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Search of human proteins with 27659730
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens]
(188 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens] 387 e-108
gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens] 311 3e-85
gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo ... 309 1e-84
gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo sap... 309 1e-84
gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens] 305 1e-83
gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo sap... 299 1e-81
gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo sapi... 294 3e-80
gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo sa... 294 3e-80
gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo sap... 293 5e-80
gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens] 291 2e-79
gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo sap... 273 5e-74
gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo sap... 245 2e-65
gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo sap... 234 3e-62
gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo sap... 164 5e-41
gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo sa... 164 5e-41
gi|239752309 PREDICTED: hypothetical protein XP_002348195 [Homo ... 105 2e-23
gi|147905620 PR domain containing 9 [Homo sapiens] 79 3e-15
gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens] 75 3e-14
gi|48717241 zinc finger protein 425 [Homo sapiens] 39 0.003
gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo ... 38 0.006
gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo ... 38 0.006
gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo ... 38 0.006
gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo ... 38 0.006
gi|118918411 zinc finger protein 777 [Homo sapiens] 38 0.006
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 36 0.022
gi|20304115 zinc finger protein 551 [Homo sapiens] 35 0.029
gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens] 35 0.038
gi|239747195 PREDICTED: similar to PITSLRE protein kinase beta S... 35 0.038
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 34 0.085
gi|25777704 zinc finger 398 isoform a [Homo sapiens] 34 0.085
>gi|27659730 synovial sarcoma, X breakpoint 6 [Homo sapiens]
Length = 188
Score = 387 bits (993), Expect = e-108
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK
Sbjct: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG
Sbjct: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI
Sbjct: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDK 188
SDPEEDDK
Sbjct: 181 SDPEEDDK 188
>gi|5032121 synovial sarcoma, X breakpoint 1 [Homo sapiens]
Length = 188
Score = 311 bits (796), Expect = 3e-85
Identities = 153/188 (81%), Positives = 168/188 (89%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDD FAKRPRDDAKASEKRSKAFDDIA YFSK+EW+KMK+SEKIS V+MKR Y+AMTK
Sbjct: 1 MNGDDTFAKRPRDDAKASEKRSKAFDDIATYFSKKEWKKMKYSEKISYVYMKRNYKAMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF VTL FM NK+ATD Q ND DND NR +VE PQMTFGRL RIIPKIMP+KPAE+
