Guide to the Human Genome
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Name: MYO7A Sequence: fasta or formatted (1204aa) NCBI GI: 189083800
Description:

myosin VIIA isoform 3

Referenced in:

Cadherins and Related Proteins
Auditory and Vestibular Functions
Myosin
PDZ Domain

Other entries for this name:
alt prot [2215aa] myosin VIIA isoform 1
alt prot [2175aa] myosin VIIA isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         85           2
 C cysteine            1.6         19           2
 D aspartate           5.1         61           2
 E glutamate           7.9         95           3
 F phenylalanine       4.1         49           2
 G glycine             5.7         69           2
 H histidine           3.4         41           2
 I isoleucine          5.8         70           2
 K lysine              6.6         80           3
 L leucine            11.1        134           2
 M methionine          2.8         34           2
 N asparagine          3.9         47           2
 P proline             3.4         41           2
 Q glutamine           5.2         63           2
 R arginine            7.6         91           2
 S serine              5.5         66           2
 T threonine           4.3         52           3
 V valine              4.6         55           2
 W tryptophan          1.2         14           2
 Y tyrosine            3.2         38           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myosin VIIA isoform 3 
MYO7A                 0.970   myosin VIIA isoform 2 
MYO7A                 0.970   myosin VIIA isoform 1 
MYO7B                 0.498   myosin VIIB 
MYO10                 0.259   myosin X 
MYO5A                 0.232   myosin VA isoform 2 
MYO5A                 0.232   myosin VA isoform 1 
MYO15A                0.229   myosin XV 
MYO5B                 0.226   myosin VB 
MYO5C                 0.221   myosin VC 
MYO1B                 0.209   myosin IB isoform 1 
MYO1B                 0.209   myosin IB isoform 1 
MYO1B                 0.204   myosin IB isoform 2 
MYO3A                 0.201   myosin IIIA 
MYO3B                 0.201   myosin IIIB isoform 2 
MYO1C                 0.200   myosin IC isoform b 
MYO1C                 0.200   myosin IC isoform a 
MYO1C                 0.200   myosin IC isoform c 
MYH9                  0.200   myosin, heavy polypeptide 9, non-muscle 
MYH10                 0.199   myosin, heavy polypeptide 10, non-muscle 
MYH11                 0.197   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.197   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYO3B                 0.196   myosin IIIB isoform 1 
MYH11                 0.196   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.196   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH7B                 0.195   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH3                  0.194   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH15                 0.194   myosin, heavy polypeptide 15 
MYH7                  0.191   myosin, heavy chain 7, cardiac muscle, beta 
MYO1A                 0.191   myosin IA 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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