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Search of human proteins with 254028213
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|254028213 IQ motif containing F6 [Homo sapiens]
(107 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|254028213 IQ motif containing F6 [Homo sapiens] 221 8e-59
gi|222831628 IQ motif containing F5 [Homo sapiens] 125 6e-30
gi|44662817 IQ motif containing F2 [Homo sapiens] 115 1e-26
gi|229577354 IQ motif containing F1 [Homo sapiens] 114 2e-26
gi|146261997 IQ motif containing F3 [Homo sapiens] 99 7e-22
gi|126116596 asp (abnormal spindle)-like, microcephaly associate... 39 0.001
gi|29826341 calmodulin binding transcription activator 2 [Homo s... 37 0.003
gi|122937345 myosin VB [Homo sapiens] 35 0.010
gi|153945715 myosin VC [Homo sapiens] 35 0.013
gi|118402590 myosin XV [Homo sapiens] 35 0.017
gi|189083802 myosin VIIA isoform 2 [Homo sapiens] 35 0.017
gi|189083800 myosin VIIA isoform 3 [Homo sapiens] 35 0.017
gi|189083798 myosin VIIA isoform 1 [Homo sapiens] 35 0.017
gi|215982794 myosin VA isoform 2 [Homo sapiens] 34 0.022
gi|215982791 myosin VA isoform 1 [Homo sapiens] 34 0.022
gi|39753961 IQ motif containing GTPase activating protein 3 [Hom... 34 0.029
gi|124494247 myosin IC isoform b [Homo sapiens] 33 0.038
gi|124494238 myosin IC isoform a [Homo sapiens] 33 0.038
gi|124494240 myosin IC isoform c [Homo sapiens] 33 0.038
gi|254028267 myosin 1H [Homo sapiens] 32 0.11
gi|4506787 IQ motif containing GTPase activating protein 1 [Homo... 32 0.14
gi|54112401 calmodulin-binding transcription activator 1 [Homo s... 32 0.14
gi|122937512 myosin VIIB [Homo sapiens] 32 0.14
gi|224451032 KIAA1683 isoform a [Homo sapiens] 31 0.19
gi|224451036 KIAA1683 isoform c [Homo sapiens] 31 0.19
gi|54606862 KIAA1683 isoform b [Homo sapiens] 31 0.19
gi|156119615 myosin IXA [Homo sapiens] 30 0.32
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 30 0.32
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 30 0.32
gi|19923615 myosin head domain containing 1 isoform 1 [Homo sapi... 30 0.42
>gi|254028213 IQ motif containing F6 [Homo sapiens]
Length = 107
Score = 221 bits (564), Expect = 8e-59
Identities = 107/107 (100%), Positives = 107/107 (100%)
Query: 1 MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARR 60
MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARR
Sbjct: 1 MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARR 60
Query: 61 RFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASRLELDIEILMT 107
RFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASRLELDIEILMT
Sbjct: 61 RFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASRLELDIEILMT 107
>gi|222831628 IQ motif containing F5 [Homo sapiens]
Length = 148
Score = 125 bits (315), Expect = 6e-30
Identities = 54/104 (51%), Positives = 75/104 (72%)
Query: 1 MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARR 60
+VRRTLL AALRAW+IQCWWR + K+L +RRR+ L Y QEWA V++Q+ VRMW R+
Sbjct: 26 LVRRTLLHAALRAWIIQCWWRQVLEKLLAKRRRMVLEFYVQQEWAAVRLQSWVRMWCVRQ 85
Query: 61 RFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASRLELDIEI 104
R+ + A IIQ +WRWH+ +R I GHYE++ ++L + +EI
Sbjct: 86 RYCRLLNAVRIIQVYWRWHSCHSRVFIEGHYELKENQLNIQLEI 129
>gi|44662817 IQ motif containing F2 [Homo sapiens]
Length = 164
Score = 115 bits (287), Expect = 1e-26
Identities = 54/105 (51%), Positives = 74/105 (70%)
Query: 1 MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARR 60
+VRRTLL AALRAW+IQCWWR +++LE++R+ AL Y +E AV+K+Q+ VRMW+ R
