Guide to the Human Genome
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Name: MYO1C Sequence: fasta or formatted (1044aa) NCBI GI: 124494247
Description:

myosin IC isoform b

Referenced in:

Myosin

Other entries for this name:
alt prot [1063aa] myosin IC isoform a
alt prot [1028aa] myosin IC isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         74           2
 C cysteine            1.3         14           1
 D aspartate           4.2         44           1
 E glutamate           7.2         75           3
 F phenylalanine       4.5         47           2
 G glycine             5.5         57           2
 H histidine           2.2         23           2
 I isoleucine          4.7         49           2
 K lysine              6.2         65           2
 L leucine            11.1        116           3
 M methionine          1.0         10           1
 N asparagine          4.1         43           2
 P proline             4.0         42           3
 Q glutamine           4.7         49           2
 R arginine            8.6         90           3
 S serine              6.5         68           2
 T threonine           5.3         55           2
 V valine              7.0         73           2
 W tryptophan          1.3         14           2
 Y tyrosine            3.4         36           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin IC isoform b 
MYO1C                 0.994   myosin IC isoform a 
MYO1C                 0.985   myosin IC isoform c 
MYO1H                 0.613   myosin 1H 
MYO1B                 0.378   myosin IB isoform 2 
MYO1A                 0.371   myosin IA 
MYO1B                 0.349   myosin IB isoform 1 
MYO1B                 0.349   myosin IB isoform 1 
MYO1D                 0.327   myosin ID 
MYO1G                 0.308   myosin IG 
MYO1F                 0.285   myosin IF 
MYO1E                 0.283   myosin IE 
MYO7B                 0.238   myosin VIIB 
MYO7A                 0.233   myosin VIIA isoform 2 
MYO7A                 0.233   myosin VIIA isoform 3 
MYO7A                 0.233   myosin VIIA isoform 1 
MYO10                 0.223   myosin X 
MYO5C                 0.221   myosin VC 
MYO15A                0.215   myosin XV 
MYO5A                 0.208   myosin VA isoform 2 
MYO5A                 0.208   myosin VA isoform 1 
MYO5B                 0.207   myosin VB 
MYH7                  0.204   myosin, heavy chain 7, cardiac muscle, beta 
MYH6                  0.204   myosin heavy chain 6 
MYH10                 0.199   myosin, heavy polypeptide 10, non-muscle 
MYH14                 0.199   myosin, heavy chain 14 isoform 2 
MYH3                  0.197   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH14                 0.197   myosin, heavy chain 14 isoform 1 
MYH11                 0.196   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.196   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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