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Search of human proteins with 253970506
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo
sapiens]
(354 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo s... 737 0.0
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap... 679 0.0
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s... 679 0.0
gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo s... 672 0.0
gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo s... 421 e-118
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma... 146 2e-35
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens] 89 5e-18
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens] 86 7e-17
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 79 6e-15
gi|5454064 RNA binding motif protein 14 [Homo sapiens] 74 2e-13
gi|62122917 filaggrin family member 2 [Homo sapiens] 72 6e-13
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 69 5e-12
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 69 5e-12
gi|57864582 hornerin [Homo sapiens] 69 6e-12
gi|212549553 interleukin enhancer binding factor 3 isoform d [Ho... 60 4e-09
gi|24234750 interleukin enhancer binding factor 3 isoform a [Hom... 60 4e-09
gi|33946327 nucleoporin 214kDa [Homo sapiens] 58 1e-08
gi|238859557 regulatory factor X1 [Homo sapiens] 57 3e-08
gi|26667219 eyes absent 1 isoform c [Homo sapiens] 56 4e-08
gi|56117846 synovial sarcoma translocation, chromosome 18 isofor... 55 1e-07
gi|19923100 eyes absent 1 isoform b [Homo sapiens] 55 1e-07
gi|26667216 eyes absent 1 isoform b [Homo sapiens] 55 1e-07
gi|26667222 eyes absent 1 isoform a [Homo sapiens] 55 1e-07
gi|6631075 BCL2-associated athanogene 4 [Homo sapiens] 55 1e-07
gi|56699409 RNA binding motif protein, X-linked [Homo sapiens] 55 1e-07
gi|34101286 zinc finger RNA binding protein [Homo sapiens] 55 1e-07
gi|151301154 mucin 6, gastric [Homo sapiens] 54 2e-07
gi|56117844 synovial sarcoma translocation, chromosome 18 isofor... 53 4e-07
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 53 4e-07
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 53 4e-07
>gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo
sapiens]
Length = 354
Score = 737 bits (1903), Expect = 0.0
Identities = 354/354 (100%), Positives = 354/354 (100%)
Query: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT 60
MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
Sbjct: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT 60
Query: 61 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT 120
YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
Sbjct: 61 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT 120
Query: 121 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
Sbjct: 121 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
Query: 181 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY 240
MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
Sbjct: 181 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY 240
Query: 241 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR 300
PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
Sbjct: 241 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR 300
Query: 301 GRGRGGFDRGGMSRGGRGGGRGGMGLQSESLVYTSILKKYPYSVLSRQHNEKWD 354
GRGRGGFDRGGMSRGGRGGGRGGMGLQSESLVYTSILKKYPYSVLSRQHNEKWD
Sbjct: 301 GRGRGGFDRGGMSRGGRGGGRGGMGLQSESLVYTSILKKYPYSVLSRQHNEKWD 354
>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
sapiens]
Length = 656
Score = 679 bits (1753), Expect = 0.0
Identities = 326/329 (99%), Positives = 326/329 (99%)
Query: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT 60
MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
Sbjct: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT 60
Query: 61 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT 120
YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
Sbjct: 61 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT 120
Query: 121 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
Sbjct: 121 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
Query: 181 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY 240
MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
Sbjct: 181 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY 240
Query: 241 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR 300
PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
Sbjct: 241 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR 300
Query: 301 GRGRGGFDRGGMSRGGRGGGRGGMGLQSE 329
GRGRGGFDRGGMSRGGRGGGRGGMG E
Sbjct: 301 GRGRGGFDRGGMSRGGRGGGRGGMGSAGE 329
Score = 47.8 bits (112), Expect = 2e-05
Identities = 93/359 (25%), Positives = 134/359 (37%), Gaps = 71/359 (19%)
Query: 16 QGYSAYTAQPTQGYAQTTQ-AYGQQSYG---TYGQPTDVSYTQAQTTATYGQTAYATSYG 71
Q +A + P Y+ T +Y Q SY TYGQP+ SY Q ++YGQ + SYG
Sbjct: 182 QPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPS--SYGQQ---SSYGQQS---SYG 233
Query: 72 Q-PPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQ--PAYPAYG 128
Q PPT Y PQ TG+Y + + +SY QS++ + YG
Sbjct: 234 QQPPTSYP----PQ----------TGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYG 279
Query: 129 QQPAA-TAPTRPQDGNKPTETSQPQSS--TGGYNQPSLGYGQSNYSYPQVPGSY--PMQP 183
Q+ + P + + P + + GG ++ G G+ G + P P
Sbjct: 280 QESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGSAGERGGFNKPGGP 339
Query: 184 VTAPPSY---PPTSYSSTQPTS--YDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQP-- 236
+ P PP S Y Q + T + + +Q + + QP
Sbjct: 340 MDEGPDLDLGPPVDPDEDSDNSAIYVQG-LNDSVTLDDLADFFKQCGVVKMNKRTGQPMI 398
Query: 237 ------PTSYPP--QTGSYSQAPSQYSQ---------QSSSYGQQSSFRQDHPSSM--GV 277
T P T SY P+ + Q S + ++ +SM G+
Sbjct: 399 HIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGL 458
Query: 278 YGQESGGF-----SGPGENRSMSGPDNRGRGRGGFDRGGM----SRGGRGGGRGGMGLQ 327
+E G GPG GP R GRGG DRGG RG RG GG +Q
Sbjct: 459 PPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGG-DRGGFPPRGPRGSRGNPSGGGNVQ 516
Score = 42.7 bits (99), Expect = 5e-04
Identities = 24/43 (55%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 285 FSGPGENRSMSGPDNRGRGRGG-FDR---GGMSRGGRGGGRGG 323
F PG +R GP GRGG DR GGM RGGRGG RGG
Sbjct: 556 FPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG 598
Score = 36.2 bits (82), Expect = 0.046
Identities = 22/47 (46%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 279 GQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG 325
G G G G GP RG G DRGG RGGRG RGG G
Sbjct: 566 GGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGF-RGGRGMDRGGFG 611
Score = 30.8 bits (68), Expect = 1.9
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 276 GVYGQESGGF-SGPGENRSMSGPDNRGRGRGGFDRGGMSR-GGRGGGRGGMG 325
G G + GGF G G +R G RG G GG M + GGR GGRGG G
Sbjct: 590 GGRGGDRGGFRGGRGMDRGGFGGGRRG-GPGGPPGPLMEQMGGRRGGRGGPG 640
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/39 (53%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 287 GPGEN-RSMSGPDNRG-RGRGGFDRGGMSRGGRGGGRGG 323
GPG R G D G RG G DRGG GGR GG GG
Sbjct: 583 GPGGMFRGGRGGDRGGFRGGRGMDRGGFG-GGRRGGPGG 620
>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
sapiens]
Length = 655
Score = 679 bits (1751), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT 60
MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
Sbjct: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT 60
Query: 61 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT 120
YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
Sbjct: 61 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT 120
Query: 121 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP
Sbjct: 121 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
Query: 181 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY 240
MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY
Sbjct: 181 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY 240
Query: 241 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR 300
PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR
Sbjct: 241 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR 300
Query: 301 GRGRGGFDRGGMSRGGRGGGRGGMG 325
GRGRGGFDRGGMSRGGRGGGRGGMG
Sbjct: 301 GRGRGGFDRGGMSRGGRGGGRGGMG 325
Score = 48.5 bits (114), Expect = 9e-06
Identities = 91/354 (25%), Positives = 129/354 (36%), Gaps = 62/354 (17%)
Query: 16 QGYSAYTAQPTQGYAQTTQ-AYGQQSYG---TYGQPTDVSYTQAQTTATYGQTAYATSYG 71
Q +A + P Y+ T +Y Q SY TYGQP+ SY Q ++YGQ + SYG
Sbjct: 182 QPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPS--SYGQQ---SSYGQQS---SYG 233
Query: 72 Q-PPTGYTTPT-----APQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPA-Y 124
Q PPT Y T AP YSQ YG + + Q ++ YG + +
Sbjct: 234 QQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQS--------SFRQDHPSSMGVYGQESGGF 285
Query: 125 PAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSYPMQP 183
G+ + + P G + G + +G G+ ++ P P
Sbjct: 286 SGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDL 345
