Guide to the Human Genome
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Name: MYO7A Sequence: fasta or formatted (2175aa) NCBI GI: 189083802
Description:

myosin VIIA isoform 2

Referenced in:

Cadherins and Related Proteins
Auditory and Vestibular Functions
Myosin
PDZ Domain

Other entries for this name:
alt prot [2215aa] myosin VIIA isoform 1
alt prot [1204aa] myosin VIIA isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5        142           2
 C cysteine            1.4         31           2
 D aspartate           5.3        115           2
 E glutamate           7.4        160           3
 F phenylalanine       4.8        104           3
 G glycine             5.3        115           2
 H histidine           2.8         61           2
 I isoleucine          5.5        120           2
 K lysine              7.3        158           3
 L leucine            10.6        230           3
 M methionine          2.3         50           2
 N asparagine          3.4         75           2
 P proline             4.5         97           3
 Q glutamine           4.8        104           2
 R arginine            6.7        145           2
 S serine              6.1        132           3
 T threonine           5.3        116           3
 V valine              5.2        114           2
 W tryptophan          1.2         27           1
 Y tyrosine            3.6         79           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin VIIA isoform 2 
MYO7A                 0.994   myosin VIIA isoform 1 
MYO7A                 0.534   myosin VIIA isoform 3 
MYO7B                 0.519   myosin VIIB 
MYO10                 0.143   myosin X 
MYO5A                 0.128   myosin VA isoform 2 
MYO5A                 0.128   myosin VA isoform 1 
MYO15A                0.126   myosin XV 
MYO5B                 0.124   myosin VB 
MYO5C                 0.121   myosin VC 
MYO1B                 0.115   myosin IB isoform 1 
MYO1B                 0.115   myosin IB isoform 1 
MYO1B                 0.112   myosin IB isoform 2 
MYO3A                 0.111   myosin IIIA 
MYO3B                 0.110   myosin IIIB isoform 2 
MYO1C                 0.110   myosin IC isoform b 
MYO1C                 0.110   myosin IC isoform a 
MYO1C                 0.110   myosin IC isoform c 
MYH9                  0.110   myosin, heavy polypeptide 9, non-muscle 
MYH10                 0.110   myosin, heavy polypeptide 10, non-muscle 
MYH11                 0.108   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.108   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYO3B                 0.108   myosin IIIB isoform 1 
MYH11                 0.108   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.108   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH7B                 0.107   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH3                  0.107   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH15                 0.106   myosin, heavy polypeptide 15 
MYH7                  0.105   myosin, heavy chain 7, cardiac muscle, beta 
MYO1A                 0.105   myosin IA 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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