APLF 24474

Name: APLF	Sequence: fasta or formatted (511aa)		NCBI GI: 27734905
Description: aprataxin and PNKP like factor		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.7 19 1 C cysteine 2.3 12 1 D aspartate 6.5 33 2 E glutamate 10.0 51 3 F phenylalanine 2.0 10 1 G glycine 6.7 34 2 H histidine 2.5 13 1 I isoleucine 4.7 24 1 K lysine 6.5 33 1 L leucine 7.6 39 2 M methionine 1.8 9 1 N asparagine 6.5 33 2 P proline 6.3 32 1 Q glutamine 5.7 29 2 R arginine 4.7 24 2 S serine 10.2 52 3 T threonine 5.7 29 2 V valine 4.1 21 1 W tryptophan 0.6 3 1 Y tyrosine 2.2 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 aprataxin and PNKP like factor SFRS2IP 0.017 splicing factor, arginine/serine-rich 2, interactin... DSPP 0.015 dentin sialophosphoprotein preproprotein BOD1L 0.015 biorientation of chromosomes in cell division 1-like... USP6 0.015 ubiquitin specific protease 6 LEO1 0.015 Leo1, Paf1/RNA polymerase II complex component, homo... HTATSF1 0.015 HIV-1 Tat specific factor 1 HTATSF1 0.015 HIV-1 Tat specific factor 1 EIF3CL 0.014 eukaryotic translation initiation factor 3, subunit... MYT1L 0.014 myelin transcription factor 1-like EIF3C 0.014 eukaryotic translation initiation factor 3, subunit ... EIF3C 0.014 eukaryotic translation initiation factor 3, subunit C... GNL2 0.014 guanine nucleotide binding protein-like 2 (nucleolar)... ATRX 0.014 transcriptional regulator ATRX isoform 2 ATRX 0.014 transcriptional regulator ATRX isoform 1 CHD1 0.013 chromodomain helicase DNA binding protein 1 DMP1 0.012 dentin matrix acidic phosphoprotein 1 isoform 1 precu... DMP1 0.012 dentin matrix acidic phosphoprotein 1 isoform 2 pre... TMX4 0.012 thioredoxin-related transmembrane protein 4 NCL 0.012 nucleolin LOC646817 0.012 PREDICTED: similar to SET translocation LOC646817 0.012 PREDICTED: similar to SET translocation LOC646817 0.012 PREDICTED: similar to SET translocation SET 0.012 SET translocation (myeloid leukemia-associated) iso... SET 0.012 SET translocation (myeloid leukemia-associated) iso... ANKS1B 0.012 cajalin 2 isoform a ACIN1 0.012 apoptotic chromatin condensation inducer 1 APBA1 0.012 amyloid beta A4 precursor protein-binding, family A,... C5orf41 0.012 luman-recruiting factor NAP1L1 0.011 nucleosome assembly protein 1-like 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.