Sbjct: 61 LGFKVTLPPFMCNKQATDFQGNDFDNDHNRRIQVEHPQMTFGRLHRIIPKIMPKKPAEDE 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
+DSKGV EASGPQNDGK+L PPGKA+ SEKI++RSGPKRGKHAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSKGVSEASGPQNDGKQLHPPGKANISEKINKRSGPKRGKHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDK 188
SDPEEDD+
Sbjct: 181 SDPEEDDE 188
>gi|239746831 PREDICTED: synovial sarcoma, X breakpoint 2B [Homo
sapiens]
Length = 188
Score = 309 bits (791), Expect = 1e-84
Identities = 152/188 (80%), Positives = 164/188 (87%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAFA+RP A+ EK KAFDDIAKYFSKEEWEKMK SEKI V+MKRKYEAMTK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF TL FM NKRA D Q ND DND NRGN+VERPQMTFGRLQ I PKIMP+KPAEEG
Sbjct: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
+DS+ VPEASGPQNDGK+LCPPGK ++SEKIHERSGPKRG+HAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDK 188
SDPEEDD+
Sbjct: 181 SDPEEDDE 188
>gi|28559006 synovial sarcoma, X breakpoint 2 isoform b [Homo
sapiens]
Length = 188
Score = 309 bits (791), Expect = 1e-84
Identities = 152/188 (80%), Positives = 164/188 (87%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAFA+RP A+ EK KAFDDIAKYFSKEEWEKMK SEKI V+MKRKYEAMTK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF TL FM NKRA D Q ND DND NRGN+VERPQMTFGRLQ I PKIMP+KPAEEG
Sbjct: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
+DS+ VPEASGPQNDGK+LCPPGK ++SEKIHERSGPKRG+HAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGPKRGEHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDK 188
SDPEEDD+
Sbjct: 181 SDPEEDDE 188
>gi|27659732 synovial sarcoma, X breakpoint 7 [Homo sapiens]
Length = 188
Score = 305 bits (782), Expect = 1e-83
Identities = 150/188 (79%), Positives = 163/188 (86%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAFA+RPR A+ EK K+FDDIAKYFSK+EWEKMK EKIS V+MKRKYEAMTK
Sbjct: 1 MNGDDAFARRPRAGAQIPEKIQKSFDDIAKYFSKKEWEKMKSLEKISYVYMKRKYEAMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF TL FM N ATD Q ND DNDRN+GN+VERPQMTF RLQRI PKIMP+KPAEEG
Sbjct: 61 LGFKATLPPFMHNTGATDLQGNDFDNDRNQGNQVERPQMTFCRLQRIFPKIMPKKPAEEG 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
+DSKGVPEASG QNDGK LCPPGK S+SEKI++ SGPKRGKHAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSKGVPEASGSQNDGKHLCPPGKPSTSEKINKTSGPKRGKHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDK 188
SDPEEDD+
Sbjct: 181 SDPEEDDE 188
>gi|10337601 synovial sarcoma, X breakpoint 3 isoform a [Homo
sapiens]
Length = 188
Score = 299 bits (765), Expect = 1e-81
Identities = 147/188 (78%), Positives = 160/188 (85%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDD FA+RP A+ EK KAFDDIAKYFSKEEWEKMK SEKI V+MKRKYEAMTK
Sbjct: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF L FMRNKR TD Q ND DND NRGN+V+RPQMTFGRLQ I PKIMP+KPAEEG
Sbjct: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
+ SK VPEASGPQNDGK+LCPPGK ++SEKI+ SGPKRG+HAWTHRLRERKQLVIYEEI
Sbjct: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISGPKRGEHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDK 188
SDPEEDD+
Sbjct: 181 SDPEEDDE 188
