Guide to the Human Genome
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Name: AKAP2 Sequence: fasta or formatted (948aa) NCBI GI: 51873058
Description:

A kinase (PRKA) anchor protein 2 isoform 1

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [859aa] A kinase (PRKA) anchor protein 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         81           4
 C cysteine            0.8          8           2
 D aspartate           5.5         52           3
 E glutamate          10.8        102           3
 F phenylalanine       2.0         19           1
 G glycine             5.4         51           2
 H histidine           1.8         17           2
 I isoleucine          2.4         23           1
 K lysine              5.6         53           2
 L leucine             7.6         72           3
 M methionine          1.6         15           1
 N asparagine          3.0         28           1
 P proline             9.7         92           3
 Q glutamine           6.3         60           6
 R arginine            6.1         58           2
 S serine             11.0        104           2
 T threonine           5.3         50           2
 V valine              4.3         41           2
 W tryptophan          0.7          7           2
 Y tyrosine            1.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   A kinase (PRKA) anchor protein 2 isoform 1 
PALM2-AKAP2           0.940   PALM2-AKAP2 protein isoform 2 
PALM2-AKAP2           0.935   PALM2-AKAP2 protein isoform 1 
AKAP2                 0.898   A kinase (PRKA) anchor protein 2 isoform 2 
BRD4                  0.014   bromodomain-containing protein 4 isoform long 
ADD1                  0.013   adducin 1 (alpha) isoform b 
PSPC1                 0.013   paraspeckle protein 1 
ZNF853                0.012   zinc finger protein 853 
MINK1                 0.012   misshapen/NIK-related kinase isoform 4 
PCLO                  0.012   piccolo isoform 2 
PCLO                  0.012   piccolo isoform 1 
ADD1                  0.012   adducin 1 (alpha) isoform a 
TNIK                  0.011   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.011   TRAF2 and NCK interacting kinase isoform 5 
TNIK                  0.011   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.011   TRAF2 and NCK interacting kinase isoform 1 
LOC283685             0.011   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MAP7D1                0.011   MAP7 domain containing 1 
GIGYF2                0.011   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.011   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.011   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.011   GRB10 interacting GYF protein 2 isoform b 
AKAP12                0.011   A kinase (PRKA) anchor protein 12 isoform 1 
AKAP12                0.011   A kinase (PRKA) anchor protein 12 isoform 2 
NEFH                  0.011   neurofilament, heavy polypeptide 200kDa 
CIC                   0.011   capicua homolog 
WDR87                 0.011   NYD-SP11 protein 
INCENP                0.011   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.011   inner centromere protein antigens 135/155kDa isofor...
SOX13                 0.011   SRY-box 13 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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