Query: 184 VTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQP------- 236
PP P S Y Q + T + + +Q + + QP
Sbjct: 346 DLGPPVDPDED--SDNSAIYVQG-LNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLD 402
Query: 237 -PTSYPP--QTGSYSQAPSQYSQ---------QSSSYGQQSSFRQDHPSSM--GVYGQES 282
T P T SY P+ + Q S + ++ +SM G+ +E
Sbjct: 403 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREG 462
Query: 283 GGF-----SGPGENRSMSGPDNRGRGRGGFDRGGM----SRGGRGGGRGGMGLQ 327
G GPG GP R GRGG DRGG RG RG GG +Q
Sbjct: 463 RGMPPPLRGGPGGPGGPGGPMGRMGGRGG-DRGGFPPRGPRGSRGNPSGGGNVQ 515
Score = 42.7 bits (99), Expect = 5e-04
Identities = 24/43 (55%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 285 FSGPGENRSMSGPDNRGRGRGG-FDR---GGMSRGGRGGGRGG 323
F PG +R GP GRGG DR GGM RGGRGG RGG
Sbjct: 555 FPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG 597
Score = 36.2 bits (82), Expect = 0.046
Identities = 22/47 (46%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 279 GQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG 325
G G G G GP RG G DRGG RGGRG RGG G
Sbjct: 565 GGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGF-RGGRGMDRGGFG 610
Score = 30.8 bits (68), Expect = 1.9
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 276 GVYGQESGGF-SGPGENRSMSGPDNRGRGRGGFDRGGMSR-GGRGGGRGGMG 325
G G + GGF G G +R G RG G GG M + GGR GGRGG G
Sbjct: 589 GGRGGDRGGFRGGRGMDRGGFGGGRRG-GPGGPPGPLMEQMGGRRGGRGGPG 639
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/39 (53%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 287 GPGEN-RSMSGPDNRG-RGRGGFDRGGMSRGGRGGGRGG 323
GPG R G D G RG G DRGG GGR GG GG
Sbjct: 582 GPGGMFRGGRGGDRGGFRGGRGMDRGGFG-GGRRGGPGG 619
>gi|253970500 Ewing sarcoma breakpoint region 1 isoform 1 [Homo
sapiens]
Length = 661
Score = 672 bits (1734), Expect = 0.0
Identities = 325/331 (98%), Positives = 325/331 (98%), Gaps = 6/331 (1%)
Query: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT 60
MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
Sbjct: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT 60
Query: 61 YGQTAYATSYGQPPT------GYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAA 114
YGQTAYATSYGQPPT GYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAA
Sbjct: 61 YGQTAYATSYGQPPTVEGTSTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAA 120
Query: 115 QSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQ 174
QSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQ
Sbjct: 121 QSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQ 180
Query: 175 VPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQ 234
VPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQ
Sbjct: 181 VPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQ 240
Query: 235 QPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSM 294
QPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSM
Sbjct: 241 QPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSM 300
Query: 295 SGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG 325
SGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG
Sbjct: 301 SGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG 331
Score = 48.5 bits (114), Expect = 9e-06
Identities = 91/354 (25%), Positives = 129/354 (36%), Gaps = 62/354 (17%)
Query: 16 QGYSAYTAQPTQGYAQTTQ-AYGQQSYG---TYGQPTDVSYTQAQTTATYGQTAYATSYG 71
Q +A + P Y+ T +Y Q SY TYGQP+ SY Q ++YGQ + SYG
Sbjct: 188 QPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPS--SYGQQ---SSYGQQS---SYG 239
Query: 72 Q-PPTGYTTPT-----APQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPA-Y 124
Q PPT Y T AP YSQ YG + + Q ++ YG + +
Sbjct: 240 QQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQS--------SFRQDHPSSMGVYGQESGGF 291
Query: 125 PAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQ-SNYSYPQVPGSYPMQP 183
G+ + + P G + G + +G G+ ++ P P
Sbjct: 292 SGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGAGERGGFNKPGGPMDEGPDL 351
Query: 184 VTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQP------- 236
PP P S Y Q + T + + +Q + + QP
Sbjct: 352 DLGPPVDPDED--SDNSAIYVQG-LNDSVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLD 408
Query: 237 -PTSYPP--QTGSYSQAPSQYSQ---------QSSSYGQQSSFRQDHPSSM--GVYGQES 282
T P T SY P+ + Q S + ++ +SM G+ +E
Sbjct: 409 KETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGLPPREG 468
Query: 283 GGF-----SGPGENRSMSGPDNRGRGRGGFDRGGM----SRGGRGGGRGGMGLQ 327
G GPG GP R GRGG DRGG RG RG GG +Q
Sbjct: 469 RGMPPPLRGGPGGPGGPGGPMGRMGGRGG-DRGGFPPRGPRGSRGNPSGGGNVQ 521
Score = 42.7 bits (99), Expect = 5e-04
Identities = 24/43 (55%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 285 FSGPGENRSMSGPDNRGRGRGG-FDR---GGMSRGGRGGGRGG 323
F PG +R GP GRGG DR GGM RGGRGG RGG
Sbjct: 561 FPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG 603
Score = 36.2 bits (82), Expect = 0.046
Identities = 22/47 (46%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 279 GQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG 325
G G G G GP RG G DRGG RGGRG RGG G
Sbjct: 571 GGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGF-RGGRGMDRGGFG 616
Score = 30.8 bits (68), Expect = 1.9
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 276 GVYGQESGGF-SGPGENRSMSGPDNRGRGRGGFDRGGMSR-GGRGGGRGGMG 325
G G + GGF G G +R G RG G GG M + GGR GGRGG G
Sbjct: 595 GGRGGDRGGFRGGRGMDRGGFGGGRRG-GPGGPPGPLMEQMGGRRGGRGGPG 645
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/39 (53%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 287 GPGEN-RSMSGPDNRG-RGRGGFDRGGMSRGGRGGGRGG 323
GPG R G D G RG G DRGG GGR GG GG
Sbjct: 588 GPGGMFRGGRGGDRGGFRGGRGMDRGGFG-GGRRGGPGG 625
>gi|253970504 Ewing sarcoma breakpoint region 1 isoform 4 [Homo
sapiens]
Length = 600
Score = 421 bits (1081), Expect = e-118
Identities = 235/331 (70%), Positives = 239/331 (72%), Gaps = 60/331 (18%)
Query: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT 60
MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT
Sbjct: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTAT 60
Query: 61 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT 120
YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT
Sbjct: 61 YGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT 120
Query: 121 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQ-SSTGGYNQPSLGYGQSNYSYPQVPGSY 179
QPAYPAYGQQPAATAPT +PT Q S Y QPS YGQ + SY Q SY
Sbjct: 121 QPAYPAYGQQPAATAPT-SYSSTQPTSYDQSSYSQQNTYGQPS-SYGQQS-SYGQ-QSSY 176
Query: 180 PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQ-SSYGQQSSYGQQPPT 238
QP P SYPP + SYSQ PS Y QQ SSYGQQSS+ Q
Sbjct: 177 GQQP---PTSYPPQT-----------GSYSQ-----APSQYSQQSSSYGQQSSFRQ---- 213
Query: 239 SYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPD 298
DHPSSMGVYGQESGGFSGPGENRSMSGPD
Sbjct: 214 -------------------------------DHPSSMGVYGQESGGFSGPGENRSMSGPD 242
Query: 299 NRGRGRGGFDRGGMSRGGRGGGRGGMGLQSE 329
NRGRGRGGFDRGGMSRGGRGGGRGGMG E
Sbjct: 243 NRGRGRGGFDRGGMSRGGRGGGRGGMGSAGE 273
Score = 42.7 bits (99), Expect = 5e-04
Identities = 24/43 (55%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 285 FSGPGENRSMSGPDNRGRGRGG-FDR---GGMSRGGRGGGRGG 323
F PG +R GP GRGG DR GGM RGGRGG RGG
Sbjct: 500 FPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGG 542
Score = 36.2 bits (82), Expect = 0.046
Identities = 22/47 (46%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 279 GQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG 325
G G G G GP RG G DRGG RGGRG RGG G
Sbjct: 510 GGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGF-RGGRGMDRGGFG 555
Score = 30.8 bits (68), Expect = 1.9
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 276 GVYGQESGGF-SGPGENRSMSGPDNRGRGRGGFDRGGMSR-GGRGGGRGGMG 325
G G + GGF G G +R G RG G GG M + GGR GGRGG G
Sbjct: 534 GGRGGDRGGFRGGRGMDRGGFGGGRRG-GPGGPPGPLMEQMGGRRGGRGGPG 584
Score = 30.4 bits (67), Expect = 2.5
Identities = 21/39 (53%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 287 GPGEN-RSMSGPDNRG-RGRGGFDRGGMSRGGRGGGRGG 323
GPG R G D G RG G DRGG GGR GG GG
Sbjct: 527 GPGGMFRGGRGGDRGGFRGGRGMDRGGFG-GGRRGGPGG 564
>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
[Homo sapiens]
Length = 526
Score = 146 bits (369), Expect = 2e-35
Identities = 119/322 (36%), Positives = 140/322 (43%), Gaps = 64/322 (19%)
Query: 1 MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQ-TTQAYGQQSYGTYGQPTDVSYTQAQTTA 59
MAS DY+ A Q Y AY QP QGY+Q ++Q YGQQSY Y Q TD T+
Sbjct: 1 MASNDYTQQ----ATQSYGAYPTQPGQGYSQQSSQPYGQQSYSGYSQSTD--------TS 48
Query: 60 TYGQTAYATSYGQPP-TGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAY 118
YGQ++Y+ SYGQ TGY T + PQ Y TG Y + S ++QS+Y
Sbjct: 49 GYGQSSYS-SYGQSQNTGYGTQSTPQGYGS------TGGYGS----------SQSSQSSY 91
Query: 119 GTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGS 178
G Q +YP YGQQPA P S++G Y S S+Y PQ GS
Sbjct: 92 GQQSSYPGYGQQPA------------------PSSTSGSYGSSSQS---SSYGQPQ-SGS 129
Query: 179 YPMQPVTAPPSYPPTSYSSTQPTSYDQ-SSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPP 237
Y QP SY S Q SY+ Y QQN Y S G G Q