Sbjct: 58 LVRRTLLHAALRAWIIQCWWRMTLSRVLEKKRQAALIAYATRERAVIKLQSLVRMWRVRW 117
Query: 61 RFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASRLELDIEIL 105
R+ Q A IIQ HW+ H QT L++GH V A+ L+ IEI+
Sbjct: 118 RYCQVLNAIYIIQGHWQCHNCQTCALLQGHCVVTATHLQFHIEII 162
Score = 32.7 bits (73), Expect = 0.065
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 20 WRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWRWH 79
W+++Q K +Q+ + LR+ T A VK+QA R RR L A A IIQ WR
Sbjct: 25 WKTLQKKK-QQKIKEKLRIRTK---AAVKIQAWWRGTLVRRTLLHAALRAWIIQCWWRMT 80
Query: 80 ASQ 82
S+
Sbjct: 81 LSR 83
>gi|229577354 IQ motif containing F1 [Homo sapiens]
Length = 205
Score = 114 bits (285), Expect = 2e-26
Identities = 52/106 (49%), Positives = 76/106 (71%)
Query: 1 MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARR 60
+VRR LL AAL A +IQCWWR + +K+L++RR+ AL ++ +EWA V +Q+Q RMW+ RR
Sbjct: 83 LVRRALLHAALSACIIQCWWRLILSKILKKRRQAALEAFSRKEWAAVTLQSQARMWRIRR 142
Query: 61 RFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASRLELDIEILM 106
R+ Q A IIQ++WR + +RG I+G Y V A++L L +EIL+
Sbjct: 143 RYCQVLNAVRIIQAYWRCRSCASRGFIKGQYRVTANQLHLQLEILL 188
Score = 29.6 bits (65), Expect = 0.55
Identities = 15/36 (41%), Positives = 19/36 (52%)
Query: 42 QEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
++ K+QA R RR L A +ACIIQ WR
Sbjct: 68 KDTVATKIQAWWRGTLVRRALLHAALSACIIQCWWR 103
>gi|146261997 IQ motif containing F3 [Homo sapiens]
Length = 154
Score = 99.0 bits (245), Expect = 7e-22
Identities = 49/105 (46%), Positives = 68/105 (64%)
Query: 1 MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARR 60
+VRRTLL AALRAW+IQCWWR++ + + QRR+ LR+Y QE A VK+Q+ +RMWQ R+
Sbjct: 48 LVRRTLLVAALRAWMIQCWWRTLVQRRIRQRRQALLRVYVIQEQATVKLQSCIRMWQCRQ 107
Query: 61 RFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASRLELDIEIL 105
+ Q A C+ Q A QT G ++ Y + + + E IEIL
Sbjct: 108 CYRQMCNALCLFQVPESSLAFQTDGFLQVQYAIPSKQPEFHIEIL 152
Score = 26.2 bits (56), Expect = 6.1
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 28 LEQRRRLALRLYTCQEWAVVKVQAQVRMWQ----ARRRFLQARQAACIIQSHWR 77
+E++RR L L VK Q++ W RR L A A +IQ WR
Sbjct: 15 VERQRRQKLLLAQLHHRKRVKAAGQIQAWWRGVLVRRTLLVAALRAWMIQCWWR 68
>gi|126116596 asp (abnormal spindle)-like, microcephaly associated
[Homo sapiens]
Length = 3477
Score = 38.5 bits (88), Expect = 0.001
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 10/65 (15%)
Query: 13 AWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACII 72
A VIQ +WR Q ++ R L L+ ++K QA VR Q R+++ + ++AA II
Sbjct: 1563 ACVIQSYWRMRQDRV----RFLNLKK------TIIKFQAHVRKHQQRQKYKKMKKAAVII 1612
Query: 73 QSHWR 77
Q+H+R
Sbjct: 1613 QTHFR 1617
Score = 38.5 bits (88), Expect = 0.001
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 12/77 (15%)
Query: 13 AWVIQCWWRSMQAKMLEQRRRLALRL------------YTCQEWAVVKVQAQVRMWQARR 60
A IQ + M + LE ++ ALR+ + Q+ A + +Q R WQ R+
Sbjct: 2818 AVTIQKAFCRMVTRKLETQKCAALRIQFFLQMAVYRRRFVQQKRAAITLQHYFRTWQTRK 2877
Query: 61 RFLQARQAACIIQSHWR 77
+FL R+AA ++Q+H+R
Sbjct: 2878 QFLLYRKAAVVLQNHYR 2894
Score = 37.7 bits (86), Expect = 0.002
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 1 MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARR 60
M+RR L A +IQ R +A + + L++ AV+K+Q+ R W R+
Sbjct: 2277 MMRRRFLSLKKTAILIQ---RKYRAHLCTKHHLQFLQVQN----AVIKIQSSYRRWMIRK 2329
Query: 61 RFLQARQAACIIQSHWRWHASQTR 84
R + +AA IQS +R H R
Sbjct: 2330 RMREMHRAATFIQSTFRMHRLHMR 2353
Score = 36.6 bits (83), Expect = 0.004
Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 16/83 (19%)
Query: 16 IQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQSH 75
