EIF3C 28603

Name: EIF3C	Sequence: fasta or formatted (913aa)		NCBI GI: 4503525
Description: eukaryotic translation initiation factor 3, subunit C		Referenced in: Translation Factors
Other entries for this name: alt mRNA [913aa] eukaryotic translation initiation factor 3, subunit C
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.1 56 2 C cysteine 1.3 12 1 D aspartate 6.9 63 2 E glutamate 11.2 102 4 F phenylalanine 2.6 24 2 G glycine 5.0 46 2 H histidine 2.7 25 2 I isoleucine 5.0 46 2 K lysine 8.3 76 3 L leucine 9.5 87 3 M methionine 3.1 28 1 N asparagine 4.1 37 2 P proline 2.8 26 2 Q glutamine 4.9 45 3 R arginine 6.5 59 3 S serine 6.5 59 2 T threonine 4.6 42 2 V valine 4.6 42 2 W tryptophan 0.8 7 1 Y tyrosine 3.4 31 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 eukaryotic translation initiation factor 3, subunit C... EIF3C 1.000 eukaryotic translation initiation factor 3, subunit ... EIF3CL 0.997 eukaryotic translation initiation factor 3, subunit... NCL 0.027 nucleolin ATRX 0.022 transcriptional regulator ATRX isoform 2 ATRX 0.022 transcriptional regulator ATRX isoform 1 FAM133A 0.021 hypothetical protein LOC286499 TOP1 0.021 DNA topoisomerase I HTATSF1 0.020 HIV-1 Tat specific factor 1 HTATSF1 0.020 HIV-1 Tat specific factor 1 FAM133B 0.020 hypothetical protein LOC257415 isoform 2 FAM133B 0.020 hypothetical protein LOC257415 isoform 1 IWS1 0.018 IWS1 homolog CYLC1 0.018 cylicin, basic protein of sperm head cytoskeleton 1... ANP32B 0.018 acidic (leucine-rich) nuclear phosphoprotein 32 famil... WDR87 0.018 NYD-SP11 protein ATAD2 0.017 ATPase family, AAA domain containing 2 AP3B1 0.017 adaptor-related protein complex 3, beta 1 subunit [H... UBTF 0.017 upstream binding transcription factor, RNA polymera... UBTF 0.017 upstream binding transcription factor, RNA polymera... UBTF 0.017 upstream binding transcription factor, RNA polymerase... NSBP1 0.017 nucleosomal binding protein 1 KIF21A 0.017 kinesin family member 21A RTF1 0.016 Paf1/RNA polymerase II complex component MPHOSPH10 0.016 M-phase phosphoprotein 10 EIF5B 0.016 eukaryotic translation initiation factor 5B CYLC2 0.016 cylicin 2 PPP1R15A 0.016 protein phosphatase 1, regulatory subunit 15A [Homo... DEK 0.016 DEK oncogene isoform 2 DEK 0.016 DEK oncogene isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.