: 1126 ESESQPASVTSSL-------PTPAKSSSQGDHGSAAERG 1157
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 37.0 bits (84), Expect = 0.060
Identities = 50/227 (22%), Positives = 86/227 (37%), Gaps = 21/227 (9%)
Query: 274 DDPGSLASVESPGTPKETPIEREIRLAQEREAD----LREQRGLRQATDHQELVEIP--- 326
D+ S P + P+ R+++ Q+++ + E+ L++ + + L E P
Sbjct: 1685 DETQSTQKQHKPSLGIKKPVRRKLKEKQKQKEEGLQASAEKAELKKGSSEESLGEDPGLA 1744
Query: 327 TRPLLTKLSLITAPR-RERGRPSLYVQRDIVQETQREEDHRREGLHV---GRASTPDWVS 382
PL T + T+P E S+ + +Q+ +E R L + G+ P +
Sbjct: 1745 PEPLPTVKA--TSPLIEETPIGSIKDKVKALQKRVEDEQKGRSKLPIRVKGKEDVPKKTT 1802
Query: 383 EGPQPGLRRALSSDSIL--SPAPDARAADPAPEVRKVNRIPPDAYQPYLSPGTPQLEFSA 440
P P +L S+ SP+P K R PP +SP + + S
Sbjct: 1803 HRPHPAASPSLKSERHAPGSPSPKTERHSTLSSSAKTERHPP------VSPSSKTEKHSP 1856
Query: 441 FGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKP 487
K S A + + T + +SP +E STK E P
Sbjct: 1857 VSPSAKTERHSPASSSSKTEKHSPVSPSTKTERHSPVSSTKTERHPP 1903
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 36.6 bits (83), Expect = 0.078
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Query: 207 NKGAPHSSPARGTPAGTTPGASQAPKAFNKPHL-ANGHVVPIKPQVKGVVREENKVRAVP 265
++G P S A T AGT P + +P + +P G VP P G + + P
Sbjct: 171 SRGIPSSPGAHTTEAGTLPAPTPSPPSLGRPWAPLTGPSVP--PPSSGRASLSSLLGGAP 228
Query: 266 TWASVQVVDDPGSLASVESPGTPKETP 292
W S+Q D G + +P + P
Sbjct: 229 PWGSLQDPDSQGLSPAAAAPSQQLQRP 255
>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 319
Score = 36.2 bits (82), Expect = 0.10
Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 12/126 (9%)
Query: 115 DGEDKEMKTYRLDAGDADPRRLCDLERERWAVIQG-------QAVRKSSTVATLQGTPDH 167
D + K ++ L + P C + RW Q R+ + + P +
Sbjct: 114 DAKLKGVRMSTLQTAETKPTPTCPRRQRRWLRTTPHPPPPTRQGSREMAGAFLVAPRPPY 173
Query: 168 GDPRTPGPPRSTPLEENVVD---REQIDFLAARQQFLSLEQANKGAPHSSPARGTPAGTT 224
R+PG P S P +V+ R + D L+A +++Q P PA+ G
Sbjct: 174 S--RSPGGPESAPTPASVLPELRRGKQDLLSADSGLPAVDQGEVAGPRLQPAQPLRPGAV 231
Query: 225 PGASQA 230
P AS+A
Sbjct: 232 PSASRA 237
>gi|225735627 disco-interacting protein 2A isoform f [Homo sapiens]
Length = 798
Score = 35.8 bits (81), Expect = 0.13
Identities = 36/161 (22%), Positives = 60/161 (37%), Gaps = 5/161 (3%)
Query: 135 RLCDLERERWAVIQGQAVRKSSTVATLQGTPDHGDPRTPGPPRSTPLEENVVDREQIDFL 194
R + +R +V+ +V + T + D G R PG STPL+ + +D +
Sbjct: 111 RKMPMPSKRRSVLVHSSVETYTPPDTSSASEDEGSLRRPGRLTSTPLQSHSSVEPWLDRV 170
Query: 195 AARQQFLSLEQANKGAPHSSPARGTPAGTTPGASQAPKAFNKPHLANGHV-VPIKPQVKG 253
S + P P A TPGA+ A+ H+ VP+ +V
Sbjct: 171 IQGSSTSSSASSTSSHPGGRPTTAPSAAATPGAAATTALAGLE--AHTHIGVPVNSRVSS 228
Query: 254 VVREENKVRAVPTWASVQ--VVDDPGSLASVESPGTPKETP 292
+++ P ++ VDD L V+ P + P
Sbjct: 229 KIQQLLNTLKRPKRPPLKEFFVDDFEELLEVQQPDPNQPKP 269