IQ WR +AK Y C+ A K+QA R W+A + +L +A IIQ
Sbjct: 2939 IQAMWRRYRAKK-----------YLCKVKAACKIQAWYRCWRAHKEYLAILKAVKIIQGC 2987
Query: 76 WRWHASQTRGLIRGHYEVRASRL 98
+ +TR L VRAS +
Sbjct: 2988 FYTKLERTRFL-----NVRASAI 3005
Score = 33.5 bits (75), Expect = 0.038
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 15 VIQCWWRSMQAKMLEQRRRLALRL-----------------YTCQEWAVVKVQAQVRMWQ 57
+IQ +R QA+ L +RR+ ++ Y + A +++QA R +
Sbjct: 1493 IIQKRFRCFQAQKLYKRRKESILTIQKYYKAYLKGKIERTNYLQKRAAAIQLQAAFRRLK 1552
Query: 58 ARRRFLQARQAACIIQSHWRWHASQTRGL 86
A Q R AAC+IQS+WR + R L
Sbjct: 1553 AHNLCRQIR-AACVIQSYWRMRQDRVRFL 1580
Score = 32.7 bits (73), Expect = 0.065
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 3 RRTLLQAALRAWV-IQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRR 61
+R Q+ L++ + IQ W+R+ K L R L+ AV+ +Q+ R W+ R++
Sbjct: 1840 KRVKYQSVLQSIIKIQRWYRAY--KTLHDTRTHFLKTKA----AVISLQSAYRGWKVRKQ 1893
Query: 62 FLQARQAACIIQSHWRWHASQ 82
+ QAA IQS +R +Q
Sbjct: 1894 IRREHQAALKIQSAFRMAKAQ 1914
Score = 31.6 bits (70), Expect = 0.14
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 13/76 (17%)
Query: 15 VIQCWWRSMQAKMLE-------------QRRRLALRLYTCQEWAVVKVQAQVRMWQARRR 61
V+Q +R MQA+ + R ++ + + + A +K+Q+ V+M Q R++
Sbjct: 1638 VLQSAYRGMQARKMYIHILTSVIKIQSYYRAYVSKKEFLSLKNATIKLQSTVKMKQTRKQ 1697
Query: 62 FLQARQAACIIQSHWR 77
+L R AA IQ +R
Sbjct: 1698 YLHLRAAALFIQQCYR 1713
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/77 (24%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 6 LLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQA 65
++Q +A+ I+ + ++A ++ +RR +L + AV+ +Q+ R ++ R+
Sbjct: 2630 IIQKHCKAFKIRKHYLHLRATVVSIQRRYR-KLTAVRTQAVICIQSYYRGFKVRKDIQNM 2688
Query: 66 RQAACIIQSHWRWHASQ 82
+AA +IQS +R H ++
Sbjct: 2689 HRAATLIQSFYRMHRAK 2705
Score = 31.2 bits (69), Expect = 0.19
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 3 RRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRF 62
R L A +IQ WR++ + L ++ + A +QA R ++ R+ F
Sbjct: 2994 RTRFLNVRASAIIIQRKWRAILPAKIAHEHFLMIKRHR----AACLIQAHYRGYKGRQVF 3049
Query: 63 LQARQAACIIQSHWR 77
L+ + AA IIQ + R
Sbjct: 3050 LRQKSAALIIQKYIR 3064
Score = 30.4 bits (67), Expect = 0.32
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 20/77 (25%)
Query: 7 LQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQAR 66
LQ+A R W K+ +Q RR + A +K+Q+ RM +A+++F +
Sbjct: 1881 LQSAYRGW-----------KVRKQIRR--------EHQAALKIQSAFRMAKAQKQFRLFK 1921
Query: 67 QAACIIQSHWR-WHASQ 82
AA +IQ ++R W A +
Sbjct: 1922 TAALVIQQNFRAWTAGR 1938
Score = 29.6 bits (65), Expect = 0.55
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 31 RRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWRWHASQTRGLIRGH 90
R+R+ L + W V Q ++ M + + +AA +IQ +WR ++++ R L +
Sbjct: 1313 RKRVNAALVIQKYWRRVLAQRKLLMLKKEKLEKVQNKAASLIQGYWRRYSTRQRFLKLKY 1372
Query: 91 YE-VRASRLELDIEI 104
Y + SR+ + I +
Sbjct: 1373 YSIILQSRIRMIIAV 1387
Score = 29.6 bits (65), Expect = 0.55
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 8/87 (9%)
Query: 6 LLQAALRAWVIQCWWRSMQ-AKMLEQRRRLAL-------RLYTCQEWAVVKVQAQVRMWQ 57
++Q+ R V Q W+ M+ A +L Q+ A LY + AVV +Q+ R +
Sbjct: 1976 IIQSYYRMHVQQKKWKIMKKAALLIQKYYRAYSIGREQNHLYLKTKAAVVTLQSAYRGMK 2035
Query: 58 ARRRFLQARQAACIIQSHWRWHASQTR 84
R+R +AA IQS +R + ++ +
Sbjct: 2036 VRKRIKDCNKAAVTIQSKYRAYKTKKK 2062
Score = 28.9 bits (63), Expect = 0.93
Identities = 13/41 (31%), Positives = 27/41 (65%)
Query: 42 QEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWRWHASQ 82
Q AV+ +Q+ RM +AR+ +L+ +A +IQ+++ + +Q
