Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TMX4 Sequence: fasta or formatted (349aa) NCBI GI: 40254947
Description:

thioredoxin-related transmembrane protein 4

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         31           2
 C cysteine            1.7          6           1
 D aspartate           5.7         20           2
 E glutamate          14.3         50           6
 F phenylalanine       4.3         15           2
 G glycine             7.4         26           2
 H histidine           1.7          6           1
 I isoleucine          3.7         13           1
 K lysine              3.7         13           2
 L leucine             8.0         28           2
 M methionine          2.0          7           1
 N asparagine          2.6          9           1
 P proline             5.7         20           2
 Q glutamine           4.6         16           2
 R arginine            4.3         15           2
 S serine              6.6         23           1
 T threonine           4.0         14           2
 V valine              6.3         22           2
 W tryptophan          2.6          9           1
 Y tyrosine            1.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin-related transmembrane protein 4 
TMX1                  0.286   thioredoxin domain containing 1 
MYST3                 0.046   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.046   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.046   MYST histone acetyltransferase (monocytic leukemia)...
RPGR                  0.043   retinitis pigmentosa GTPase regulator isoform C [Hom...
MYT1                  0.042   myelin transcription factor 1 
LOC647020             0.041   PREDICTED: similar to acidic (leucine-rich) nuclear...
LOC647020             0.041   PREDICTED: similar to acidic (leucine-rich) nuclear...
TXNDC5                0.041   thioredoxin domain containing 5 isoform 1 precursor ...
TXNDC5                0.041   thioredoxin domain containing 5 isoform 3 
ANP32B                0.041   acidic (leucine-rich) nuclear phosphoprotein 32 famil...
WDR87                 0.039   NYD-SP11 protein 
CDC2L2                0.039   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.039   cell division cycle 2-like 2 isoform 1 
NEFL                  0.039   neurofilament, light polypeptide 68kDa 
CDC2L1                0.039   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.039   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.039   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.039   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.039   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.039   cell division cycle 2-like 1 (PITSLRE proteins) isof...
NCL                   0.039   nucleolin 
PELP1                 0.039   proline, glutamic acid and leucine rich protein 1 [...
YTHDC1                0.039   splicing factor YT521-B isoform 2 
YTHDC1                0.039   splicing factor YT521-B isoform 1 
TRIM44                0.038   DIPB protein 
PAF1                  0.038   Paf1, RNA polymerase II associated factor, homolog [...
C1orf107              0.038   digestive-organ expansion factor homolog 
ANP32E                0.038   acidic (leucine-rich) nuclear phosphoprotein 32 fami...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press