>gi|5032123 synovial sarcoma, X breakpoint 4 isoform a [Homo
sapiens]
Length = 188
Score = 294 bits (752), Expect = 3e-80
Identities = 144/188 (76%), Positives = 158/188 (84%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAFA+RPRDDA+ SEK KAFDDIAKYFSK+EWEKMK SEKI V+MK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF VTL FMR+KRA D ND NDRN N+VERPQMTFG LQRI PKIMP+KPAEE
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
+ K VPEASGPQNDGK+LCPPG S+ EKI++ SGPKRGKHAWTHRLRERKQLV+YEEI
Sbjct: 121 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEI 180
Query: 181 SDPEEDDK 188
SDPEEDD+
Sbjct: 181 SDPEEDDE 188
>gi|83367081 synovial sarcoma, X breakpoint 4B isoform a [Homo
sapiens]
Length = 188
Score = 294 bits (752), Expect = 3e-80
Identities = 144/188 (76%), Positives = 158/188 (84%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAFA+RPRDDA+ SEK KAFDDIAKYFSK+EWEKMK SEKI V+MK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF VTL FMR+KRA D ND NDRN N+VERPQMTFG LQRI PKIMP+KPAEE
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPKIMPKKPAEEE 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
+ K VPEASGPQNDGK+LCPPG S+ EKI++ SGPKRGKHAWTHRLRERKQLV+YEEI
Sbjct: 121 NGLKEVPEASGPQNDGKQLCPPGNPSTLEKINKTSGPKRGKHAWTHRLRERKQLVVYEEI 180
Query: 181 SDPEEDDK 188
SDPEEDD+
Sbjct: 181 SDPEEDDE 188
>gi|28559017 synovial sarcoma, X breakpoint 5 isoform b [Homo
sapiens]
Length = 188
Score = 293 bits (751), Expect = 5e-80
Identities = 142/188 (75%), Positives = 160/188 (85%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAF +RPR ++ EK KAFDDIAKYFS++EWEKMK SEKI V+MKRKYEAMTK
Sbjct: 1 MNGDDAFVRRPRVGSQIPEKMQKAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF TL FMRNKR D Q ND DND NRGN+VE PQMTFGRLQ I PKI PEKPAEEG
Sbjct: 61 LGFKATLPPFMRNKRVADFQGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEG 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
+DSKGVPEASGPQN+GK+L P GK ++SEK+++ SGPKRGKHAWTHR+RERKQLVIYEEI
Sbjct: 121 NDSKGVPEASGPQNNGKQLRPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEI 180
Query: 181 SDPEEDDK 188
SDP+EDD+
Sbjct: 181 SDPQEDDE 188
>gi|27902281 synovial sarcoma, X breakpoint 9 [Homo sapiens]
Length = 188
Score = 291 bits (746), Expect = 2e-79
Identities = 145/188 (77%), Positives = 159/188 (84%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAFA+RPR ++ EK KAFDDIAKYFSK+EWEKMK SEKI V+MKRKYEAMTK
Sbjct: 1 MNGDDAFARRPRAGSQIPEKIQKAFDDIAKYFSKKEWEKMKSSEKIIYVYMKRKYEAMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF TL FM N ATD Q ND DNDRN N+VER QMTFGRLQ I PKIMP+KPAE G
Sbjct: 61 LGFKATLPPFMCNTGATDLQGNDFDNDRNHRNQVERSQMTFGRLQGIFPKIMPKKPAEVG 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEI 180
+DSK VPEASG QNDGK+LCPPGK ++SEKI++ SGPKRGKHAWTHRLRERKQLVIYEEI
Sbjct: 121 NDSKEVPEASGLQNDGKQLCPPGKPTTSEKINKASGPKRGKHAWTHRLRERKQLVIYEEI 180
Query: 181 SDPEEDDK 188
SDPEEDD+
Sbjct: 181 SDPEEDDE 188
>gi|28559015 synovial sarcoma, X breakpoint 5 isoform a [Homo
sapiens]
Length = 229
Score = 273 bits (699), Expect = 5e-74
Identities = 142/229 (62%), Positives = 160/229 (69%), Gaps = 41/229 (17%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSK------------------------------------- 23
