Guide to the Human Genome
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Name: IQCF2 Sequence: fasta or formatted (164aa) NCBI GI: 44662817
Description:

IQ motif containing F2

Referenced in:

Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.5         14           2
 C cysteine            4.3          7           1
 D aspartate           0.6          1           1
 E glutamate           4.9          8           2
 F phenylalanine       1.2          2           1
 G glycine             2.4          4           1
 H histidine           3.7          6           1
 I isoleucine         10.4         17           2
 K lysine              7.9         13           3
 L leucine            10.4         17           2
 M methionine          1.8          3           1
 N asparagine          2.4          4           1
 P proline             0.0          0           0
 Q glutamine           7.9         13           2
 R arginine           10.4         17           2
 S serine              2.4          4           1
 T threonine           6.1         10           1
 V valine              7.3         12           2
 W tryptophan          5.5          9           2
 Y tyrosine            1.8          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   IQ motif containing F2 
IQCF1                 0.416   IQ motif containing F1 
IQCF5                 0.371   IQ motif containing F5 
IQCF3                 0.308   IQ motif containing F3 
IQCF6                 0.286   IQ motif containing F6 
SPATA17               0.057   spermatogenesis associated 17 
IQCG                  0.054   IQ motif containing G 
IQCG                  0.054   IQ motif containing G 
ASPM                  0.054   asp (abnormal spindle)-like, microcephaly associate...
MYO5A                 0.048   myosin VA isoform 2 
MYO5A                 0.048   myosin VA isoform 1 
MYO1C                 0.048   myosin IC isoform b 
MYO1C                 0.048   myosin IC isoform a 
MYO1C                 0.048   myosin IC isoform c 
MYO9A                 0.044   myosin IXA 
MYO9B                 0.044   myosin IXB isoform 2 
MYO9B                 0.044   myosin IXB isoform 1 
MYO7A                 0.038   myosin VIIA isoform 2 
MYO7A                 0.038   myosin VIIA isoform 3 
MYO7A                 0.038   myosin VIIA isoform 1 
MYO7B                 0.038   myosin VIIB 
SFI1                  0.035   spindle assembly associated Sfi1 homolog isoform a [...
SFI1                  0.035   spindle assembly associated Sfi1 homolog isoform b [...
IQGAP3                0.035   IQ motif containing GTPase activating protein 3 [Hom...
IQGAP2                0.035   IQ motif containing GTPase activating protein 2 [Ho...
KIAA1683              0.035   KIAA1683 isoform a 
KIAA1683              0.035   KIAA1683 isoform c 
KIAA1683              0.035   KIAA1683 isoform b 
LRRIQ4                0.032   leucine-rich repeats and IQ motif containing 4 [Hom...
LRRIQ1                0.025   leucine-rich repeats and IQ motif containing 1 isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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