Sbjct: 130 YSQQP-----SYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSM 184
Query: 238 TSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGP 297
+S G Y S YGQQ + S G GG G G NRS G
Sbjct: 185 SSGGGSGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGG-----GGGGGGGGYNRSSGGY 239
Query: 298 DNRGRGRGGFDRGGMSRGGRGG 319
+ RGRG G RGGM RGG
Sbjct: 240 EPRGRGGGRGGRGGMGGSDRGG 261
Score = 103 bits (257), Expect = 2e-22
Identities = 100/243 (41%), Positives = 121/243 (49%), Gaps = 57/243 (23%)
Query: 120 TQPAYPAYGQQPAATAPTRPQDGNKPTETSQP--QSSTGGYNQPS--LGYGQSNYS-YPQ 174
TQ A +YG P T+P G ++SQP Q S GY+Q + GYGQS+YS Y Q
Sbjct: 7 TQQATQSYGAYP-----TQPGQGYSQ-QSSQPYGQQSYSGYSQSTDTSGYGQSSYSSYGQ 60
Query: 175 VPGS-YPMQPVTAPPSYPPTS-YSSTQPTSYDQSSYSQQNTYG----QPSSYGQQSSYG- 227
+ Y Q + P Y T Y S+Q + QSSY QQ++Y QP+ SYG
Sbjct: 61 SQNTGYGTQ--STPQGYGSTGGYGSSQSS---QSSYGQQSSYPGYGQQPAPSSTSGSYGS 115
Query: 228 --QQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSF-------RQDHPSSM--- 275
Q SSYGQ PQ+GSYSQ PS Y Q SYGQQ S+ +Q+ +S
Sbjct: 116 SSQSSSYGQ-------PQSGSYSQQPS-YGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGG 167
Query: 276 -------GVYGQE-----SGGFSGPG-ENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRG 322
G YGQ+ SGG SG G N+ SG G G G DRGG RGG GGG G
Sbjct: 168 GGGGGGGGNYGQDQSSMSSGGGSGGGYGNQDQSGGGGSG-GYGQQDRGGRGRGGSGGGGG 226
Query: 323 GMG 325
G G
Sbjct: 227 GGG 229
Score = 40.4 bits (93), Expect = 0.002
Identities = 28/52 (53%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 276 GVYGQESGGFSGPGENRSMSGPDNRG-RGRGGFDRGGMSRGGRGGG-RGGMG 325
G G GG G G D G RGRGG DRGG RGGRGGG RGG G
Sbjct: 458 GPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGG-DRGGF-RGGRGGGDRGGFG 507
Score = 39.7 bits (91), Expect = 0.004
Identities = 25/45 (55%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 283 GGFSGPGENRSMSGPDNRGRGRGGFDRGGM-SRGG-RGGGRGGMG 325
GG G G D RG GRGG+DRGG RGG RGG RGG G
Sbjct: 456 GGGPGGSHMGGNYGDDRRG-GRGGYDRGGYRGRGGDRGGFRGGRG 499
>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
Length = 592
Score = 89.4 bits (220), Expect = 5e-18
Identities = 74/217 (34%), Positives = 91/217 (41%), Gaps = 32/217 (14%)
Query: 119 GTQPAYPAYGQ---QPAATAPTRPQDGNKPTETSQPQSSTG--GYNQPSLGYGQSNYSYP 173
G Q +Y YG Q A + T++S Q+ +G Y Q GY QS Y
Sbjct: 12 GEQQSYSTYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQSQSGYSQSYGGYE 71
Query: 174 -QVPGSYPMQPVTAPPSYPPTSYSSTQ---PTSYDQSSYSQQNTYGQPSSYGQ-QSSYGQ 228
Q SY QP S +Q SYDQ Y QQ++Y Q S Y Q Q SY +
Sbjct: 72 NQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQPDYGQQDSYDQQSGYDQHQGSYDE 131
Query: 229 QSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGP 288
QS+Y Q Q SYSQ Y Q +Y S QD + YG+
Sbjct: 132 QSNYDQ--------QHDSYSQNQQSYHSQRENY---SHHTQDDRRDVSRYGE-------- 172
Query: 289 GENRSMSGPDNRGRGRGGFDRGGMS--RGGRGGGRGG 323
+NR G GRGRGG+D+ G G GG RGG
Sbjct: 173 -DNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGDRGG 208
Score = 49.7 bits (117), Expect = 4e-06
Identities = 41/118 (34%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Query: 227 GQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYG-QQSSFRQDHPSSMGVYGQESGGF 285
G + YG Y G Y Y YG + + D S G YG + GG
Sbjct: 481 GDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDR--SRGGYGGDRGGG 538
Query: 286 SGPGENRSMS-GPDNRGRGRGGFDRGGMSRGGRGGGRGGMGLQSESLVYTSILKKYPY 342
SG G +RS G D G G GG DRGG G RGG G MG +++ Y + + PY
Sbjct: 539 SGYGGDRSGGYGGDRSGGGYGG-DRGGGYGGDRGGYGGKMGGRND---YRNDQRNRPY 592
Score = 42.0 bits (97), Expect = 8e-04
Identities = 36/113 (31%), Positives = 47/113 (41%), Gaps = 17/113 (15%)
Query: 209 SQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYS----QQSSSYGQQ 264
S +YGQ S G+Q SY S+YG P + Y QA YS SSYGQ
Sbjct: 2 SDSGSYGQ--SGGEQQSY---STYGN-------PGSQGYGQASQSYSGYGQTTDSSYGQN 49
Query: 265 SSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGR 317
S + S Y Q GG+ ++ P N + + G S+GGR
Sbjct: 50 YSGYSSYGQSQSGYSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSG-SQGGR 101
Score = 42.0 bits (97), Expect = 8e-04
Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 290 ENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG 325
E+ SG D RGRG GG +RG RGGRGG RGG G
Sbjct: 385 EDSRPSGGDFRGRGYGG-ERGYRGRGGRGGDRGGYG 419
Score = 39.7 bits (91), Expect = 0.004
Identities = 28/55 (50%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 270 DHPSSMGVYGQESGGFSGPGENRSMSG-PDNRGRGRGGFDRGGMSRGGRGGGRGG 323
D S G G SGG G G +RS G +RG G GG DRGG G RGGG GG
Sbjct: 430 DRSSGGGYSGDRSGG--GYGGDRSGGGYGGDRGGGYGG-DRGGGYGGDRGGGYGG 481
Score = 39.3 bits (90), Expect = 0.005
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 276 GVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMS--RGGRGGGRGGMG 325
G YG + GG G G +R G D RG G GG DRGG RGG GG RGG G
Sbjct: 469 GGYGGDRGG--GYGGDRGGYGGD-RGGGYGG-DRGGYGGDRGGYGGDRGGYG 516
Score = 36.6 bits (83), Expect = 0.035
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 15/98 (15%)
Query: 258 SSSYGQQSSFRQDH-----PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGM 312
S SYGQ +Q + P S G YGQ S +SG G+ S G+ G+ G
Sbjct: 4 SGSYGQSGGEQQSYSTYGNPGSQG-YGQASQSYSGYGQTTDSS----YGQNYSGYSSYGQ 58
Query: 313 SRGGRGGGRGGMGLQSESLVYTSILKKYPYSVLSRQHN 350
S+ G GG Q + S + PY+ +Q N
Sbjct: 59 SQSGYSQSYGGYENQKQ-----SSYSQQPYNNQGQQQN 91
Score = 36.6 bits (83), Expect = 0.035
Identities = 25/53 (47%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 274 SMGVYGQE---SGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGG 323
S G YG + GG+SG G D G G GG DRGG G RGGG GG
Sbjct: 423 SGGGYGGDRSSGGGYSGDRSGGGYGG-DRSGGGYGG-DRGGGYGGDRGGGYGG 473
Score = 36.2 bits (82), Expect = 0.046
Identities = 32/73 (43%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 254 YSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGM- 312
Y SS G S R S G G SGG G G +R +RG G GG DRGG
Sbjct: 427 YGGDRSSGGGYSGDR----SGGGYGGDRSGG--GYGGDRGGGYGGDRGGGYGG-DRGGGY 479
Query: 313 --SRGGRGGGRGG 323
RGG GG RGG
Sbjct: 480 GGDRGGYGGDRGG 492
Score = 36.2 bits (82), Expect = 0.046
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 274 SMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSR---GGRGGGRGGMG 325
S G YG + GG G G +R +RG G GG DRGG GG GG RGG G
Sbjct: 451 SGGGYGGDRGG--GYGGDRGGGYGGDRGGGYGG-DRGGYGGDRGGGYGGDRGGYG 502
Score = 35.8 bits (81), Expect = 0.060
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 251 PSQYSQQSSSYGQQSSFRQ--DHPSSMGVYGQESGGFSGPGENRSMSGP---DNRGRGRG 305
PS + YG + +R G YG + G G G +RS G D G G G
Sbjct: 389 PSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSG-GGYGGDRSSGGGYSGDRSGGGYG 447
Query: 306 GFDRGGMSRGGRGGGRGG 323
G GG G RGGG GG
Sbjct: 448 GDRSGGGYGGDRGGGYGG 465
Score = 32.0 bits (71), Expect = 0.86
Identities = 25/57 (43%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 278 YGQESG--GFSGPGENRSMSGPDNRGRGRGGFDR-------GGMSRGGRGGGRGGMG 325
YG E G G G G +R G D G G GG DR G S GG GG R G G
Sbjct: 399 YGGERGYRGRGGRGGDRGGYGGDRSGGGYGG-DRSSGGGYSGDRSGGGYGGDRSGGG 454
Score = 28.9 bits (63), Expect = 7.3
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 287 GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG 325
G G R G RG RGG+ G S GG GG R G
Sbjct: 398 GYGGERGYRGRGGRGGDRGGYG-GDRSGGGYGGDRSSGG 435
>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
Length = 589
Score = 85.5 bits (210), Expect = 7e-17
Identities = 75/222 (33%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 109 QASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQS 168
Q SY S YG P YGQ ++ G T S + GY+ Y QS
Sbjct: 14 QQSY---STYGN-PGSQGYGQA------SQSYSGYGQTTDSSYGQNYSGYSSYGQSYSQS 63
Query: 169 NYSYP-QVPGSYPMQPVTAPPSYPPTSYSSTQ---PTSYDQSSYSQQNTYGQPSSYGQ-Q 223
Y Q SY QP S +Q SYDQ Y QQ++Y Q S Y Q Q
Sbjct: 64 YGGYENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQPDYGQQDSYDQQSGYDQHQ 123
Query: 224 SSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESG 283
SY +QS+Y Q Q SYSQ Y Q +Y S QD + YG+
Sbjct: 124 GSYDEQSNYDQ--------QHDSYSQNQQSYHSQRENY---SHHTQDDRRDVSRYGE--- 169
Query: 284 GFSGPGENRSMSGPDNRGRGRGGFDRGGMS--RGGRGGGRGG 323
+NR G GRGRGG+D+ G G GG RGG
Sbjct: 170 ------DNRGYGGSQGGGRGRGGYDKDGRGPMTGSSGGDRGG 205
Score = 49.7 bits (117), Expect = 4e-06
Identities = 41/118 (34%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Query: 227 GQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYG-QQSSFRQDHPSSMGVYGQESGGF 285
G + YG Y G Y Y YG + + D S G YG + GG
Sbjct: 478 GDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDR--SRGGYGGDRGGG 535
Query: 286 SGPGENRSMS-GPDNRGRGRGGFDRGGMSRGGRGGGRGGMGLQSESLVYTSILKKYPY 342
SG G +RS G D G G GG DRGG G RGG G MG +++ Y + + PY
Sbjct: 536 SGYGGDRSGGYGGDRSGGGYGG-DRGGGYGGDRGGYGGKMGGRND---YRNDQRNRPY 589
Score = 42.0 bits (97), Expect = 8e-04
Identities = 22/36 (61%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 290 ENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG 325
E+ SG D RGRG GG +RG RGGRGG RGG G
Sbjct: 382 EDSRPSGGDFRGRGYGG-ERGYRGRGGRGGDRGGYG 416
Score = 39.7 bits (91), Expect = 0.004