MNGDDAF +RPR ++ EK K
Sbjct: 1 MNGDDAFVRRPRVGSQIPEKMQKHPWRQVCDRGIHLVNLSPFWKVGREPASSIKALLCGR 60
Query: 24 ----AFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTKLGFNVTLSLFMRNKRATDS 79
AFDDIAKYFS++EWEKMK SEKI V+MKRKYEAMTKLGF TL FMRNKR D
Sbjct: 61 GEARAFDDIAKYFSEKEWEKMKASEKIIYVYMKRKYEAMTKLGFKATLPPFMRNKRVADF 120
Query: 80 QRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEGSDSKGVPEASGPQNDGKKL 139
Q ND DND NRGN+VE PQMTFGRLQ I PKI PEKPAEEG+DSKGVPEASGPQN+GK+L
Sbjct: 121 QGNDFDNDPNRGNQVEHPQMTFGRLQGIFPKITPEKPAEEGNDSKGVPEASGPQNNGKQL 180
Query: 140 CPPGKASSSEKIHERSGPKRGKHAWTHRLRERKQLVIYEEISDPEEDDK 188
P GK ++SEK+++ SGPKRGKHAWTHR+RERKQLVIYEEISDP+EDD+
Sbjct: 181 RPSGKLNTSEKVNKTSGPKRGKHAWTHRVRERKQLVIYEEISDPQEDDE 229
>gi|27659724 synovial sarcoma, X breakpoint 2 isoform a [Homo
sapiens]
Length = 223
Score = 245 bits (625), Expect = 2e-65
Identities = 122/161 (75%), Positives = 134/161 (83%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAFA+RP A+ EK KAFDDIAKYFSKEEWEKMK SEKI V+MKRKYEAMTK
Sbjct: 1 MNGDDAFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKASEKIFYVYMKRKYEAMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF TL FM NKRA D Q ND DND NRGN+VERPQMTFGRLQ I PKIMP+KPAEEG
Sbjct: 61 LGFKATLPPFMCNKRAEDFQGNDLDNDPNRGNQVERPQMTFGRLQGISPKIMPKKPAEEG 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGK 161
+DS+ VPEASGPQNDGK+LCPPGK ++SEKIHERSG + +
Sbjct: 121 NDSEEVPEASGPQNDGKELCPPGKPTTSEKIHERSGNREAQ 161
>gi|28559009 synovial sarcoma, X breakpoint 3 isoform b [Homo
sapiens]
Length = 170
Score = 234 bits (598), Expect = 3e-62
Identities = 117/156 (75%), Positives = 128/156 (82%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDD FA+RP A+ EK KAFDDIAKYFSKEEWEKMK SEKI V+MKRKYEAMTK
Sbjct: 1 MNGDDTFARRPTVGAQIPEKIQKAFDDIAKYFSKEEWEKMKVSEKIVYVYMKRKYEAMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEG 120
LGF L FMRNKR TD Q ND DND NRGN+V+RPQMTFGRLQ I PKIMP+KPAEEG
Sbjct: 61 LGFKAILPSFMRNKRVTDFQGNDFDNDPNRGNQVQRPQMTFGRLQGIFPKIMPKKPAEEG 120
Query: 121 SDSKGVPEASGPQNDGKKLCPPGKASSSEKIHERSG 156
+ SK VPEASGPQNDGK+LCPPGK ++SEKI+ SG
Sbjct: 121 NVSKEVPEASGPQNDGKQLCPPGKPTTSEKINMISG 156
>gi|28559013 synovial sarcoma, X breakpoint 4 isoform b [Homo
sapiens]
Length = 153
Score = 164 bits (414), Expect = 5e-41
Identities = 82/110 (74%), Positives = 88/110 (80%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAFA+RPRDDA+ SEK KAFDDIAKYFSK+EWEKMK SEKI V+MK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPK 110
LGF VTL FMR+KRA D ND NDRN N+VERPQMTFG LQRI PK
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
>gi|94983919 synovial sarcoma, X breakpoint 4B isoform b [Homo
sapiens]
Length = 153
Score = 164 bits (414), Expect = 5e-41
Identities = 82/110 (74%), Positives = 88/110 (80%)
Query: 1 MNGDDAFAKRPRDDAKASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTK 60
MNGDDAFA+RPRDDA+ SEK KAFDDIAKYFSK+EWEKMK SEKI V+MK YE MTK
Sbjct: 1 MNGDDAFARRPRDDAQISEKLRKAFDDIAKYFSKKEWEKMKSSEKIVYVYMKLNYEVMTK 60
Query: 61 LGFNVTLSLFMRNKRATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPK 110
