Guide to the Human Genome
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Name: MYO9A Sequence: fasta or formatted (2548aa) NCBI GI: 156119615
Description:

myosin IXA

Referenced in:

Myosin
Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4        138           3
 C cysteine            1.6         42           2
 D aspartate           5.0        127           2
 E glutamate           8.1        206           2
 F phenylalanine       4.0        103           2
 G glycine             4.1        104           2
 H histidine           2.5         63           2
 I isoleucine          5.2        133           2
 K lysine              8.2        209           4
 L leucine            10.2        261           2
 M methionine          2.0         51           2
 N asparagine          4.6        118           3
 P proline             4.2        107           2
 Q glutamine           5.3        136           3
 R arginine            6.8        174           3
 S serine              9.0        230           3
 T threonine           4.9        125           3
 V valine              5.0        127           3
 W tryptophan          0.8         21           1
 Y tyrosine            2.9         73           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin IXA 
MYO9B                 0.234   myosin IXB isoform 2 
MYO9B                 0.234   myosin IXB isoform 1 
MYO15A                0.086   myosin XV 
MYO7A                 0.083   myosin VIIA isoform 2 
MYO7A                 0.083   myosin VIIA isoform 3 
MYO7A                 0.083   myosin VIIA isoform 1 
MYO7B                 0.082   myosin VIIB 
MYO10                 0.082   myosin X 
MYO3B                 0.077   myosin IIIB isoform 1 
MYO3B                 0.077   myosin IIIB isoform 2 
MYO3A                 0.077   myosin IIIA 
MYO6                  0.074   myosin VI 
MYO5B                 0.073   myosin VB 
MYO5C                 0.072   myosin VC 
MYO5A                 0.071   myosin VA isoform 2 
MYO5A                 0.071   myosin VA isoform 1 
MYO1F                 0.069   myosin IF 
MYO1B                 0.068   myosin IB isoform 1 
MYO1B                 0.068   myosin IB isoform 2 
MYO1B                 0.068   myosin IB isoform 1 
MYH11                 0.068   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.068   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH11                 0.067   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.067   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYO1A                 0.067   myosin IA 
MYH9                  0.066   myosin, heavy polypeptide 9, non-muscle 
MYO1D                 0.066   myosin ID 
MYH10                 0.065   myosin, heavy polypeptide 10, non-muscle 
MYO1C                 0.065   myosin IC isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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