Sbjct: 1751 QRKAVISLQSYFRMRKARQYYLKMYKAIIVIQNYYHAYKAQ 1791
Score = 28.9 bits (63), Expect = 0.93
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Query: 3 RRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRF 62
R+ L+ A +IQ + R+ +A E+ + + + T V +QA VR W R+RF
Sbjct: 3046 RQVFLRQKSAALIIQKYIRAREAGKHERIKYIEFKKST------VILQALVRGWLVRKRF 3099
Query: 63 LQAR 66
L+ R
Sbjct: 3100 LEQR 3103
Score = 28.5 bits (62), Expect = 1.2
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 30/103 (29%)
Query: 1 MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALR---LYTCQEWAVVKVQAQVRMWQ 57
+ ++ L + A VIQ +WR ++L QR+ L L+ L Q A +Q R +
Sbjct: 1307 LAKQRLRKRVNAALVIQKYWR----RVLAQRKLLMLKKEKLEKVQNKAASLIQGYWRRYS 1362
Query: 58 ARRRFLQARQAACI-----------------------IQSHWR 77
R+RFL+ + + I IQ HWR
Sbjct: 1363 TRQRFLKLKYYSIILQSRIRMIIAVTSYKRYLWATVTIQRHWR 1405
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/49 (32%), Positives = 23/49 (46%)
Query: 31 RRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWRWH 79
R + A R A +Q + R RRRFL ++ A +IQ +R H
Sbjct: 2251 RGKKARRHLKMMHIAATLIQRRFRTLMMRRRFLSLKKTAILIQRKYRAH 2299
Score = 28.1 bits (61), Expect = 1.6
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 13 AWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACII 72
A +IQ W+R ++ + + L L+ +K+Q+ R + RR +AA I
Sbjct: 2070 AIIIQRWYRGIKITNHQHKEYLNLKK------TAIKIQSVYRGIRVRRHIQHMHRAATFI 2123
Query: 73 QSHWRWHASQ 82
++ ++ H S+
Sbjct: 2124 KAMFKMHQSR 2133
Score = 28.1 bits (61), Expect = 1.6
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 5 TLLQAALRAWVIQCWWRSMQ--AKMLEQR------RRLALRLYTCQEWAVVKVQAQVRMW 56
TL+Q+ R + Q ++ ++ K ++QR R + + Y +V+ +QA R
Sbjct: 2194 TLIQSNYRRYRQQTYFNKLKKITKTVQQRYWAMKERNIQFQRYNKLRHSVIYIQAIFRGK 2253
Query: 57 QARRRFLQARQAACIIQSHWR 77
+ARR AA +IQ +R
Sbjct: 2254 KARRHLKMMHIAATLIQRRFR 2274
Score = 26.9 bits (58), Expect = 3.5
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 13 AWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACII 72
A +IQ WR + K L+ + +E A +Q V + A++R + AA +I
Sbjct: 1270 ARLIQTTWRKYKLKT-------DLKRHQEREKAARIIQLAVINFLAKQRLRKRVNAALVI 1322
Query: 73 QSHWRWHASQTRGLI 87
Q +WR +Q + L+
Sbjct: 1323 QKYWRRVLAQRKLLM 1337
Score = 26.6 bits (57), Expect = 4.6
Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 16 IQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQSH 75
IQ WR+ + +Q+R Y + + + +Q+ R W+ R+ Q + + ++
Sbjct: 1400 IQRHWRAYLRRKQDQQR------YEMLKSSTLIIQSMFRKWKQRKMQSQVKATVILQRAF 1453
Query: 76 WRWH 79
WH
Sbjct: 1454 REWH 1457
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 45 AVVKVQAQVRMWQARRRFLQARQAACIIQSHWRWHASQTR 84
AV+ +Q+ + RR+ + + A IIQS++R H Q +
Sbjct: 1950 AVLVLQSMWKGKTLRRQLQRQHKCAIIIQSYYRMHVQQKK 1989
Score = 26.6 bits (57), Expect = 4.6
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 10/88 (11%)
Query: 6 LLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEW---AVVKVQAQVRMWQARRRF 62
+LQA +R W++ + + LEQR ++ L +T + V++Q +++ A +
Sbjct: 3085 ILQALVRGWLV-------RKRFLEQRAKIRLLHFTAAAYYHLNAVRIQRAYKLYLAVKNA 3137
Query: 63 LQARQAACIIQSHWRWHASQTRGLIRGH 90
+ + IQ +R + R + + H
Sbjct: 3138 NKQVNSVICIQRWFRARLQEKRFIQKYH 3165
Score = 26.2 bits (56), Expect = 6.1
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 31 RRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
RR + + + A V +QA RM++ F + A+ +IQ H+R
Sbjct: 2469 RRLMVKKKLQEMQRAAVLIQATFRMYRTYITFQTWKHASILIQQHYR 2515
Score = 25.8 bits (55), Expect = 7.9
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 32 RRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWRWHASQTR 84