LGF VTL FMR+KRA D ND NDRN N+VERPQMTFG LQRI PK
Sbjct: 61 LGFKVTLPPFMRSKRAADFHGNDFGNDRNHRNQVERPQMTFGSLQRIFPK 110
>gi|239752309 PREDICTED: hypothetical protein XP_002348195 [Homo
sapiens]
Length = 102
Score = 105 bits (262), Expect = 2e-23
Identities = 50/66 (75%), Positives = 59/66 (89%)
Query: 94 VERPQMTFGRLQRIIPKIMPEKPAEEGSDSKGVPEASGPQNDGKKLCPPGKASSSEKIHE 153
VE PQMTFGRL RIIPKIMP+KPAE+ +DSKGV EASGPQNDGK+L PPGKA+ SEKI++
Sbjct: 37 VEHPQMTFGRLHRIIPKIMPKKPAEDENDSKGVSEASGPQNDGKQLHPPGKANISEKINK 96
Query: 154 RSGPKR 159
RSG ++
Sbjct: 97 RSGKRK 102
>gi|147905620 PR domain containing 9 [Homo sapiens]
Length = 894
Score = 78.6 bits (192), Expect = 3e-15
Identities = 63/203 (31%), Positives = 99/203 (48%), Gaps = 18/203 (8%)
Query: 1 MNGDDAFAKRPRDDAKASEKR---SKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEA 57
M+ + + + P +D + +E++ AF DI+ YF+KEEW +M EK ++KR Y A
Sbjct: 1 MSPEKSQEESPEEDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKRNYNA 60
Query: 58 MTKLGFNVTLSLFMRNKRAT----DSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMP 113
+ +G T FM ++R DSD + +V+ P M QR K MP
Sbjct: 61 LITIGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMALRVEQRKHQKGMP 120
Query: 114 ------EKPAEEGSDSKGVPEASGPQNDGKKLCPPGKASSSEKIHER---SGPKRGKHAW 164
E +E S + + ASG + K + P G+AS+S + H R K+
Sbjct: 121 KASFSNESSLKELSRTANLLNASGSEQAQKPVSPSGEASTSGQ-HSRLKLELRKKETERK 179
Query: 165 THRLRERKQLVIYEEISDPEEDD 187
+ LRERK Y+E+S+P++DD
Sbjct: 180 MYSLRERKGHA-YKEVSEPQDDD 201
>gi|148271100 PR domain containing 7 isoform 1 [Homo sapiens]
Length = 492
Score = 75.1 bits (183), Expect = 3e-14
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 1 MNGDDAFAKRPRDDAKASEKR---SKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEA 57
M+ + + + P D + +E++ AF DI+ YF+KEEW +M EK ++K Y A
Sbjct: 1 MSPERSQEESPEGDTERTERKPMVKDAFKDISIYFTKEEWAEMGDWEKTRYRNVKMNYNA 60
Query: 58 MTKLGFNVTLSLFMRNKRAT----DSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMP 113
+ +G T FM ++R DSD + +V+ P M F Q K MP
Sbjct: 61 LITVGLRATRPAFMCHRRQAIKLQVDDTEDSDEEWTPRQQVKPPWMAFRGEQSKHQKGMP 120
Query: 114 ------EKPAEEGSDSKGVPEASGPQNDGKKLCPPGKASSSE-----KIHERSGPKRGKH 162
E E S + + S + K + PPG+AS+S K+ R GK
Sbjct: 121 KASFNNESSLRELSGTPNLLNTSDSEQAQKPVSPPGEASTSGQHSRLKLELRRKETEGK- 179
Query: 163 AWTHRLRERKQLVIYEEISDPEEDD 187
+ LRERK Y+EIS+P++DD
Sbjct: 180 --MYSLRERKGHA-YKEISEPQDDD 201
>gi|48717241 zinc finger protein 425 [Homo sapiens]
Length = 752
Score = 38.5 bits (88), Expect = 0.003
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 25 FDDIAKYFSKEEWEKM-KFSEKISCVHMKRKYEAMTKLGF 63
FDD+A YFS++EWE + K+ +++ MK YE + LG+
Sbjct: 11 FDDVALYFSEQEWEILEKWQKQMYKQEMKTNYETLDSLGY 50
>gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 37.7 bits (86), Expect = 0.006
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 25 FDDIAKYFSKEEWEKMKFSEKISCVH-MKRKYEAMTKLGFNVTL-SLFMRNKRATDSQRN 82
FDD+A YFS+ EW K++ +K H M+ YE + L + ++ + R +R + +
Sbjct: 145 FDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDILTRIERGEEPCLD 204
Query: 83 DSDNDRNRGNEVERPQMTFGRLQRIIPKI-MPEKPAEE----------GSDSKGVPEASG 131
++ EV RP+M L + P PA+E DS+ +G