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 35.8 bits (81), Expect = 0.13
Identities = 42/156 (26%), Positives = 58/156 (37%), Gaps = 15/156 (9%)
Query: 385 PQPGLRRALSSDSILSPAPDAR----AADPAPEVRKVNRIPPDAYQPYLSPGTPQLEFSA 440
P+P ++SS P A P+PE +K + P++ + LS PQ +
Sbjct: 174 PEPSKPASVSSPEPPKSVPVCESQKLAPVPSPEPQKPAPVSPESVKATLSNPKPQKQSHF 233
Query: 441 FGAFGKPSSLSTAEAKAATSPKA-TMSPRHLSESSGKPLSTKQEASKP-PRGCPQANRGV 498
G PS+ S A SP+ SP ES +T E KP P P+
Sbjct: 234 PETLGPPSASSPESPVLAASPEPWGPSPAASPESRKSARTTSPEPRKPSPSESPEP---- 289
Query: 499 VRWEYFRLRPLRFRAPDEPQQAQVPHVWGWEVAGAP 534
W+ F P P P A P W G+P
Sbjct: 290 --WKPF---PAVSPEPRRPAPAVSPGSWKPGPPGSP 320
Score = 30.0 bits (66), Expect = 7.3
Identities = 63/281 (22%), Positives = 106/281 (37%), Gaps = 43/281 (15%)
Query: 373 GRASTPDWVSEGPQPGLRRALSSDSILSPAPDARAADPA----PEVRKVNR-IPPDAYQP 427
G +P+ S P LR+ S + +PD R PA PE +K +R PD ++
Sbjct: 423 GPPLSPEIRSPAGSPELRKPSGSPDLWKLSPDQRKTSPASLDFPESQKSSRGGSPDLWKS 482
Query: 428 --YLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSP--KATMSPRHLSESSGKPLSTKQE 483
++ P P F KP +E+ A S K +S + KP +
Sbjct: 483 SFFIEPQKP-----VFPETRKPGPSGPSESPKAASDIWKPVLS---IDTEPRKPALFPEP 534
Query: 484 ASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHVWGWEVAGAPALRLQKSQS 543
A P P+A + + F P+ P+ A A+ L
Sbjct: 535 AKTAPPASPEARKRAL----FPEPRKHALFPELPKSALFSE-------SQKAVELGDELQ 583
Query: 544 SDLLERERESVLRREQEVAEERR---NALFPEVFSPTPD--ENSDQNSRSSS------QA 592
D ++ ++ +L +E+ +A ++ + LFP D E+SD SS A
Sbjct: 584 IDAIDDQKCDILVQEELLASPKKLLEDTLFPSSKKLKKDNQESSDAELSSSEYIKTDLDA 643
Query: 593 SGITGSYSVSESPFFSPIHLHSNVAWTVEDPVDSAPPGQRK 633
I G S S+ + + S + ++ E+ +D P Q +
Sbjct: 644 MDIKGQESSSDQ---EQVDVES-IDFSKENKMDMTSPEQSR 680
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 35.8 bits (81), Expect = 0.13
Identities = 48/190 (25%), Positives = 75/190 (39%), Gaps = 20/190 (10%)
Query: 316 ATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYVQRDIVQETQREEDHRRE------- 368
+ D +++ P+ + S AP + R + D V+E +R+ D +
Sbjct: 725 SVDSEDMYADLASPVSSASSRSPAPAQTRKEKGKSKKEDGVKEEKRKRDSSTQPPKSAKP 784
Query: 369 ---GLHVGRASTPDWVSEG-PQPGLRRALSSD--SILSPAPDARAADPAPEVRKVNRIPP 422
G + STP G PQ G A ++L+ A D + K + PP
Sbjct: 785 PAGGKSSQQPSTPQQAPPGQPQQGTFVAHKEIKLTLLNKAADKGSRKRYEPSDKDRQSPP 844
Query: 423 DAYQPYLSPGTPQLEFSAFGAFG--KPSSLSTAEAKAATSP---KATMSPRHLSESSGKP 477
A +P SP + + G G KP +KA +P K +SP+ S+SS K
Sbjct: 845 PAKRPNTSPDRGSRDRKSGGRLGSPKPERQRGQNSKAPAAPADRKRQLSPQ--SKSSSKV 902
Query: 478 LSTKQEASKP 487
S +AS P
Sbjct: 903 TSVPGKASDP 912
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 35.4 bits (80), Expect = 0.17
Identities = 44/177 (24%), Positives = 64/177 (36%), Gaps = 48/177 (27%)