RRL Q A +Q+ RM Q R RFL ++ Q+H R H + +
Sbjct: 1549 RRLKAHNLCRQIRAACVIQSYWRMRQDRVRFLNLKKTIIKFQAHVRKHQQRQK 1601
Score = 25.8 bits (55), Expect = 7.9
Identities = 21/75 (28%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 3 RRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRF 62
R+ L A IQ +RS K+ Q+R +++ + +K+QA VR + R++
Sbjct: 1695 RKQYLHLRAAALFIQQCYRSK--KIAAQKREEYMQMRE----SCIKLQAFVRGYLVRKQM 1748
Query: 63 LQARQAACIIQSHWR 77
R+A +QS++R
Sbjct: 1749 RLQRKAVISLQSYFR 1763
Score = 25.8 bits (55), Expect = 7.9
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 6 LLQAALRAWVIQCWWRSMQ--AKMLEQRRR--LALRLYTCQEWAVVKVQAQVRMWQARR- 60
+LQAA R + +SM A +++ R R L R + + A + VQ + R +
Sbjct: 2390 ILQAAFRGMKTRRHLKSMHSSATLIQSRFRSLLVRRRFISLKKATIFVQRKYRATICAKH 2449
Query: 61 ---RFLQARQAACIIQSHWR 77
+FL R+AA IQS +R
Sbjct: 2450 KLYQFLHLRKAAITIQSSYR 2469
>gi|29826341 calmodulin binding transcription activator 2 [Homo
sapiens]
Length = 1202
Score = 37.4 bits (85), Expect = 0.003
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 3 RRTLLQAALRAWVIQ-CWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRR 61
RR Q + A VIQ C+ + Q + L LY A + +Q++ R + ++R
Sbjct: 1065 RRLKEQQEVAAAVIQRCYRKYKQLTWIA----LKFALYKKMTQAAILIQSKFRSYYEQKR 1120
Query: 62 FLQARQAACIIQSHWR 77
F Q+R+AA +IQ H+R
Sbjct: 1121 FQQSRRAAVLIQQHYR 1136
>gi|122937345 myosin VB [Homo sapiens]
Length = 1848
Score = 35.4 bits (80), Expect = 0.010
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 23/102 (22%)
Query: 13 AWVIQCWWRSMQAKMLEQRRRLAL-------------RLY--TCQEWAVVKVQAQVRMWQ 57
A V+Q +R +A+ QR R A R Y E +Q VR W
Sbjct: 816 AVVLQKHYRMQRARQAYQRVRRAAVVIQAFTRAMFVRRTYRQVLMEHKATTIQKHVRGWM 875
Query: 58 ARRRFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASRLE 99
ARR F + R AA +IQ +R +++ E++A R+E
Sbjct: 876 ARRHFQRLRDAAIVIQCAFR--------MLKARRELKALRIE 909
>gi|153945715 myosin VC [Homo sapiens]
Length = 1742
Score = 35.0 bits (79), Expect = 0.013
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Query: 19 WWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
++R+ Q LE+ R LR + V VQ +R W R++FL+ R+AA IIQ ++R
Sbjct: 739 FFRAGQVAYLEKLRLDKLRQ------SCVMVQKHMRGWLQRKKFLRERRAALIIQQYFR 791
Score = 27.3 bits (59), Expect = 2.7
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 19/95 (20%)
Query: 2 VRRTLLQAALR-AW---VIQCWWRSMQAKMLEQRRRLA---LRLYT------------CQ 42
VR+ + AL+ AW +IQ R + L Q R+A ++ Y+ +
Sbjct: 796 VRKAITAVALKEAWAAIIIQKHCRGYLVRSLYQLIRMATITMQAYSRGFLARRRYRKMLE 855
Query: 43 EWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
E V +Q R W ARRRF R+ IQ +R
Sbjct: 856 EHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYR 890
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 34.7 bits (78), Expect = 0.017
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 7 LQAALRAWVIQCWWRSMQAK--MLEQRRR--LALRLYTCQEWAVVKVQAQVRMWQARRRF 62
LQ LR + I+ +RS++ K +L+ R R LA + Y ++VK ++ V + +RRR+
Sbjct: 1909 LQRCLRGFFIKRRFRSLRHKIILLQSRARGYLARQRYQQMRRSLVKFRSLVHAYVSRRRY 1968
Query: 63 LQAR-QAACIIQSHWRW---HASQTRGLIRGHYEVRA 95
L+ R + C ++ W S+ + GH EV A
Sbjct: 1969 LKLRAEWRCQVEGALLWEQEELSKREVVAVGHLEVPA 2005
>gi|189083802 myosin VIIA isoform 2 [Homo sapiens]
Length = 2175
Score = 34.7 bits (78), Expect = 0.017
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 46 VVKVQAQVRMWQARRRFLQARQAACIIQSHWRWH-ASQTRGLIR 88
V+ +Q +R ++ R FL+ + AA +IQ HWR H + GL+R
Sbjct: 748 VILLQKVIRGFKDRSNFLKLKNAATLIQRHWRGHNCRKNYGLMR 791
>gi|189083800 myosin VIIA isoform 3 [Homo sapiens]