Sbjct: 205 RWGQEKGNEVEVGRPRMMGTGLPPYPEHLTSPLSPAQEELKEGQAPKQQQDSEARVAPAG 264
Query: 132 PQNDGKKLCPPGKASSSEKIHER--SGPKRGK 161
P+ G S E ER G RG+
Sbjct: 265 PEAGGGVAIKTEAQSEDEMTPERLFLGVSRGQ 296
>gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo
sapiens]
Length = 546
Score = 37.7 bits (86), Expect = 0.006
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 25 FDDIAKYFSKEEWEKMKFSEKISCVH-MKRKYEAMTKLGFNVTL-SLFMRNKRATDSQRN 82
FDD+A YFS+ EW K++ +K H M+ YE + L + ++ + R +R + +
Sbjct: 145 FDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDILTRIERGEEPCLD 204
Query: 83 DSDNDRNRGNEVERPQMTFGRLQRIIPKI-MPEKPAEE----------GSDSKGVPEASG 131
++ EV RP+M L + P PA+E DS+ +G
Sbjct: 205 RWGQEKGNEVEVGRPRMMGTGLPPYPEHLTSPLSPAQEELKEGQAPKQQQDSEARVAPAG 264
Query: 132 PQNDGKKLCPPGKASSSEKIHER--SGPKRGK 161
P+ G S E ER G RG+
Sbjct: 265 PEAGGGVAIKTEAQSEDEMTPERLFLGVSRGQ 296
>gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo
sapiens]
Length = 546
Score = 37.7 bits (86), Expect = 0.006
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 25 FDDIAKYFSKEEWEKMKFSEKISCVH-MKRKYEAMTKLGFNVTL-SLFMRNKRATDSQRN 82
FDD+A YFS+ EW K++ +K H M+ YE + L + ++ + R +R + +
Sbjct: 145 FDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDILTRIERGEEPCLD 204
Query: 83 DSDNDRNRGNEVERPQMTFGRLQRIIPKI-MPEKPAEE----------GSDSKGVPEASG 131
++ EV RP+M L + P PA+E DS+ +G
Sbjct: 205 RWGQEKGNEVEVGRPRMMGTGLPPYPEHLTSPLSPAQEELKEGQAPKQQQDSEARVAPAG 264
Query: 132 PQNDGKKLCPPGKASSSEKIHER--SGPKRGK 161
P+ G S E ER G RG+
Sbjct: 265 PEAGGGVAIKTEAQSEDEMTPERLFLGVSRGQ 296
>gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 37.7 bits (86), Expect = 0.006
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 25 FDDIAKYFSKEEWEKMKFSEKISCVH-MKRKYEAMTKLGFNVTL-SLFMRNKRATDSQRN 82
FDD+A YFS+ EW K++ +K H M+ YE + L + ++ + R +R + +
Sbjct: 145 FDDVAVYFSELEWGKLEDWQKELYKHVMRGNYETLVSLDYAISKPDILTRIERGEEPCLD 204
Query: 83 DSDNDRNRGNEVERPQMTFGRLQRIIPKI-MPEKPAEE----------GSDSKGVPEASG 131
++ EV RP+M L + P PA+E DS+ +G
Sbjct: 205 RWGQEKGNEVEVGRPRMMGTGLPPYPEHLTSPLSPAQEELKEGQAPKQQQDSEARVAPAG 264
Query: 132 PQNDGKKLCPPGKASSSEKIHER--SGPKRGK 161
P+ G S E ER G RG+
Sbjct: 265 PEAGGGVAIKTEAQSEDEMTPERLFLGVSRGQ 296
>gi|118918411 zinc finger protein 777 [Homo sapiens]
Length = 831
Score = 37.7 bits (86), Expect = 0.006
Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 25 FDDIAKYFSKEEWEKM-KFSEKISCVHMKRKYEAMTKLGFNVT----LSLFMRNKRATDS 79
FDD+A +FS++EW + ++ +++ M+ YE++ + + ++ +S R +R T
Sbjct: 287 FDDVAVHFSEQEWGNLSEWQKELYKNVMRGNYESLVSMDYAISKPDLMSQMERGERPTMQ 346
Query: 80 QRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEGSDSKGVPE 128
++ DS+ E E P I+ KI + +EGS+S PE
Sbjct: 347 EQEDSE-------EGETPTDPSAAHDGIVIKI-EVQTNDEGSESLETPE 387
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 35.8 bits (81), Expect = 0.022
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 66 TLSLFMRNKRATDSQRNDSDNDRNRGNE---VERPQMTFGRLQRIIPKIMPEKPAEEGSD 122
TL ++ K+ Q ++ R + ++ +R + G L+ +I D
Sbjct: 12 TLDEILQEKKRRKEQEEKAEIKRLKNSDDRDSKRDSLEEGELRDHCMEITIRNSPYRRED 71
Query: 123 SKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTH-RLRERK 172