Query: 472 ESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHVWGWEVA 531
E+ L +++A PPR P WE +RL FRA + +Q Q
Sbjct: 1086 ETQSDLLGARKKAFPPPRPPPP------NWEKYRL----FRAAQQQKQQQQQQ------- 1128
Query: 532 GAPALRLQKSQSSDLLERERESVLRREQEVAEERRNALFPEVFSP--------TPDENSD 583
++ + + E E E E+E AEE L P+ FS P+E +
Sbjct: 1129 -------KQQEEEEEEEEEEEEEEEEEEEEAEEEEEELPPQYFSSETSGSCALNPEEVLE 1181
Query: 584 Q----------NSRSSSQA-SGITGSYSVSESPFFSPIHLHSNVAWTVEDPVDSAPP 629
Q SR SQ+ S+++ S F PI H P + PP
Sbjct: 1182 QPQPLSFGHLEGSRQGSQSVPAEQESFALHSSDFLPPIRGHLG-----SQPEQAQPP 1233
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 35.4 bits (80), Expect = 0.17
Identities = 76/344 (22%), Positives = 122/344 (35%), Gaps = 69/344 (20%)
Query: 250 QVKGVVREENKVRAVPTWASVQVVDDPGSLASVESPGTPKETPIEREIRLAQEREADLRE 309
QV+ V EE+ R VP A V P ++ P K IE+ R +E + + +
Sbjct: 9151 QVQKEVYEESHERKVP--AKVPEKKAPPPPKVIKKPVIEK---IEKTSRRMEEEKVQVTK 9205
Query: 310 ----------QRGLRQATDHQELVEIPTRPLLTKLSLITAPRRERGRPSLYVQRDIVQET 359
Q+ R +E++E+ + TK +I+ + + V E
Sbjct: 9206 VPEVSKKIVPQKPSRTPVQ-EEVIEVKVPAVHTKKMVISEEKMFFASHTEEEVSVTVPEV 9264
Query: 360 QREEDHRREGLHVG---RASTPDWVSEGPQPGLRRALSSDSILSPAPDARAADPAPEVRK 416
Q+E E +HV R P V E P+ PAP+ A P P+
Sbjct: 9265 QKEIV-TEEKIHVAISKRVEPPPKVPELPE-------------KPAPEEVAPVPIPK--- 9307
Query: 417 VNRIPPDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKAATSPKATMSPRHLSESSGK 476
++ P A P P++ KP + E A PK P+
Sbjct: 9308 --KVEPPA------PKVPEVPKKPVPEEKKPVPVPKKEP--AAPPKVPEVPKKPVPEEKI 9357
Query: 477 PLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRFRAPDEPQQAQVPHVWGWEVAGAPAL 536
P+ ++ PP P+ +GVV E + R +P P ++P
Sbjct: 9358 PVPVAKKKEAPPAKVPEVQKGVVTEEKITIVTQREESP-PPAVPEIP------------- 9403
Query: 537 RLQKSQSSDLLERERESVLRREQEVAEERRNALFPEVFSPTPDE 580
+ ER+ V R+E+EV + P+ P P+E
Sbjct: 9404 -------KKKVPEERKPVPRKEEEVPPPPKVPALPK--KPVPEE 9438
Score = 30.4 bits (67), Expect = 5.6
Identities = 73/367 (19%), Positives = 121/367 (32%), Gaps = 38/367 (10%)
Query: 220 PAGTTPGASQAPKAFNKPHLANGHVVPIKPQVKGVVREENKVRAVPTWASVQVVDDPGSL 279
P P P P VV KP++ V E VP VV
Sbjct: 10685 PEPAAPPQVTVPPKKPVPEKKAPAVVAKKPELPPVKVPEVPKEVVPEKKVPLVVPKKPEA 10744
Query: 280 ASVESPGTPKETPIEREIRLAQEREADLREQRGLRQATDHQELVEIPTRPLLTKLSLITA 339
+ P PKE E+++ + ++ E ++ E+P +P+L + +
Sbjct: 10745 PPAKVPEVPKEVVPEKKVAVPKKPE------------VPPAKVPEVPKKPVLEEKPAVPV 10792
Query: 340 PRR-ERGRPSLYVQRDIVQETQREEDHRREGLHVGRASTPDWVSEGPQPGLRRALSSDSI 398
P R E P +Y + + + + + + V P+ V P + + +
Sbjct: 10793 PERAESPPPEVYEEPEEIAPEEEIAPEEEKPVPVAEEEEPE-VPPPAVPEEPKKIIPEKK 10851
Query: 399 LSPAPDARAADP-APEVRKVNRIPPDAYQPYLSPGTPQLEFSAFGAFGKPSSLSTAEAKA 457
+ A P PE KV P +P P P E F + KA
Sbjct: 10852 VPVIKKPEAPPPKEPEPEKVIEKPKLKPRPPPPPPAPPKEDVKEKIF---------QLKA 10902
