Guide to the Human Genome
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Name: MYO1H Sequence: fasta or formatted (1022aa) NCBI GI: 254028267
Description:

myosin 1H

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         58           2
 C cysteine            1.9         19           1
 D aspartate           4.0         41           2
 E glutamate           8.1         83           3
 F phenylalanine       5.0         51           2
 G glycine             6.1         62           2
 H histidine           2.4         25           1
 I isoleucine          7.2         74           2
 K lysine              8.4         86           2
 L leucine            10.3        105           2
 M methionine          1.4         14           2
 N asparagine          4.4         45           2
 P proline             3.4         35           2
 Q glutamine           3.9         40           2
 R arginine            6.7         68           3
 S serine              5.3         54           2
 T threonine           4.2         43           1
 V valine              6.4         65           2
 W tryptophan          1.0         10           1
 Y tyrosine            4.3         44           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin 1H 
MYO1C                 0.621   myosin IC isoform b 
MYO1C                 0.621   myosin IC isoform a 
MYO1C                 0.621   myosin IC isoform c 
MYO1B                 0.361   myosin IB isoform 2 
MYO1A                 0.341   myosin IA 
MYO1B                 0.337   myosin IB isoform 1 
MYO1B                 0.337   myosin IB isoform 1 
MYO1D                 0.316   myosin ID 
MYO1G                 0.289   myosin IG 
MYO1F                 0.281   myosin IF 
MYO1E                 0.275   myosin IE 
MYO10                 0.221   myosin X 
MYO7A                 0.221   myosin VIIA isoform 2 
MYO7A                 0.221   myosin VIIA isoform 3 
MYO7A                 0.221   myosin VIIA isoform 1 
MYO7B                 0.218   myosin VIIB 
MYO15A                0.214   myosin XV 
MYO5A                 0.213   myosin VA isoform 2 
MYO5A                 0.213   myosin VA isoform 1 
MYO5C                 0.213   myosin VC 
MYO5B                 0.210   myosin VB 
MYH7                  0.207   myosin, heavy chain 7, cardiac muscle, beta 
MYH10                 0.202   myosin, heavy polypeptide 10, non-muscle 
MYH11                 0.199   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.199   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH6                  0.199   myosin heavy chain 6 
MYH11                 0.199   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.199   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH9                  0.199   myosin, heavy polypeptide 9, non-muscle 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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