Length = 1204
Score = 34.7 bits (78), Expect = 0.017
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 46 VVKVQAQVRMWQARRRFLQARQAACIIQSHWRWH-ASQTRGLIR 88
V+ +Q +R ++ R FL+ + AA +IQ HWR H + GL+R
Sbjct: 748 VILLQKVIRGFKDRSNFLKLKNAATLIQRHWRGHNCRKNYGLMR 791
>gi|189083798 myosin VIIA isoform 1 [Homo sapiens]
Length = 2215
Score = 34.7 bits (78), Expect = 0.017
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 46 VVKVQAQVRMWQARRRFLQARQAACIIQSHWRWH-ASQTRGLIR 88
V+ +Q +R ++ R FL+ + AA +IQ HWR H + GL+R
Sbjct: 748 VILLQKVIRGFKDRSNFLKLKNAATLIQRHWRGHNCRKNYGLMR 791
>gi|215982794 myosin VA isoform 2 [Homo sapiens]
Length = 1828
Score = 34.3 bits (77), Expect = 0.022
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 34 LALRLYTCQEWAVVKVQAQVRMWQAR--RRFLQARQAACIIQSHWRWHASQTRGLIR 88
L + Y A + +Q VR +QAR +FL+ +AA IIQ +WR + + R IR
Sbjct: 781 LLRKKYLRMRKAAITMQRYVRGYQARCYAKFLRRTKAATIIQKYWRMYVVRRRYKIR 837
Score = 28.9 bits (63), Expect = 0.93
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 7 LQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTC------QEWAVVKVQAQVRMWQARR 60
+Q +R W+++ + M+ + +R + C + A +Q RM+ RR
Sbjct: 773 IQKTIRGWLLRKKYLRMRKAAITMQRYVRGYQARCYAKFLRRTKAATIIQKYWRMYVVRR 832
Query: 61 RFLQARQAACIIQSHWRWHASQT--RGLIRGHYEV 93
R+ R A ++QS+ R ++ R ++R H V
Sbjct: 833 RYKIRRAATIVLQSYLRGFLARNRYRKILREHKAV 867
>gi|215982791 myosin VA isoform 1 [Homo sapiens]
Length = 1855
Score = 34.3 bits (77), Expect = 0.022
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 34 LALRLYTCQEWAVVKVQAQVRMWQAR--RRFLQARQAACIIQSHWRWHASQTRGLIR 88
L + Y A + +Q VR +QAR +FL+ +AA IIQ +WR + + R IR
Sbjct: 781 LLRKKYLRMRKAAITMQRYVRGYQARCYAKFLRRTKAATIIQKYWRMYVVRRRYKIR 837
Score = 28.9 bits (63), Expect = 0.93
Identities = 22/95 (23%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 7 LQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTC------QEWAVVKVQAQVRMWQARR 60
+Q +R W+++ + M+ + +R + C + A +Q RM+ RR
Sbjct: 773 IQKTIRGWLLRKKYLRMRKAAITMQRYVRGYQARCYAKFLRRTKAATIIQKYWRMYVVRR 832
Query: 61 RFLQARQAACIIQSHWRWHASQT--RGLIRGHYEV 93
R+ R A ++QS+ R ++ R ++R H V
Sbjct: 833 RYKIRRAATIVLQSYLRGFLARNRYRKILREHKAV 867
>gi|39753961 IQ motif containing GTPase activating protein 3 [Homo
sapiens]
Length = 1631
Score = 33.9 bits (76), Expect = 0.029
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 11 LRAWV-----IQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQ 64
LR W+ IQ WR + + + L+ + A++K+QA RMW ARR++L+
Sbjct: 757 LRTWLPAVIKIQAHWRGYRQRKIYLEW---LQYFKANLDAIIKIQAWARMWAARRQYLR 812
>gi|124494247 myosin IC isoform b [Homo sapiens]
Length = 1044
Score = 33.5 bits (75), Expect = 0.038
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 12/54 (22%)
Query: 48 KVQAQVRMWQARRRFLQARQAACIIQSHWR------------WHASQTRGLIRG 89
K+QA R + R++FL+ +++A IQS WR W A R LIRG
Sbjct: 721 KIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAAQTIRRLIRG 774
>gi|124494238 myosin IC isoform a [Homo sapiens]
Length = 1063
Score = 33.5 bits (75), Expect = 0.038
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 12/54 (22%)
Query: 48 KVQAQVRMWQARRRFLQARQAACIIQSHWR------------WHASQTRGLIRG 89
K+QA R + R++FL+ +++A IQS WR W A R LIRG
Sbjct: 740 KIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAAQTIRRLIRG 793
>gi|124494240 myosin IC isoform c [Homo sapiens]
Length = 1028
Score = 33.5 bits (75), Expect = 0.038
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 12/54 (22%)
Query: 48 KVQAQVRMWQARRRFLQARQAACIIQSHWR------------WHASQTRGLIRG 89
K+QA R + R++FL+ +++A IQS WR W A R LIRG