Query: 458 ATSPKATMSPRHLSESSGKPLST----KQEASKPPRGCPQANRGVVRWEYFRLRPLRFRA 513
K P+ + PL K+ P P+ VV R RP
Sbjct: 10903 IPKKKVPEKPQVPEKVELTPLKVPGGEKKVRKLLPERKPEPKEEVVLKSVLRKRPEEEEP 10962
Query: 514 PDEPQQAQVPHVWGWEVAGAPALRLQKSQSSDLLERERESVLRREQEVAEERR-NALFPE 572
EP++ E PA+ + + E E +V +RE+++ E + + P
Sbjct: 10963 KVEPKKL--------EKVKKPAVP-EPPPPKPVEEVEVPTVTKRERKIPEPTKVPEIKPA 11013
Query: 573 VFSPTPD 579
+ P P+
Sbjct: 11014 IPLPAPE 11020
>gi|22547204 hairless protein isoform a [Homo sapiens]
Length = 1189
Score = 35.4 bits (80), Expect = 0.17
Identities = 54/189 (28%), Positives = 72/189 (38%), Gaps = 19/189 (10%)
Query: 343 ERGRPSLYVQRDIVQETQREEDHRREGLHVGRASTPDWVS-EGPQPGLRRALSS------ 395
E RPSL+ QRD R+++ L +G+ T W S PGL L +
Sbjct: 242 EAERPSLH-QRDGEMGAGRQQNPCP--LFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPG 298
Query: 396 DSILSP--APDARAADPAPEVRKVNRIPPDAYQPYLSPGTPQLEFSAFGAFGKPSSLS-- 451
D L P A P+PE R +Y P G G G S S
Sbjct: 299 DGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEP 358
Query: 452 TAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRF 511
+ E A+ P+A P H ++ L+ E + PRGCP+ V RLR L+
Sbjct: 359 SEEVNKASGPRAC-PPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVA----RLRALKR 413
Query: 512 RAPDEPQQA 520
E Q A
Sbjct: 414 AGSPEVQGA 422
>gi|22547207 hairless protein isoform b [Homo sapiens]
Length = 1134
Score = 35.4 bits (80), Expect = 0.17
Identities = 54/189 (28%), Positives = 72/189 (38%), Gaps = 19/189 (10%)
Query: 343 ERGRPSLYVQRDIVQETQREEDHRREGLHVGRASTPDWVS-EGPQPGLRRALSS------ 395
E RPSL+ QRD R+++ L +G+ T W S PGL L +
Sbjct: 242 EAERPSLH-QRDGEMGAGRQQNPCP--LFLGQPDTVPWTSWPACPPGLVHTLGNVWAGPG 298
Query: 396 DSILSP--APDARAADPAPEVRKVNRIPPDAYQPYLSPGTPQLEFSAFGAFGKPSSLS-- 451
D L P A P+PE R +Y P G G G S S
Sbjct: 299 DGNLGYQLGPPATPRCPSPEPPVTQRGCCSSYPPTKGGGLGPCGKCQEGLEGGASGASEP 358
Query: 452 TAEAKAATSPKATMSPRHLSESSGKPLSTKQEASKPPRGCPQANRGVVRWEYFRLRPLRF 511
+ E A+ P+A P H ++ L+ E + PRGCP+ V RLR L+
Sbjct: 359 SEEVNKASGPRAC-PPSHHTKLKKTWLTRHSEQFECPRGCPEVEERPVA----RLRALKR 413
Query: 512 RAPDEPQQA 520
E Q A
Sbjct: 414 AGSPEVQGA 422
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,561,810
Number of Sequences: 37866
Number of extensions: 1737989
Number of successful extensions: 6531
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 193
Number of HSP's that attempted gapping in prelim test: 6231
Number of HSP's gapped (non-prelim): 525
length of query: 679
length of database: 18,247,518
effective HSP length: 109
effective length of query: 570
effective length of database: 14,120,124
effective search space: 8048470680
effective search space used: 8048470680
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.