S E G ++D + PP + S EK+H R KR K W H R++ER+
Sbjct: 72 SM---EDRGEEDDSLAIKPPQQMSRKEKVHHRKDEKR-KEKWKHARVKERE 118
>gi|20304115 zinc finger protein 551 [Homo sapiens]
Length = 654
Score = 35.4 bits (80), Expect = 0.029
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 6/138 (4%)
Query: 25 FDDIAKYFSKEEWEKMKFSEK-ISCVHMKRKYEAMTKLGFNVTLSLFMRNKRATDSQRND 83
F+D+A YFS+EEWE + S++ + C M + +T LG+ A S+++
Sbjct: 15 FEDVAIYFSQEEWELLDESQRFLYCDVMLENFAHVTSLGY-----CHGMENEAIASEQSV 69
Query: 84 SDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEGSDSKGVPEASGPQNDGKKLCPPG 143
S R + ++ +P + PA E + V ++ + C
Sbjct: 70 SIQVRTSKGNTPTQKTHLSEIKMCVPVLKDILPAAEHQTTSPVQKSYLGSTSMRGFCFSA 129
Query: 144 KASSSEKIHERSGPKRGK 161
+K + P + K
Sbjct: 130 DLHQHQKHYNEEEPWKRK 147
>gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens]
Length = 506
Score = 35.0 bits (79), Expect = 0.038
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 78 DSQRNDSDNDRNRGNEVERPQMT--FGRLQRIIPKIMPEKPAEEGSDSKGVPEASGPQND 135
+ + N +N + E E P+ ++ +PK +PE AEE +DSK EA+ +
Sbjct: 191 EEEENPKENPEVKAEEKEVPKEIPEVKDEEKEVPKEIPEVKAEEKADSKDCMEATPEVKE 250
Query: 136 GKKLCPPGKASSSEKIHERSGPKRGKHAWTHR 167
K P KA E+ R TH+
Sbjct: 251 DPKEVPQVKADDKEQPKATEAKARAAVRETHK 282
>gi|239747195 PREDICTED: similar to PITSLRE protein kinase beta SV2
[Homo sapiens]
Length = 153
Score = 35.0 bits (79), Expect = 0.038
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 66 TLSLFMRNKRATDSQRNDSDNDRNRGNE---VERPQMTFGRLQRIIPKIMPEKPAEEGSD 122
TL ++ K+ Q ++ R + ++ +R + G L+ +I D
Sbjct: 12 TLDEILQEKKRRKEQEEKAEIKRLKNSDDRDSKRDSLEEGELRDHCMEITIRNSPYRRED 71
Query: 123 SKGVPEASGPQNDGKKLCPPGKASSSEKIHERSGPKRGKHAWTH-RLRERK 172
S E G ++D + PP + S EK+H R KR K W H R++ER+
Sbjct: 72 SM---EDRGEEDDSLAIKPPQQMSWKEKVHHRKDEKR-KEKWKHARVKERE 118
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 33.9 bits (76), Expect = 0.085
Identities = 47/173 (27%), Positives = 69/173 (39%), Gaps = 38/173 (21%)
Query: 16 KASEKRSKAFDDIAKYFSKEEWEKMKFSEKISCVHMKRKYEAMTKLGFNVTLSLFMRNKR 75
+ +EK K D K SKE + + SEK K K A +K R+K
Sbjct: 418 RKNEKEKKVKDH--KSNSKER-DIRRNSEKDDKYKNKVKKRAKSK----------SRSKS 464
Query: 76 ATDSQRNDSDNDRNRGNEVERPQMTFGRLQRIIPKIMPEKPAEEGSDSKGVP-EASGPQN 134
S+ + D+ NR E + GR + K E+ SDSKG E S +
Sbjct: 465 KEKSKSKERDSKHNRNEEKRMRSRSKGRDHENV------KEKEKQSDSKGKDQERSRSKE 518
Query: 135 DGKKLCPPGKASSSEKIHERSGPK--------------RGKHAWTHRLRERKQ 173
K+L ++ S+E H +S K +GKH++ R RER +
Sbjct: 519 KSKQL----ESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSR 567
>gi|25777704 zinc finger 398 isoform a [Homo sapiens]
Length = 642
Score = 33.9 bits (76), Expect = 0.085
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 24 AFDDIAKYFSKEEWEKM-KFSEKISCVHMKRKYEAMTKLGFNV 65
AFDD++ YFS EWEK+ ++ +++ MK YE++ + + +
Sbjct: 144 AFDDVSIYFSTPEWEKLEEWQKELYKNIMKGNYESLISMDYAI 186
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,174,983
Number of Sequences: 37866
Number of extensions: 387087
Number of successful extensions: 1800
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 1676
Number of HSP's gapped (non-prelim): 199
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.