Sbjct: 705 KIQAAWRGFHWRQKFLRVKRSAICIQSWWRGTLGRRKAAKRKWAAQTIRRLIRG 758
>gi|254028267 myosin 1H [Homo sapiens]
Length = 1022
Score = 32.0 bits (71), Expect = 0.11
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 46 VVKVQAQVRMWQARRRFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASR 97
V ++QA + RR +++ RQAA +++HWR A + + R + VR R
Sbjct: 698 VARIQATYKRCLGRREYVKKRQAAIKLEAHWR-GALARKAIQRRKWAVRIIR 748
>gi|4506787 IQ motif containing GTPase activating protein 1 [Homo
sapiens]
Length = 1657
Score = 31.6 bits (70), Expect = 0.14
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 16 IQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRF 62
IQ WR + K Q R LR + + VVK+Q+ RM QAR+R+
Sbjct: 782 IQSQWRGYKQKKAYQDRLAYLRSHKDE---VVKIQSLARMHQARKRY 825
>gi|54112401 calmodulin-binding transcription activator 1 [Homo
sapiens]
Length = 1673
Score = 31.6 bits (70), Expect = 0.14
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 38 LYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
LY A + +Q++ R + +++F Q+R+AA +IQ ++R
Sbjct: 1566 LYKKMTQAAILIQSKFRSYYEQKKFQQSRRAAVLIQKYYR 1605
>gi|122937512 myosin VIIB [Homo sapiens]
Length = 2116
Score = 31.6 bits (70), Expect = 0.14
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 21 RSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWRWHA 80
R Q +LE +R L + A + +Q +R ++ R+ FL+ R+AA +Q+ WR +
Sbjct: 748 RDHQDTLLEVQRSQVL------DRAALSIQKVLRGYRYRKEFLRQRRAAVTLQAWWRGYC 801
Query: 81 SQ 82
++
Sbjct: 802 NR 803
Score = 30.4 bits (67), Expect = 0.32
Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 3 RRTLLQAALRAWVIQCWWR-------------SMQAKMLEQRRRLALRLYTCQEWAVVKV 49
R+ L+ A +Q WWR + R + R Y V++
Sbjct: 780 RKEFLRQRRAAVTLQAWWRGYCNRRNFKLILVGFERLQAIARSQPLARQYQAMRQRTVQL 839
Query: 50 QAQVRMWQARRRFLQARQAACIIQSHWRWHASQ 82
QA R + R++ R+A +IQ+H R A++
Sbjct: 840 QALCRGYLVRQQVQAKRRAVVVIQAHARGMAAR 872
>gi|224451032 KIAA1683 isoform a [Homo sapiens]
Length = 1367
Score = 31.2 bits (69), Expect = 0.19
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 45 AVVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
AV+ +QA VR + ARRR + A +IQ+ WR
Sbjct: 1116 AVITIQAGVRGYLARRRIRLWHRGAMVIQATWR 1148
Score = 29.3 bits (64), Expect = 0.71
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 42 QEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWRWHASQT 83
Q+ A +Q+ R ++ R++ Q + AA I+Q+ WR H +++
Sbjct: 1300 QDKAATAIQSAWRGFKIRQQMRQQQMAAKIVQATWRGHHTRS 1341
>gi|224451036 KIAA1683 isoform c [Homo sapiens]
Length = 1134
Score = 31.2 bits (69), Expect = 0.19
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 45 AVVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
AV+ +QA VR + ARRR + A +IQ+ WR
Sbjct: 883 AVITIQAGVRGYLARRRIRLWHRGAMVIQATWR 915
Score = 29.3 bits (64), Expect = 0.71
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 42 QEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWRWHASQT 83
Q+ A +Q+ R ++ R++ Q + AA I+Q+ WR H +++
Sbjct: 1067 QDKAATAIQSAWRGFKIRQQMRQQQMAAKIVQATWRGHHTRS 1108
>gi|54606862 KIAA1683 isoform b [Homo sapiens]
Length = 1180
Score = 31.2 bits (69), Expect = 0.19
Identities = 15/33 (45%), Positives = 21/33 (63%)
Query: 45 AVVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
AV+ +QA VR + ARRR + A +IQ+ WR
Sbjct: 929 AVITIQAGVRGYLARRRIRLWHRGAMVIQATWR 961
Score = 29.3 bits (64), Expect = 0.71
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 42 QEWAVVKVQAQVRMWQARRRFLQARQAACIIQSHWRWHASQT 83
Q+ A +Q+ R ++ R++ Q + AA I+Q+ WR H +++
