Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MYO7B Sequence: fasta or formatted (2116aa) NCBI GI: 122937512
Description:

myosin VIIB

Referenced in:

Myosin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4        156           2
 C cysteine            1.8         38           2
 D aspartate           4.4         94           2
 E glutamate           6.7        141           3
 F phenylalanine       4.5         96           3
 G glycine             5.4        114           2
 H histidine           2.9         61           1
 I isoleucine          5.1        108           2
 K lysine              5.9        125           2
 L leucine            11.5        244           3
 M methionine          2.4         51           2
 N asparagine          3.2         67           2
 P proline             4.9        103           2
 Q glutamine           5.9        124           2
 R arginine            6.5        138           2
 S serine              6.5        137           2
 T threonine           4.8        101           2
 V valine              5.6        118           3
 W tryptophan          1.6         33           2
 Y tyrosine            3.2         67           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin VIIB 
MYO7A                 0.533   myosin VIIA isoform 2 
MYO7A                 0.532   myosin VIIA isoform 1 
MYO7A                 0.281   myosin VIIA isoform 3 
MYO15A                0.139   myosin XV 
MYO10                 0.135   myosin X 
MYO5A                 0.129   myosin VA isoform 2 
MYO5A                 0.129   myosin VA isoform 1 
MYO5C                 0.124   myosin VC 
MYO5B                 0.121   myosin VB 
MYO3B                 0.117   myosin IIIB isoform 2 
MYO1C                 0.115   myosin IC isoform b 
MYO1C                 0.115   myosin IC isoform a 
MYO1C                 0.115   myosin IC isoform c 
MYO1B                 0.113   myosin IB isoform 1 
MYO1B                 0.113   myosin IB isoform 1 
MYO3B                 0.113   myosin IIIB isoform 1 
MYO1B                 0.112   myosin IB isoform 2 
MYO3A                 0.110   myosin IIIA 
MYH11                 0.108   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.108   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH11                 0.108   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.108   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH9                  0.108   myosin, heavy polypeptide 9, non-muscle 
MYH10                 0.108   myosin, heavy polypeptide 10, non-muscle 
MYH7B                 0.107   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH15                 0.106   myosin, heavy polypeptide 15 
MYO1F                 0.106   myosin IF 
MYO1H                 0.104   myosin 1H 
MYO1A                 0.104   myosin IA 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press