Identities = 28/55 (50%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 270 DHPSSMGVYGQESGGFSGPGENRSMSG-PDNRGRGRGGFDRGGMSRGGRGGGRGG 323
D S G G SGG G G +RS G +RG G GG DRGG G RGGG GG
Sbjct: 427 DRSSGGGYSGDRSGG--GYGGDRSGGGYGGDRGGGYGG-DRGGGYGGDRGGGYGG 478
Score = 39.3 bits (90), Expect = 0.005
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 276 GVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMS--RGGRGGGRGGMG 325
G YG + GG G G +R G D RG G GG DRGG RGG GG RGG G
Sbjct: 466 GGYGGDRGG--GYGGDRGGYGGD-RGGGYGG-DRGGYGGDRGGYGGDRGGYG 513
Score = 36.6 bits (83), Expect = 0.035
Identities = 25/53 (47%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 274 SMGVYGQE---SGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGG 323
S G YG + GG+SG G D G G GG DRGG G RGGG GG
Sbjct: 420 SGGGYGGDRSSGGGYSGDRSGGGYGG-DRSGGGYGG-DRGGGYGGDRGGGYGG 470
Score = 36.2 bits (82), Expect = 0.046
Identities = 32/73 (43%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Query: 254 YSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGM- 312
Y SS G S R S G G SGG G G +R +RG G GG DRGG
Sbjct: 424 YGGDRSSGGGYSGDR----SGGGYGGDRSGG--GYGGDRGGGYGGDRGGGYGG-DRGGGY 476
Query: 313 --SRGGRGGGRGG 323
RGG GG RGG
Sbjct: 477 GGDRGGYGGDRGG 489
Score = 36.2 bits (82), Expect = 0.046
Identities = 26/55 (47%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
Query: 274 SMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSR---GGRGGGRGGMG 325
S G YG + GG G G +R +RG G GG DRGG GG GG RGG G
Sbjct: 448 SGGGYGGDRGG--GYGGDRGGGYGGDRGGGYGG-DRGGYGGDRGGGYGGDRGGYG 499
Score = 35.8 bits (81), Expect = 0.060
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 251 PSQYSQQSSSYGQQSSFRQ--DHPSSMGVYGQESGGFSGPGENRSMSGP---DNRGRGRG 305
PS + YG + +R G YG + G G G +RS G D G G G
Sbjct: 386 PSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDRSG-GGYGGDRSSGGGYSGDRSGGGYG 444
Query: 306 GFDRGGMSRGGRGGGRGG 323
G GG G RGGG GG
Sbjct: 445 GDRSGGGYGGDRGGGYGG 462
Score = 32.0 bits (71), Expect = 0.86
Identities = 25/57 (43%), Positives = 26/57 (45%), Gaps = 10/57 (17%)
Query: 278 YGQESG--GFSGPGENRSMSGPDNRGRGRGGFDR-------GGMSRGGRGGGRGGMG 325
YG E G G G G +R G D G G GG DR G S GG GG R G G
Sbjct: 396 YGGERGYRGRGGRGGDRGGYGGDRSGGGYGG-DRSSGGGYSGDRSGGGYGGDRSGGG 451
Score = 28.9 bits (63), Expect = 7.3
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 287 GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMG 325
G G R G RG RGG+ G S GG GG R G
Sbjct: 395 GYGGERGYRGRGGRGGDRGGYG-GDRSGGGYGGDRSSGG 432
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 79.0 bits (193), Expect = 6e-15
Identities = 86/275 (31%), Positives = 116/275 (42%), Gaps = 26/275 (9%)
Query: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
S YS S A + YT Q + Y+ T+ +Y S PT +Y+ T+ +Y
Sbjct: 1590 SPSYSPTSPAYEPRSPGGYTPQ-SPSYSPTSPSYSPTSPSY--SPTSPNYSP--TSPSYS 1644
Query: 63 QTAYATSYGQPPTGYTTPTAPQAYSQPVQGYG--TGAYDTTTATVTTTQASYAAQSAYGT 120
T+ SY Y+ PT+P +YS Y + +Y T+ + + T SY+ S
Sbjct: 1645 PTS--PSYSPTSPSYS-PTSP-SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SY 1699
Query: 121 QPAYPAYGQQPAATAPTRPQDGNKPTETS-QPQSSTGGYNQPSLGYGQSNYSYPQVPGSY 179
P P+Y + +PT P PT S P S + PS NYS P P
Sbjct: 1700 SPTSPSYSPTSPSYSPTSPS--YSPTSPSYSPTSPSYSPTSPSYSPTSPNYS-PTSPNYT 1756
Query: 180 PMQPVTAP--PSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSS-YGQQP 236
P P +P PSY PTS + T PTS + S S + PS SY S Y Q
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYT-PTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQS 1815
Query: 237 PT------SYPPQTGSYSQAPSQYSQQSSSYGQQS 265
PT SY P + SYS +Y+ S SY S
Sbjct: 1816 PTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSS 1850
Score = 67.0 bits (162), Expect = 2e-11
Identities = 89/322 (27%), Positives = 127/322 (39%), Gaps = 43/322 (13%)
Query: 8 TYSQAAAQQGYSAYTAQPTQ-GYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAY 66
+YS + ++ + PT Y+ T+ +Y S PT SY+ T+ +Y T+
Sbjct: 1649 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPSYSP--TSPSYSPTS- 1703
Query: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYG--TGAYDTTTATVTTTQASYAAQSAYGTQPAY 124
SY Y+ PT+P +YS Y + +Y T+ + + T +Y+ S T P
Sbjct: 1704 -PSYSPTSPSYS-PTSP-SYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYT-PTS 1759
Query: 125 PAYGQQPAATAPTRPQ-----DGNKPTETSQPQSSTGGYNQPSLGYGQSNYSY-PQVPGS 178
P+Y + +PT P PT S +S Y+ S Y S+ Y PQ P
Sbjct: 1760 PSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPS-YSPTSPSYSPSSPRYTPQSPTY 1818
Query: 179 YPMQPVTAP--PSYPPTS--YSSTQPTSYDQSS---------YSQQNTYGQPSS--YGQQ 223
P P +P PSY PTS Y+ T P SY SS YS + P+S Y
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSP-SYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPT 1877
Query: 224 SSYGQQSSYGQQP------PTS--YPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSM 275
S ++ P PTS Y P + YS YS S Y S
Sbjct: 1878 SPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKG 1937
Query: 276 GVYGQESGGFSGPGENRSMSGP 297
Y S G+S S++ P
Sbjct: 1938 STYSPTSPGYSPTSPTYSLTSP 1959
Score = 66.6 bits (161), Expect = 3e-11
Identities = 80/275 (29%), Positives = 110/275 (40%), Gaps = 26/275 (9%)
Query: 33 TQAYG--QQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPV 90
T AYG S G+ P ++ + + G S G P TP +P + P
Sbjct: 1525 TPAYGAWSPSVGSGMTPGAAGFSPSAASDASG-----FSPGYSPAWSPTPGSPGSPG-PS 1578
Query: 91 QGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQ 150
Y + + + T +Y +S G P P+Y + +PT P PT +
Sbjct: 1579 SPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPS--YSPTSPNY 1636
Query: 151 PQSSTGGYNQPSLGYGQSNYSY-PQVPGSYPMQPVTAP--PSYPPT--SYSSTQPTSYDQ 205
+S Y+ S Y ++ SY P P P P +P PSY PT SYS T P SY
Sbjct: 1637 SPTSPS-YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP-SYSP 1694
Query: 206 SSYSQQNTYGQPSSYGQQSSYGQQS-SYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQ 264
+S S T PS SY S SY P SY P + SYS YS S +Y
Sbjct: 1695 TSPSYSPT--SPSYSPTSPSYSPTSPSYSPTSP-SYSPTSPSYSPTSPSYSPTSPNYSPT 1751
Query: 265 S-SFRQDHPSSMGVYGQESGGFSGPGENRSMSGPD 298
S ++ PS Y S +S N + + P+
Sbjct: 1752 SPNYTPTSPS----YSPTSPSYSPTSPNYTPTSPN 1782
>gi|5454064 RNA binding motif protein 14 [Homo sapiens]
Length = 669
Score = 74.3 bits (181), Expect = 2e-13
Identities = 88/312 (28%), Positives = 126/312 (40%), Gaps = 69/312 (22%)
Query: 19 SAYTAQPT---------QGYAQTTQAYGQQSYGTYG--QPTDVSYTQ-------AQTTAT 60
++Y AQP+ Q + ++Q+ S G YG QP+ + + A + +
Sbjct: 271 ASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNS 330
Query: 61 YG-QTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG 119
YG Q + SYG P+ Y +Q YG A A+ TQ + ++ +YG
Sbjct: 331 YGAQGSSLASYGNQPSSYG--------AQAASSYGVRA----AASSYNTQGAASSLGSYG 378
Query: 120 TQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYG-QSNYSYPQVPGS 178
Q A +YG Q AA++ + +QP +S YN S Y Q SY P +
Sbjct: 379 AQAA--SYGAQSAASSLA--YGAQAASYNAQPSAS---YNAQSAPYAAQQAASYSSQPAA 431
Query: 179 YPMQPVTA------PPSY------PPTSYSSTQPTSYDQ-SSYSQQNTYGQPSSYGQQS- 224
Y QP TA P +Y P QP Q +SY Q + G SYG QS
Sbjct: 432 YVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSA 491
Query: 225 -----SYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVY- 278
SYG ++YG QP + + Y QSS+ S Q HP + Y
Sbjct: 492 AAATGSYGAAAAYGAQPSAT----------LAAPYRTQSSASLAASYAAQQHPQAAASYR 541
Query: 279 GQESGGFSGPGE 290
GQ + G G+
Sbjct: 542 GQPGNAYDGAGQ 553
Score = 69.7 bits (169), Expect = 4e-12
Identities = 84/306 (27%), Positives = 117/306 (38%), Gaps = 40/306 (13%)
Query: 2 ASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYT------QA 55
A++ Y+T A++ Y A A A ++ AYG Q+ QP+ SY A
Sbjct: 361 AASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPS-ASYNAQSAPYAA 419
Query: 56 QTTATY--------GQTAYATSYGQPPTGY----TTPTAPQAYSQPVQGYGTGAYDTTTA 103
Q A+Y Q A A +Y P Y TTP A +QPV +Y +
Sbjct: 420 QQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQAS 479
Query: 104 TVTTTQASYAAQS---AYGTQPAYPAYGQQPAAT--APTRPQDGNKPTET----SQPQSS 154
SY AQS A G+ A AYG QP+AT AP R Q + PQ++
Sbjct: 480 --MGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAA 537
Query: 155 TGGYNQPSLGY---GQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYD---QSSY 208
QP Y GQ + +Y + + PP Y T S + SYD + +
Sbjct: 538 ASYRGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPR-ASYDDPYKKAV 596
Query: 209 SQQNTYGQPSSYGQQSSYGQQSSYG---QQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQS 265
+ YG + S Y + S ++ PT A S Y++ S SY
Sbjct: 597 AMSKRYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYL 656
Query: 266 SFRQDH 271
Q H
Sbjct: 657 RAAQMH 662
Score = 35.4 bits (80), Expect = 0.078
Identities = 51/222 (22%), Positives = 74/222 (33%), Gaps = 35/222 (15%)
Query: 153 SSTGGYNQPSLGYGQSNYSYPQVPG--------SYPMQPVTAPPSYPPTSYSSTQPTSYD 204
+STGG++ GQ+ P G S P AP + P +Y + QP+
Sbjct: 193 NSTGGFD------GQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRA-QPSVSL 245
Query: 205 QSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY-PPQTGSYSQAPSQYSQQS----- 258
++Y Q + Y Q Q +SY QP S P G + SQ + S
