Guide to the Human Genome
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Name: KIAA1683 Sequence: fasta or formatted (1180aa) NCBI GI: 54606862
Description:

KIAA1683 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {1367aa} KIAA1683 isoform a
alt prot {1134aa} KIAA1683 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.3        133           3
 C cysteine            2.6         31           1
 D aspartate           2.2         26           1
 E glutamate           3.1         37           2
 F phenylalanine       0.9         11           1
 G glycine             5.8         68           2
 H histidine           3.6         43           2
 I isoleucine          3.1         37           2
 K lysine              5.1         60           2
 L leucine             6.7         79           2
 M methionine          3.0         35           2
 N asparagine          2.0         24           1
 P proline            10.3        122           2
 Q glutamine           7.3         86           3
 R arginine            6.9         81           3
 S serine              7.4         87           2
 T threonine           9.1        107           3
 V valine              6.8         80           2
 W tryptophan          1.8         21           1
 Y tyrosine            1.0         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIAA1683 isoform b 
KIAA1683              0.961   KIAA1683 isoform c 
KIAA1683              0.738   KIAA1683 isoform a 
LOC100133756          0.030   PREDICTED: hypothetical protein, partial 
PRG4                  0.026   proteoglycan 4 isoform D 
PRG4                  0.026   proteoglycan 4 isoform C 
PRG4                  0.026   proteoglycan 4 isoform B 
PRG4                  0.026   proteoglycan 4 isoform A 
MUC2                  0.021   mucin 2 precursor 
LOC100294420          0.017   PREDICTED: similar to mucin 2 
RAPH1                 0.017   Ras association and pleckstrin homology domains 1 is...
MUC5B                 0.015   mucin 5, subtype B, tracheobronchial 
FLJ22184              0.015   PREDICTED: hypothetical protein FLJ22184 
NACA                  0.015   nascent polypeptide-associated complex alpha subuni...
MUC17                 0.015   mucin 17 
COL27A1               0.014   collagen, type XXVII, alpha 1 
MUC6                  0.014   mucin 6, gastric 
MUC5AC                0.014   mucin 5AC 
LOC732156             0.013   PREDICTED: similar to Mucin-3A 
MUC7                  0.012   mucin 7, secreted precursor 
MUC7                  0.012   mucin 7, secreted precursor 
MUC7                  0.012   mucin 7, secreted precursor 
LOC100128719          0.012   PREDICTED: hypothetical protein, partial 
LOC100128719          0.012   PREDICTED: hypothetical protein, partial 
LOC284297             0.011   hypothetical protein LOC284297 
FLJ22184              0.011   PREDICTED: hypothetical protein FLJ22184 
BCORL1                0.011   BCL6 co-repressor-like 1 
BAT2D1                0.011   HBxAg transactivated protein 2 
POM121C               0.011   POM121 membrane glycoprotein (rat)-like 
FLJ22184              0.011   PREDICTED: hypothetical protein LOC80164 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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