Sbjct: 1113 QDKAATAIQSAWRGFKIRQQMRQQQMAAKIVQATWRGHHTRS 1154
>gi|156119615 myosin IXA [Homo sapiens]
Length = 2548
Score = 30.4 bits (67), Expect = 0.32
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 46 VVKVQAQVRMWQARRRFLQARQAACIIQSHWRWHASQ 82
++ +Q R+ R+ FL RQA+ IIQ WR + +Q
Sbjct: 1023 IILLQRWFRVLLCRQHFLHLRQASVIIQRFWRNYLNQ 1059
Score = 30.0 bits (66), Expect = 0.42
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 1 MVRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARR 60
+ R+ L + +IQ +WR+ + + + + A + +QA R R+
Sbjct: 1034 LCRQHFLHLRQASVIIQRFWRNYLNQKQVRDAAVQKDAFVMASAAAL-LQASWRAHLERQ 1092
Query: 61 RFLQARQAACIIQSHWR 77
R+L+ R AA +IQ WR
Sbjct: 1093 RYLELRAAAIVIQQKWR 1109
Score = 27.7 bits (60), Expect = 2.1
Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 2 VRRTLLQAALRAWVIQCWWRSMQAKMLEQRRRLALR---LYTCQEW---------AVVKV 49
V++ A A ++Q WR+ LE++R L LR + Q+W A + +
Sbjct: 1067 VQKDAFVMASAAALLQASWRAH----LERQRYLELRAAAIVIQQKWRDYYRRRHMAAICI 1122
Query: 50 QAQVRMWQARRRFLQARQAACIIQSHWRWHASQTRGLIRGHYEVRASRLELDI 102
QA+ + ++ +R+ + R+ ++QS R ++ R +R ++ E+ +
Sbjct: 1123 QARWKAYRESKRYQEQRKKIILLQSTCRGFRARQRFKALKEQRLRETKPEVGL 1175
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 30.4 bits (67), Expect = 0.32
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 23/90 (25%)
Query: 15 VIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQS 74
++Q W+R + LE+R L ++ A V +QA R ++ RR L+ QAA +Q+
Sbjct: 962 LLQSWFRMV----LERRHFLQMKR------AAVTIQACWRSYRVRRA-LERTQAAVYLQA 1010
Query: 75 HWR--W------HASQT----RGLIRGHYE 92
WR W H Q+ + L RGH +
Sbjct: 1011 SWRGYWQRKLYRHQKQSIIRLQSLCRGHLQ 1040
Score = 30.0 bits (66), Expect = 0.42
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 46 VVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
++ +Q+ RM RR FLQ ++AA IQ+ WR
Sbjct: 960 ILLLQSWFRMVLERRHFLQMKRAAVTIQACWR 991
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 30.4 bits (67), Expect = 0.32
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 23/90 (25%)
Query: 15 VIQCWWRSMQAKMLEQRRRLALRLYTCQEWAVVKVQAQVRMWQARRRFLQARQAACIIQS 74
++Q W+R + LE+R L ++ A V +QA R ++ RR L+ QAA +Q+
Sbjct: 962 LLQSWFRMV----LERRHFLQMKR------AAVTIQACWRSYRVRRA-LERTQAAVYLQA 1010
Query: 75 HWR--W------HASQT----RGLIRGHYE 92
WR W H Q+ + L RGH +
Sbjct: 1011 SWRGYWQRKLYRHQKQSIIRLQSLCRGHLQ 1040
Score = 30.0 bits (66), Expect = 0.42
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 46 VVKVQAQVRMWQARRRFLQARQAACIIQSHWR 77
++ +Q+ RM RR FLQ ++AA IQ+ WR
Sbjct: 960 ILLLQSWFRMVLERRHFLQMKRAAVTIQACWR 991
>gi|19923615 myosin head domain containing 1 isoform 1 [Homo
sapiens]
Length = 770
Score = 30.0 bits (66), Expect = 0.42
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 12 RAWVIQCWWRSMQAKMLEQRRRLALRLYTCQEW-AVVKVQAQVRMWQARRRFLQARQAAC 70
RA V++ R +Q R R R +W AV+ +QA +R W R+ + AA
Sbjct: 557 RARVLEQCARCIQGGWRRHRHREQER-----QWRAVMLIQAAIRSWLTRKHIQRLHAAAT 611
Query: 71 IIQSHWR 77
+I+ W+
Sbjct: 612 VIKRAWQ 618
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.333 0.132 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,347,920
Number of Sequences: 37866
Number of extensions: 106374
Number of successful extensions: 612
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 503
Number of HSP's gapped (non-prelim): 109
length of query: 107
length of database: 18,247,518
effective HSP length: 77
effective length of query: 30
effective length of database: 15,331,836
effective search space: 459955080
effective search space used: 459955080
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.