Sbjct: 246 GAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPY 305
Query: 259 ----------SSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFD 308
SSYG Q++ SS+ YG + + G S G
Sbjct: 306 GGAQPSASALSSYGGQAA----AASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAA 361
Query: 309 RGGMSRGGRGGGRGGMGLQSESLVYTSILKKYPYSVLSRQHN 350
+ G G G Q+ S S Y + +N
Sbjct: 362 ASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYN 403
>gi|62122917 filaggrin family member 2 [Homo sapiens]
Length = 2391
Score = 72.4 bits (176), Expect = 6e-13
Identities = 93/348 (26%), Positives = 136/348 (39%), Gaps = 41/348 (11%)
Query: 3 STDYSTYSQAAAQQ-GYSAYTAQPTQ--GYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTA 59
ST + Y + Q G+ + + Q G+ Q G SYG +G + S Q +
Sbjct: 652 STGFGQYGSGSGQSSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGS 711
Query: 60 TYGQTA----------YATSYGQPPTGYTTPTA-PQAYSQPVQGYGTGAYDTTTATVTTT 108
+ GQT+ ++S+GQ +G + Q S Q G G +++ +
Sbjct: 712 SSGQTSGFGQHELSSGQSSSFGQHGSGSGQSSGFGQHGSGSGQSSGFGQHESRSG----- 766
Query: 109 QASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQS 168
Q+SY S+ +Q + YGQ + Q G+ ++++ G Q S G+GQ
Sbjct: 767 QSSYGQHSSGSSQSS--GYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQ-SAGFGQH 823
Query: 169 NYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYG---------QPSS 219
Q G + + SY S+Q + Y Q S T G Q S
Sbjct: 824 GSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTSGFGQHRSSSGQYSG 883
Query: 220 YGQQ-SSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVY 278
+GQ S GQ S +GQ S Q + Q S+ Q SSYGQ S S G +
Sbjct: 884 FGQHGSGSGQSSGFGQHGTGS--GQYSGFGQHESRSHQ--SSYGQHGS-GSSQSSGYGQH 938
Query: 279 GQESGGFSGPGENRSMSGPDN----RGRGRGGFDRGGMSRGGRGGGRG 322
G SG G G++RS SG + G G G G G G G
Sbjct: 939 GSSSGQTFGFGQHRSGSGQSSGFGQHGSGSGQSSGFGQHESGSGKSSG 986
Score = 71.6 bits (174), Expect = 1e-12
Identities = 88/337 (26%), Positives = 134/337 (39%), Gaps = 40/337 (11%)
Query: 4 TDYSTYSQAAAQQ-GYSAY--TAQPTQGYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTTA 59
+ Y + ++Q GY + ++ T G+ Q + GQ S +G +G + S Q
Sbjct: 843 SSYGQHGSGSSQSSGYGQHGSSSGQTSGFGQHRSSSGQYSGFGQHGSGSGQSSGFGQHGT 902
Query: 60 TYGQ---------TAYATSYGQPPTGYTTPTA-PQAYSQPVQGYGTGAYDTTTATVTTTQ 109
GQ ++ +SYGQ +G + + Q S Q +G G + + + Q
Sbjct: 903 GSGQYSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFGFGQHRSGSG-----Q 957
Query: 110 ASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSN 169
+S Q G+ + +GQ + + + ++ + G + S GYGQ
Sbjct: 958 SSGFGQHGSGSGQS-SGFGQHESGSGKSSGFGQHESRSSQSNYGQHGSGSSQSSGYGQHG 1016
Query: 170 YSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNT-YGQPSSYGQQSSYGQ 228
S Q G + + S + S S + Q T GQ S +GQ S +
Sbjct: 1017 SSSGQTTGFGQHRSSSGQYS----GFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSR 1072
Query: 229 QSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHP-----SSMGVYGQESG 283
QSSYGQ GS S S Y Q S+ GQ S F Q P S G YG SG
Sbjct: 1073 QSSYGQH---------GSGSSQSSGYGQHGSNSGQTSGFGQHRPGSGQSSGFGQYGSGSG 1123
Query: 284 GFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGG 320
SG G++ S +G + G + + G S G G G
Sbjct: 1124 QSSGFGQHGSGTGKSS-GFAQHEYRSGQSSYGQHGTG 1159
Score = 69.7 bits (169), Expect = 4e-12
Identities = 95/363 (26%), Positives = 145/363 (39%), Gaps = 62/363 (17%)
Query: 4 TDYSTYSQAAAQQ-GYSAYTAQPTQGYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTTATY 61
+ Y + ++Q GY Y ++ T G+ Q GQ + +G YG + S Q +
Sbjct: 541 SSYGQHGSGSSQSSGYGQYGSRETSGFGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGS 600
Query: 62 GQTAY---------ATSYGQPPTGYTTPTA-PQAYSQPVQGYGTGAYDTTTATVTTTQAS 111
GQ++ +SYGQ +G + + Q S+ G+G ++ +T S
Sbjct: 601 GQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGS 660
Query: 112 YAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGY---NQPSLGYGQS 168
+ QS+ +GQ + + + G E+ SS G + + S GYGQ
Sbjct: 661 GSGQSS--------GFGQHVSGSGQS---SGFGQHESRSGHSSYGQHGFGSSQSSGYGQH 709
Query: 169 NYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQ--SSYSQQNTYGQPSS-YGQQSS 225
S Q G + SS Q +S+ Q S Q + +GQ S GQ S
Sbjct: 710 GSSSGQTSG------------FGQHELSSGQSSSFGQHGSGSGQSSGFGQHGSGSGQSSG 757
Query: 226 YGQ------QSSYGQQPPTSYPPQTGSYSQAPSQY----------SQQSSSYGQQSSFRQ 269
+GQ QSSYGQ +S Q+ Y Q S+ S QS+ +GQ S
Sbjct: 758 FGQHESRSGQSSYGQH--SSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGS-GS 814
Query: 270 DHPSSMGVYGQESGGFSGPGENRSMSGPDNRGR-GRGGFDRGGMSRGGRGGGR-GGMGLQ 327
+ G +G SG SG G++ S S + G+ G G G + G G+ G G
Sbjct: 815 GQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTSGFGQH 874
Query: 328 SES 330
S
Sbjct: 875 RSS 877
Score = 64.7 bits (156), Expect = 1e-10
Identities = 90/353 (25%), Positives = 135/353 (38%), Gaps = 42/353 (11%)
Query: 3 STDYSTYSQAAAQQ---GYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTA 59
ST + Y + Q G + + G+ Q Q SYG +G + S Q +
Sbjct: 804 STGFGQYGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGS 863
Query: 60 TYGQTA----YATSYGQ-PPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAA 114
+ GQT+ + +S GQ G + Q+ G G+G Y + + S
Sbjct: 864 SSGQTSGFGQHRSSSGQYSGFGQHGSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSYG 923
Query: 115 QSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSST----GGYNQPSLGYGQSNY 170
Q G+ + YGQ +++ T G + QSS G + S G+GQ
Sbjct: 924 QHGSGSSQS-SGYGQHGSSSGQTF---GFGQHRSGSGQSSGFGQHGSGSGQSSGFGQHES 979
Query: 171 SYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQ-QSSYGQQ 229
+ G + ++ +Y S+Q + Y Q S GQ + +GQ +SS GQ
Sbjct: 980 GSGKSSGFGQHESRSSQSNYGQHGSGSSQSSGYGQHGSSS----GQTTGFGQHRSSSGQY 1035
Query: 230 SSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQ----DHPSSMGVYGQ---ES 282
S +GQ GS S S + Q + GQ S F Q SS G +G +S
Sbjct: 1036 SGFGQH---------GSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHGSGSSQS 1086
Query: 283 GGFSGPGENRSMS---GPDNRGRGR-GGFDRGGMSRGGRGG-GRGGMGLQSES 330
G+ G N + G G G+ GF + G G G G+ G G S
Sbjct: 1087 SGYGQHGSNSGQTSGFGQHRPGSGQSSGFGQYGSGSGQSSGFGQHGSGTGKSS 1139
Score = 54.3 bits (129), Expect = 2e-07
Identities = 85/349 (24%), Positives = 132/349 (37%), Gaps = 64/349 (18%)
Query: 16 QGYSAYTAQPTQGYAQT-----TQAYGQQSYGTY--GQPTD------VSYTQAQTTATYG 62
QG+ + G Q +Q+Y Q+ YG GQP + +Q+ YG
Sbjct: 325 QGHGCVSGGQPSGCGQPESNPCSQSYSQRGYGARENGQPQNCGGQWRTGSSQSSCCGQYG 384
Query: 63 QT-AYATSYGQPPTG----YTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSA 117
+ + S GQ G ++ ++ +S+ Q YG+G+ +T+ T S ++
Sbjct: 385 SGGSQSCSNGQHEYGSCGRFSNSSSSNEFSKCDQ-YGSGSSQSTSFEQHGTGLSQSSGFE 443
Query: 118 YGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPG 177
+ GQ + ++ + D + T G+ Q G GQS+
Sbjct: 444 QHVCGSGQTCGQHESTSSQSLGYD-----QHGSSSGKTSGFGQHGSGSGQSS-------- 490
Query: 178 SYPMQPVTAPPSYPPTSYSSTQPTSYDQ--SSYSQQNTYGQPSSY-GQQSSYGQ------ 228
+ S Q + + Q S Q + +GQ S GQ S +GQ
Sbjct: 491 -----------GFGQCGSGSGQSSGFGQHGSVSGQSSGFGQHGSVSGQSSGFGQHESRSR 539
Query: 229 QSSYGQQ-PPTSYPPQTGSY-SQAPSQYSQQSSSYGQQSSFRQ-----DHPSSMGVYGQE 281
QSSYGQ +S G Y S+ S + Q GQ + F Q S G +G
Sbjct: 540 QSSYGQHGSGSSQSSGYGQYGSRETSGFGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSG 599
Query: 282 SGGFSGPGENRSMSGPDNRGRGRGGFDRGG-----MSRGGRGGGRGGMG 325
SG SG G++ S SG + G+ G + SR G G+ G G
Sbjct: 600 SGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSG 648
Score = 50.8 bits (120), Expect = 2e-06
Identities = 86/341 (25%), Positives = 127/341 (37%), Gaps = 59/341 (17%)
Query: 37 GQQSYGTYGQPTDVSYTQAQTTAT-YGQ-TAYATSYGQPPTGYTTPTAPQAYSQPVQGYG 94
GQ YG+ G+ ++ S + + YG ++ +TS+ Q TG + + + Q V G G
Sbjct: 394 GQHEYGSCGRFSNSSSSNEFSKCDQYGSGSSQSTSFEQHGTGLSQSSG---FEQHVCGSG 450
Query: 95 TGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSS 154
T +T+ S + +GQ + + + G + QSS
Sbjct: 451 ----QTCGQHESTSSQSLGYDQHGSSSGKTSGFGQHGSGSGQS---SGFGQCGSGSGQSS 503
Query: 155 T----GGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQ 210
G + S G+GQ Q G + + SY S+Q + Y Q +
Sbjct: 504 GFGQHGSVSGQSSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGSGSSQSSGYGQYGSRE 563
Query: 211 QNTYGQP---------------------------SSYGQQSSYGQ------QSSYGQQPP 237
+ +GQ S GQ S +GQ QSSYGQ
Sbjct: 564 TSGFGQHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQH-- 621
Query: 238 TSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGP 297
+S Q+ Y Q S+Q+S +GQ S + G YG SG SG G++ S SG
Sbjct: 622 SSGSSQSSGYGQ---HGSRQTSGFGQHGS-GSSQSTGFGQYGSGSGQSSGFGQHVSGSG- 676
Query: 298 DNRGRGRGGFDRGGMSRGGRGGG---RGGMGLQSESLVYTS 335
+ G G+ G S G G G G G S TS
Sbjct: 677 QSSGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGSSSGQTS 717
Score = 49.3 bits (116), Expect = 5e-06
Identities = 73/288 (25%), Positives = 112/288 (38%), Gaps = 47/288 (16%)
Query: 26 TQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTA----YATSYGQPPTGYTTPT 81
+ G+ Q Q +YG +G + S Q ++ GQT + +S GQ +G+
Sbjct: 984 SSGFGQHESRSSQSNYGQHGSGSSQSSGYGQHGSSSGQTTGFGQHRSSSGQY-SGFGQHG 1042
Query: 82 APQAYSQPVQGYGTGAYDTT---TATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTR 138
+ S +GTG+ ++ + Q+SY + +Q + YGQ + + T
Sbjct: 1043 SGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHGSGSSQSS--GYGQHGSNSGQTS 1100
Query: 139 PQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSST 198
++P QSS G+ Q G GQS+ + +
Sbjct: 1101 GFGQHRP---GSGQSS--GFGQYGSGSGQSS-------------------GFGQHGSGTG 1136
Query: 199 QPTSYDQSSY-SQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQ 257
+ + + Q Y S Q++YGQ + QSS Q G P TS+ Q S S S Q
Sbjct: 1137 KSSGFAQHEYRSGQSSYGQHGTGSSQSSGCGQHESGSGPTTSF-GQHVSGSDNFSSSGQH 1195
Query: 258 SSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSM---SGPDNRGR 302
S GQ + F G YG SG +G G+ S SG GR
Sbjct: 1196 ISDSGQSTGF--------GQYGSGSGQSTGLGQGESQQVESGSTVHGR 1235
Score = 43.5 bits (101), Expect = 3e-04
Identities = 60/278 (21%), Positives = 114/278 (41%), Gaps = 27/278 (9%)
Query: 8 TYSQAAAQQGYSAYTAQPTQG--YAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTA 65
T+SQA +Q G S T Y QT +A G G +GQ T ++TT G
Sbjct: 1369 THSQAGSQHGESESTVHERHETTYGQTGEATGHGHSG-HGQSTQRG---SRTTGRRGSGH 1424
Query: 66 YATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYP 125
+S + +G + PQ+ Q G + + +TV + Q+ T+ A+
Sbjct: 1425 SESSDSEVHSGGSH--RPQSQEQ-THGQAGSQHGESGSTVHGRHGTTHGQTGDTTRHAHY 1481
Query: 126 AYGQQPAATAPTRPQDGNKPTETSQPQSSTGG-YNQPSLGYGQSNYSYPQVPGS-YPMQP 183
+G+ + T + G+ +E+S + +GG + +GQS + + +
Sbjct: 1482 HHGKSTQRGSSTTGRRGSGHSESSDSEVHSGGSHTHSGHTHGQSGSQHGESESIIHDRHR 1541
Query: 184 VTAPPSYPPTSYSST---------------QPTSYDQSSYSQQNTYGQPSSYGQQSSYGQ 228
+T + T +S + Q TS+ +S+ S+ ++ G + ++ +YGQ
Sbjct: 1542 ITHGQTGDTTRHSYSGHEQTTQTGSRTTGRQRTSHSESTDSEVHSGGSHRPHSREHTYGQ 1601
Query: 229 QSSYGQQPPTSYPPQTG-SYSQAPSQYSQQSSSYGQQS 265
S ++P + + G ++ Q S +GQ +
Sbjct: 1602 AGSQHEEPEFTVHERHGTTHGQIGDTTGHSHSGHGQST 1639
Score = 41.6 bits (96), Expect = 0.001
Identities = 57/294 (19%), Positives = 109/294 (37%), Gaps = 47/294 (15%)
Query: 39 QSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPT----------------- 81
Q+ +G+ + + QTT +GQT T +G P G T T
Sbjct: 1903 QARSQHGESESTVHKRHQTT--HGQTGDTTEHGHPSHGQTIQTGSRTTGRRGSGHSEYSD 1960
Query: 82 --APQAYSQPVQGYGTGA----YDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATA 135
P S G+ G Y + ++V + Q+A T+ + +GQ +
Sbjct: 1961 SEGPSGVSHTHSGHTHGQAGSHYPESGSSVHERHGTTHGQTADTTRHGHSGHGQSTQRGS 2020
Query: 136 PTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSY 195
T + + +E S + +G + + S +++ Q + + + T
Sbjct: 2021 RTTGRRASGHSEYSDSEGHSG------VSHTHSGHAHGQAGSQHGESGSSVHERHGTTHG 2074
Query: 196 SSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYS 255
+ T + S + Q G ++ + S + + S S+ +Y QA SQ+
Sbjct: 2075 QTGDTTRHAHSGHGQSTQRGSRTAGRRGSGHSESSDSEVHSGVSHTHSGHTYGQARSQHG 2134
Query: 256 QQSSS-YGQQSSFRQDHPSSMGVYGQESG----GFSGPGENRSMSGPDNRGRGR 304
+ S+ +G+Q + ++GQ G SG G++ + +G GR R
Sbjct: 2135 ESGSAIHGRQGT----------IHGQTGDTTRHGQSGHGQS-TQTGSRTTGRQR 2177
Score = 41.2 bits (95), Expect = 0.001
Identities = 57/270 (21%), Positives = 99/270 (36%), Gaps = 45/270 (16%)
Query: 29 YAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQ 88
Y Q +G+ +G+ + +GQT T +GQ G +T T + +
Sbjct: 2126 YGQARSQHGESGSAIHGRQGTI----------HGQTGDTTRHGQSGHGQSTQTGSRTTGR 2175
Query: 89 PVQGYGTGAYDTTTATVTTTQASYA---AQSAYG--------------------TQPAYP 125
+ + + + T + + A S +G T+ A+
Sbjct: 2176 QRSSHSESSDSEVHSEASPTHSGHTHSQAGSRHGQSGSSGHGRQGTTHGQTGDTTRHAHY 2235
Query: 126 AYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVT 185
YGQ + T + G+ +E+S + + G + S G+ Q GS QP +
Sbjct: 2236 GYGQSTQRGSRTTGRRGSGHSESSDSEVHSWGSHTHS-GHIQGQ------AGSQQRQPGS 2288
Query: 186 APPSYPPTSYSST-QPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQT 244
T++ T T + S Y Q G SS + S + SS Q+ +S +
Sbjct: 2289 TVHGRLETTHGQTGDTTRHGHSGYGQSTQTGSRSS--RASHFQSHSSERQRHGSSQVWKH 2346
Query: 245 GSYSQAPSQYSQQSSSYGQQSSFRQDHPSS 274
GSY P++Y + YG R+ +S
Sbjct: 2347 GSY--GPAEYDYGHTGYGPSGGSRKSISNS 2374
Score = 39.3 bits (90), Expect = 0.005
Identities = 67/324 (20%), Positives = 122/324 (37%), Gaps = 29/324 (8%)
Query: 8 TYSQAAAQQGYSAYTAQPTQG--YAQTTQAYGQQSYGTYGQPTDV-SYTQAQTTATYGQT 64
TY QA +Q +T G + Q G S+ +GQ T S T + +++ ++
Sbjct: 1598 TYGQAGSQHEEPEFTVHERHGTTHGQIGDTTGH-SHSGHGQSTQRGSRTTGRQRSSHSES 1656
Query: 65 AYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAY 124
+ + + +T T QA SQ Q + + V + Q+ T+ A+
Sbjct: 1657 SDSEVHSGVSHTHTGHTHGQAGSQHGQ---------SESIVPERHGTTHGQTGDTTRHAH 1707
Query: 125 PAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPV 184
+G + T + G+ +E S + +G + + S +++ Q +
Sbjct: 1708 YHHGLTTQTGSRTTGRRGSGHSEYSDSEGYSG------VSHTHSGHTHGQARSQHGESES 1761
Query: 185 TAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQS-SYGQQPPTSYPPQ 243
+ + T + S + Q G ++ + S + + S S G + P
Sbjct: 1762 IVHERHGTIHGQTGDTTRHAHSGHGQSTQTGSRTTGRRSSGHSEYSDSEGHSGFSQRPHS 1821
Query: 244 TG-SYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESG-GFSGPGENRSMSGPDNRG 301
G ++ QA SQ+ + S ++ H ++ G G SG SG G++ + SG G
Sbjct: 1822 RGHTHGQAGSQHGESESIVDER------HGTTHGQTGDTSGHSQSGHGQS-TQSGSSTTG 1874
Query: 302 RGRGGFDRGGMSRGGRGGGRGGMG 325
R R G S GG G
Sbjct: 1875 RRRSGHSESSDSEVHSGGSHTHSG 1898
Score = 38.9 bits (89), Expect = 0.007
Identities = 62/318 (19%), Positives = 112/318 (35%), Gaps = 31/318 (9%)
Query: 8 TYSQAAAQQGYSAYTAQP----TQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQ 63
T+ QA +Q G S T G T + +G Q T ++TT G
Sbjct: 1673 THGQAGSQHGQSESIVPERHGTTHGQTGDTTRHAHYHHGLTTQ------TGSRTTGRRGS 1726
Query: 64 --TAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQ 121
+ Y+ S G +T +S G + + + V + Q+ T+
Sbjct: 1727 GHSEYSDSEGYSGVSHT-------HSGHTHGQARSQHGESESIVHERHGTIHGQTGDTTR 1779
Query: 122 PAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPM 181
A+ +GQ + T + + +E S + +G +P +++ Q GS
Sbjct: 1780 HAHSGHGQSTQTGSRTTGRRSSGHSEYSDSEGHSGFSQRPH----SRGHTHGQA-GSQHG 1834
Query: 182 QPVTAPPSYPPTSYSSTQPTS-YDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSY 240
+ + T++ T TS + QS + Q G ++ ++S + + S S+
Sbjct: 1835 ESESIVDERHGTTHGQTGDTSGHSQSGHGQSTQSGSSTTGRRRSGHSESSDSEVHSGGSH 1894
Query: 241 PPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNR 300
++SQA SQ+ + S+ ++ +G S G +G
Sbjct: 1895 THSGHTHSQARSQHGESESTVHKRHQTTHGQTGDTTEHGHPSHG------QTIQTGSRTT 1948
Query: 301 GRGRGGFDRGGMSRGGRG 318
GR G S G G
Sbjct: 1949 GRRGSGHSEYSDSEGPSG 1966
Score = 35.4 bits (80), Expect = 0.078
Identities = 58/311 (18%), Positives = 108/311 (34%), Gaps = 31/311 (9%)
Query: 40 SYGTYGQPTDVSYT-QAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYS---------QP 89
++G G T SY+ QTT T +T G+ T ++ T + +S +
Sbjct: 1543 THGQTGDTTRHSYSGHEQTTQTGSRTT-----GRQRTSHSESTDSEVHSGGSHRPHSREH 1597
Query: 90 VQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETS 149
G ++ TV + Q T ++ +GQ + T + + +E+S
Sbjct: 1598 TYGQAGSQHEEPEFTVHERHGTTHGQIGDTTGHSHSGHGQSTQRGSRTTGRQRSSHSESS 1657
Query: 150 QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS 209
+ +G + + + +++ Q + P + T + T + +
Sbjct: 1658 DSEVHSG------VSHTHTGHTHGQAGSQHGQSESIVPERHGTTHGQTGDTTRHAHYHHG 1711
Query: 210 QQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSS--------Y 261
G ++ + S + + S S+ ++ QA SQ+ + S +
Sbjct: 1712 LTTQTGSRTTGRRGSGHSEYSDSEGYSGVSHTHSGHTHGQARSQHGESESIVHERHGTIH 1771
Query: 262 GQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGR 321
GQ + S G Q G G S + G GF + SRG G
Sbjct: 1772 GQTGDTTRHAHSGHGQSTQT--GSRTTGRRSSGHSEYSDSEGHSGFSQRPHSRGHTHGQA 1829
Query: 322 GGMGLQSESLV 332
G +SES+V
Sbjct: 1830 GSQHGESESIV 1840
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 69.3 bits (168), Expect = 5e-12
Identities = 81/267 (30%), Positives = 98/267 (36%), Gaps = 43/267 (16%)
Query: 70 YGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQ 129
+G P Y + T PQ Y +QG A + T S YG Q P Y Q
Sbjct: 415 HGYPGQPYGSQT-PQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQ 473
Query: 130 Q---------PAATAPTRPQDGNKPTETSQPQSSTGGY--NQPSLGYGQSNYSYPQVPGS 178
Q P + P +P+ QPQS +QP S + Q P
Sbjct: 474 QSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAP 533
Query: 179 YPMQPVTA---PPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSY-------GQ 228
YP Q T P S PP YS Q S Q QQ PS+ QQ++Y Q
Sbjct: 534 YPSQQSTTQQHPQSQPP--YSQPQAQSPYQQQQPQQPA---PSTLSQQAAYPQPQSQQSQ 588
Query: 229 QSSYGQQ--PPTSYPPQTGSYSQAPSQYSQQSSSYGQQ--SSFRQDHPSS---------- 274
Q++Y QQ PP Q SQA S S SS GQ+ + Q PSS
Sbjct: 589 QTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDD 648
Query: 275 --MGVYGQESGGFSGPGENRSMSGPDN 299
MG G S G S G + S N
Sbjct: 649 LPMGTEGALSPGVSTSGISSSQGEQSN 675
Score = 49.3 bits (116), Expect = 5e-06
Identities = 66/262 (25%), Positives = 95/262 (36%), Gaps = 35/262 (13%)
Query: 6 YSTYSQAAAQQGY---SAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
+ +Y + QG S + +Q T Y Q Q Y + GTYG P +
Sbjct: 1336 HDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGPPA------KRHEGEMY 1389
Query: 63 QTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDT----TTATVTTTQASYAAQSAY 118
Y+T GQP P PQ SQ + D A T A+ + A
Sbjct: 1390 SVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATATAATERRPAG 1449
Query: 119 GTQPAYPAYGQQPAATAP--TRPQDGNKPTETSQP-QSSTGGYNQPSLGYGQS----NYS 171
G Q +P + +AP T Q P P Q+S Q ++ G++ NY+
Sbjct: 1450 GPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQGRNDMTYNYA 1509
Query: 172 YPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYG-QQSSYGQQS 230
Q GS P P +Y T + + N G S+G +Q YG +
Sbjct: 1510 NRQSTGSAPQGP----------AYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPYGPSA 1559
Query: 231 SYGQQPPTSYPPQTGSYSQAPS 252
PP + PP + +Y PS
Sbjct: 1560 PV---PPMTRPPPS-NYQPPPS 1577
Score = 42.7 bits (99), Expect = 5e-04
Identities = 69/271 (25%), Positives = 104/271 (38%), Gaps = 53/271 (19%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAY 66
ST SQ AA QP +Q T AY QQ + P ++S + A+ +
Sbjct: 571 STLSQQAAYP-------QPQSQQSQQT-AYSQQRFPP---PQELSQDSFGSQASSAPSMT 619
Query: 67 ATSYGQPPTGYTTPTAPQAYSQ--------PVQGYGTGAYDTTTATVTTTQA--SYAAQS 116
++ GQ + + P + P+ G + +T+ ++++Q S AQS
Sbjct: 620 SSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQS 679
Query: 117 AY---------GTQPAYPAYGQQPAATAPTRP---QDGNKPTETSQPQSSTG-------- 156
+ G + P+ PA+ A +R P P+ +G
Sbjct: 680 PFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHP 739
Query: 157 GYNQPSL----GYGQSNYSYPQVPGSYPMQPVTA-PPSYPPTSYSSTQPTSYDQSSYSQQ 211
NQ S+ GY Q N PQ+P QP +A P P T SY Q+S
Sbjct: 740 SMNQSSIAQDRGYMQRN---PQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNS---M 793
Query: 212 NTYG-QPSSYGQQSSYGQQSSYGQQPPTSYP 241
+YG Q YG Q Y +Q +Y P +YP
Sbjct: 794 GSYGPQGGQYGPQGGYPRQPNYNALPNANYP 824
Score = 35.8 bits (81), Expect = 0.060
Identities = 64/295 (21%), Positives = 94/295 (31%), Gaps = 39/295 (13%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAY 66
S + AAA + + Q + G A Q+ G Y P S+ Y
Sbjct: 159 SAVAAAAAAVFHQQHGGQQSPGLA-ALQSGGGGGLEPYAGPQQNSHDHGFPNHQYN---- 213
Query: 67 ATSYGQPPTGYTTPTAPQAYSQP---VQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPA 123
SY + Y P A S P G G A + +++ ++ ++ S++ Q
Sbjct: 214 --SYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF 271
Query: 124 YPAYGQQPAATAPTRPQDGNKPT--ETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPM 181
G P+A PQ PT + SS GY GY +YS G
Sbjct: 272 GAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQ----GYPGGDYSGGPQDGGAGK 327
Query: 182 QPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYP 241
P A + ++ + S +QQ ++ P S G GQ + QP
Sbjct: 328 GP--ADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQP----- 380
Query: 242 PQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSG 296
SS Q R Y Q+ G SGP + G
Sbjct: 381 ----------------SSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPG 419
Score = 32.3 bits (72), Expect = 0.66
Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 9/158 (5%)
Query: 160 QPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSS 219
QP G + PQ P S PPT S+ S+ N+ G +
Sbjct: 1131 QPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDA 1190
Query: 220 Y--GQQSSYGQQSSY----GQQPPTSYPPQTGSYSQAPSQ--YSQQSSSYGQQSSFRQDH 271
+ G S++ +++S G QP + G S P++ Y + G F
Sbjct: 1191 FNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG-SDPFMSSG 1249
Query: 272 PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDR 309
G G +GPG GP G +DR
Sbjct: 1250 QGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDR 1287
Score = 31.6 bits (70), Expect = 1.1
Identities = 46/166 (27%), Positives = 56/166 (33%), Gaps = 30/166 (18%)
Query: 117 AYGTQPAYPAYGQQPAA-TAPTRPQDGNKPTETSQPQ----SSTGGYNQPSLGYGQSNYS 171
A G + YP G T P +GN T QP + G PS Q
Sbjct: 1272 AMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQ 1331
Query: 172 YPQVPGSYPMQPVT-APPSYPPTSYSSTQPTSYDQSSYSQQN----TYGQPSS------Y 220
Q SY Q T PS P + S Q T Y Q + + TYG P+ Y
Sbjct: 1332 QQQRHDSYGNQFSTQGTPSGSP--FPSQQTTMYQQQQQNYKRPMDGTYGPPAKRHEGEMY 1389
Query: 221 GQQSSYGQQSSYGQQPPTSYP------------PQTGSYSQAPSQY 254
S GQ QQ P + P PQ Y+Q + Y
Sbjct: 1390 SVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAY 1435
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 69.3 bits (168), Expect = 5e-12
Identities = 81/267 (30%), Positives = 98/267 (36%), Gaps = 43/267 (16%)
Query: 70 YGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQ 129
+G P Y + T PQ Y +QG A + T S YG Q P Y Q
Sbjct: 415 HGYPGQPYGSQT-PQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQ 473
Query: 130 Q---------PAATAPTRPQDGNKPTETSQPQSSTGGY--NQPSLGYGQSNYSYPQVPGS 178
Q P + P +P+ QPQS +QP S + Q P
Sbjct: 474 QSPHPQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAP 533
Query: 179 YPMQPVTA---PPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSY-------GQ 228
YP Q T P S PP YS Q S Q QQ PS+ QQ++Y Q
Sbjct: 534 YPSQQSTTQQHPQSQPP--YSQPQAQSPYQQQQPQQPA---PSTLSQQAAYPQPQSQQSQ 588
Query: 229 QSSYGQQ--PPTSYPPQTGSYSQAPSQYSQQSSSYGQQ--SSFRQDHPSS---------- 274
Q++Y QQ PP Q SQA S S SS GQ+ + Q PSS
Sbjct: 589 QTAYSQQRFPPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDD 648
Query: 275 --MGVYGQESGGFSGPGENRSMSGPDN 299
MG G S G S G + S N
Sbjct: 649 LPMGTEGALSPGVSTSGISSSQGEQSN 675
Score = 42.7 bits (99), Expect = 5e-04
Identities = 69/271 (25%), Positives = 104/271 (38%), Gaps = 53/271 (19%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAY 66
ST SQ AA QP +Q T AY QQ + P ++S + A+ +
Sbjct: 571 STLSQQAAYP-------QPQSQQSQQT-AYSQQRFPP---PQELSQDSFGSQASSAPSMT 619
Query: 67 ATSYGQPPTGYTTPTAPQAYSQ--------PVQGYGTGAYDTTTATVTTTQA--SYAAQS 116
++ GQ + + P + P+ G + +T+ ++++Q S AQS
Sbjct: 620 SSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQS 679
Query: 117 AY---------GTQPAYPAYGQQPAATAPTRP---QDGNKPTETSQPQSSTG-------- 156
+ G + P+ PA+ A +R P P+ +G
Sbjct: 680 PFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHP 739
Query: 157 GYNQPSL----GYGQSNYSYPQVPGSYPMQPVTA-PPSYPPTSYSSTQPTSYDQSSYSQQ 211
NQ S+ GY Q N PQ+P QP +A P P T SY Q+S
Sbjct: 740 SMNQSSIAQDRGYMQRN---PQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNS---M 793
Query: 212 NTYG-QPSSYGQQSSYGQQSSYGQQPPTSYP 241
+YG Q YG Q Y +Q +Y P +YP
Sbjct: 794 GSYGPQGGQYGPQGGYPRQPNYNALPNANYP 824
Score = 35.8 bits (81), Expect = 0.060
Identities = 64/295 (21%), Positives = 94/295 (31%), Gaps = 39/295 (13%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAY 66
S + AAA + + Q + G A Q+ G Y P S+ Y
Sbjct: 159 SAVAAAAAAVFHQQHGGQQSPGLA-ALQSGGGGGLEPYAGPQQNSHDHGFPNHQYN---- 213
Query: 67 ATSYGQPPTGYTTPTAPQAYSQP---VQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPA 123
SY + Y P A S P G G A + +++ ++ ++ S++ Q
Sbjct: 214 --SYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF 271
Query: 124 YPAYGQQPAATAPTRPQDGNKPT--ETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPM 181
G P+A PQ PT + SS GY GY +YS G
Sbjct: 272 GAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQ----GYPGGDYSGGPQDGGAGK 327
Query: 182 QPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYP 241
P A + ++ + S +QQ ++ P S G GQ + QP
Sbjct: 328 GP--ADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQP----- 380
Query: 242 PQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSG 296
SS Q R Y Q+ G SGP + G
Sbjct: 381 ----------------SSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPG 419
Score = 32.3 bits (72), Expect = 0.66
Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 9/158 (5%)
Query: 160 QPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSS 219
QP G + PQ P S PPT S+ S+ N+ G +
Sbjct: 1131 QPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDA 1190
Query: 220 Y--GQQSSYGQQSSY----GQQPPTSYPPQTGSYSQAPSQ--YSQQSSSYGQQSSFRQDH 271
+ G S++ +++S G QP + G S P++ Y + G F
Sbjct: 1191 FNDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPG-SDPFMSSG 1249
Query: 272 PSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDR 309
G G +GPG GP G +DR
Sbjct: 1250 QGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGGPYDR 1287
>gi|57864582 hornerin [Homo sapiens]
Length = 2850
Score = 68.9 bits (167), Expect = 6e-12
Identities = 90/342 (26%), Positives = 140/342 (40%), Gaps = 51/342 (14%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAY 66
ST+ Q + G S+ Q G +Q++ +YGQQ G+ P+ + + +
Sbjct: 2261 STFDQEGSSTGQSSSHGQHGSGSSQSS-SYGQQGSGSGQSPSRGRHGSG--------SGH 2311
Query: 67 ATSYGQPPTGYTTPTAPQAY-SQPVQGYGTGAYDTTTATVTTTQASYAAQ--SAYGTQPA 123
++SYGQ +G ++ + S Q G G +++++ Q+S Q S G +
Sbjct: 2312 SSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSS-----WQSSGYTQHGSGSGHSSS 2366
Query: 124 YPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVP------- 176
Y +G + ++ + + +S Q +G ++ SLG+GQ Q P
Sbjct: 2367 YEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSG--SRQSLGHGQHGSGSGQSPSPSRGRH 2424
Query: 177 GSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS-----QQNTYGQPSSYGQQ-SSYGQQS 230
GS Q + P + +SS++ S +S +++ GQ S YGQ SS G S
Sbjct: 2425 GSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSS 2484
Query: 231 SYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGE 290
++GQ GS S S Q +S GQ SS G +G S SG G
Sbjct: 2485 THGQH---------GSTSGQSSSCGQHGASSGQSSSH--------GQHGSGSSQSSGYGR 2527
Query: 291 NRSMSG--PDNRGRGRGGFDRGGMSRGGRGGGRGGMGLQSES 330
S SG P + RG G R G G GR Q S
Sbjct: 2528 QGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGS 2569
Score = 68.6 bits (166), Expect = 8e-12
Identities = 88/333 (26%), Positives = 138/333 (41%), Gaps = 51/333 (15%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAY 66
ST+ Q + G S+ Q G +Q++ +YGQQ G+ P+ + + +
Sbjct: 1791 STFDQEGSSTGQSSSHGQHGSGSSQSS-SYGQQGSGSGQSPSRGRHGSG--------SGH 1841
Query: 67 ATSYGQPPTGYTTPTAPQAY-SQPVQGYGTGAYDTTTATVTTTQASYAAQ--SAYGTQPA 123
++SYGQ +G ++ + S Q G G +++++ Q+S Q S G +
Sbjct: 1842 SSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSS-----WQSSGYTQHGSGSGHSSS 1896
Query: 124 YPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVP------- 176
Y +G + ++ + + +S Q +G ++ SLG+GQ Q P
Sbjct: 1897 YEQHGSRSGQSSRGEQHGSSSGSSSSYGQHGSG--SRQSLGHGQHGSGSGQSPSPSRGRH 1954
Query: 177 GSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS-----QQNTYGQPSSYGQQ-SSYGQQS 230
GS Q + P + +SS++ S +S +++ GQ S YGQ SS G S
Sbjct: 1955 GSGSGQSSSYGPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSS 2014
Query: 231 SYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGE 290
++GQ GS S S Q +S GQ SS G +G S SG G
Sbjct: 2015 THGQH---------GSASGQSSSCGQHGASSGQSSSH--------GQHGSGSSQSSGYGR 2057
Query: 291 NRSMSG--PDNRGRGRGGFDRGGMSRGGRGGGR 321
S SG P + RG G R G G GR
Sbjct: 2058 QGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGR 2090
Score = 66.6 bits (161), Expect = 3e-11
Identities = 86/308 (27%), Positives = 125/308 (40%), Gaps = 34/308 (11%)
Query: 40 SYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYD 99
S+G +G + SY++ + GQT+ +GQ +G + YS+ G G +
Sbjct: 321 SHGQHGSGSSYSYSRGHYESGSGQTS---GFGQHESGSGQSSG---YSKHGSGSGHSSSQ 374
Query: 100 TTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQP---QSSTG 156
+ T+ QAS + Q ++ + +YGQ +A+ + + + P Q +G
Sbjct: 375 GQHGS-TSGQASSSGQHGSSSRQS-SSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSG 432
Query: 157 GYNQPS-----LGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYD--QSSYS 209
PS G+G+S+ S P V GS S S TQ S S +
Sbjct: 433 SGQSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHG 492
Query: 210 QQNTYGQPSSYGQQ--SSYGQQSSYGQQPPTS-----YPPQTGSYSQAPS-------QYS 255
Q + SS G++ SS G SSYGQ S + Q+PS S
Sbjct: 493 QHGSRSGQSSRGERQGSSAGSSSSYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGS 552
Query: 256 QQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRG 315
+QSSSYG + SS G Y SG SG G S SG + G G+ G G S
Sbjct: 553 RQSSSYGPH-GYGSGRSSSRGPYESGSGHSSGLGHQESRSG-QSSGYGQHGSSSGHSSTH 610
Query: 316 GRGGGRGG 323
G+ G G
Sbjct: 611 GQHGSTSG 618
Score = 65.9 bits (159), Expect = 5e-11
Identities = 89/342 (26%), Positives = 140/342 (40%), Gaps = 51/342 (14%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAY 66
ST+ Q + G S+ G +Q++ YG +G + S ++ + + G +
Sbjct: 1321 STFDQEGSSTGQSSSYGHRGSGSSQSS------GYGRHGAGSGQSPSRGRHGSGSG---H 1371
Query: 67 ATSYGQPPTGYTTPTAPQAY-SQPVQGYGTGAYDTTTATVTTTQASYAAQ--SAYGTQPA 123
++SYGQ +G ++ + S Q G G +++++ Q+S Q S G +
Sbjct: 1372 SSSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSS-----WQSSGCTQHGSGSGHSSS 1426
Query: 124 YPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVP------- 176
Y +G + ++ + + +S Q +G ++ SLG+GQ Q P
Sbjct: 1427 YEQHGSRSGQSSRGERHGSSSGSSSSYGQHGSG--SRQSLGHGQHGSGSGQSPSPSRGRH 1484
Query: 177 GSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS-----QQNTYGQPSSYGQQ-SSYGQQS 230
GS Q + P + +SS++ SS+S +++ GQ S YGQ SS G S
Sbjct: 1485 GSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSS 1544
Query: 231 SYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGE 290
++GQ GS S S Q +S GQ SS G +G S SG G
Sbjct: 1545 THGQH---------GSTSGQSSSCGQHGASSGQSSSH--------GQHGSGSSQSSGYGR 1587
Query: 291 NRSMSG--PDNRGRGRGGFDRGGMSRGGRGGGRGGMGLQSES 330
S SG P + RG G R G G GR Q S
Sbjct: 1588 QGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGS 1629
Score = 64.7 bits (156), Expect = 1e-10
Identities = 100/376 (26%), Positives = 152/376 (40%), Gaps = 63/376 (16%)
Query: 6 YSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQ-SYGTYGQPTDVSYTQAQTTATYGQT 64
+ + S A+ +G + + G+ Q GQ SYG +G + S + + + GQ+
Sbjct: 870 HESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRSSSSGRHGSGSGQS 929
Query: 65 A---YATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT- 120
+ + +S GQ +GYT + +S + +G+ + ++ + +S + S+YG
Sbjct: 930 SGFGHKSSSGQS-SGYTQHGSGSGHSSSYEQHGSRSGQSSRSE--QHGSSSGSSSSYGQH 986
Query: 121 ------------------QPAYPAYGQ------QPAATAPTRPQDG----NKPTETSQPQ 152
Q P+ G+ Q ++ P R G P E+
Sbjct: 987 GSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRGPYESGSGH 1046
Query: 153 SSTGGYNQP----SLGYGQ--SNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQ- 205
SS G+ + S GYGQ S+ + G + + S SS Q +S+ Q
Sbjct: 1047 SSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSS-SCGQHGASSGQSSSHGQH 1105
Query: 206 -SSYSQQNTYG-QPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQ 263
S SQ + YG Q S GQ +GQ+ S +Q P SY + GS S S Q S G+
Sbjct: 1106 GSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSP-SYG-RHGSGSGRSSSSGQHGSGLGE 1163
Query: 264 QSSFRQDHPSSMGV------YGQESGGFSGPGENRSMSGPDNRGRGRGGF--------DR 309
S F H SS G +G SG SG G++ S SG +RG G
Sbjct: 1164 SSGFGH-HESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQH 1222
Query: 310 GGMSRGGRGGGRGGMG 325
G SR G GR G G
Sbjct: 1223 GSGSRQSSGHGRQGSG 1238
Score = 64.3 bits (155), Expect = 2e-10
Identities = 91/354 (25%), Positives = 140/354 (39%), Gaps = 53/354 (14%)
Query: 2 ASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSY--------GTYGQPTDVSYT 53
AS +S+ + + G S+ + Q Q++ +YGQ G +G + S
Sbjct: 834 ASGHFSSQGRHGSTSGQSSSSGQHDSSSGQSS-SYGQHESASHHASGRGRHGSGSGQSPG 892
Query: 54 QAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYA 113
Q + GQ+ SYG+ +G + ++ S G G+G ++ Q+S
Sbjct: 893 HGQRGSGSGQSP---SYGRHGSG-----SGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGY 944
Query: 114 AQ--SAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYS 171
Q S G +Y +G + ++ + + + +S Q +G ++ SLG+GQ
Sbjct: 945 TQHGSGSGHSSSYEQHGSRSGQSSRSEQHGSSSGSSSSYGQHGSG--SRQSLGHGQHGSG 1002
Query: 172 YPQVP-------GSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYS-----QQNTYGQPSS 219
Q P GS Q + P + +SS++ S +S +++ GQ S
Sbjct: 1003 SGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSG 1062
Query: 220 YGQQ-SSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVY 278
YGQ SS G S++GQ GS S S Q +S GQ SS G +
Sbjct: 1063 YGQHGSSSGHSSTHGQH---------GSTSGQSSSCGQHGASSGQSSSH--------GQH 1105
Query: 279 GQESGGFSGPGENRSMSG--PDNRGRGRGGFDRGGMSRGGRGGGRGGMGLQSES 330
G S SG G S SG P + RG G R G G GR Q S
Sbjct: 1106 GSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGS 1159
Score = 64.3 bits (155), Expect = 2e-10
Identities = 91/350 (26%), Positives = 138/350 (39%), Gaps = 45/350 (12%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTT-----QAYGQQSYGT--YGQPTDVSYTQAQTTA 59
S+Y Q + G+S+ + + G Q++ ++ QS G +G + S + Q +
Sbjct: 1373 SSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGS 1432
Query: 60 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG 119
GQ++ +G + ++ + Q S Q G G + + + + S G
Sbjct: 1433 RSGQSSRGERHGS--SSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHG-SGSG 1489
Query: 120 TQPAYPAYGQQPAATAPTRPQDGNKP-------TETSQPQSSTGGYNQPSLGYGQSNYSY 172
+Y YG ++ P + E+ QSS G + S G+ ++ +
Sbjct: 1490 QSSSYSPYGSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQH 1549
Query: 173 PQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQ--SSYSQQNTYG-QPSSYGQQSSYGQQ 229
G S SS Q +S+ Q S SQ + YG Q S GQ +GQ+
Sbjct: 1550 GSTSGQ--------SSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQR 1601
Query: 230 SSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGV------YGQESG 283
S +Q P SY + GS S S Q S G+ S F H SS G +G SG
Sbjct: 1602 GSGSRQSP-SYG-RHGSGSGRSSSSGQHGSGLGESSGFGH-HESSSGQSSSYSQHGSGSG 1658
Query: 284 GFSGPGENRSMSGPDNRGRGRGGFDR--------GGMSRGGRGGGRGGMG 325
SG G++ S SG +RG G R G SR G GR G G
Sbjct: 1659 HSSGYGQHGSRSGQSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSG 1708
Score = 64.3 bits (155), Expect = 2e-10
Identities = 89/350 (25%), Positives = 136/350 (38%), Gaps = 45/350 (12%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTT-------QAYGQQSYGTYGQPTDVSYTQAQTTA 59
S+Y Q + G+S+ + + G Q++ ++ Y +G + S + Q +
Sbjct: 2313 SSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGS 2372
Query: 60 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG 119
GQ++ +G + ++ + Q S Q G G + + + + S G
Sbjct: 2373 RSGQSSRGERHGS--SSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHG-SGSG 2429
Query: 120 TQPAYPAYGQQPAATAPTRPQD-------GNKPTETSQPQSSTGGYNQPSLGYGQSNYSY 172
+Y YG ++ P + G E+ QSS G + S G+ ++ +
Sbjct: 2430 QSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQH 2489
Query: 173 PQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQ--SSYSQQNTYG-QPSSYGQQSSYGQQ 229
G S SS Q +S+ Q S SQ + YG Q S GQ +GQ+
Sbjct: 2490 GSTSGQ--------SSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQR 2541
Query: 230 SSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGV------YGQESG 283
S +Q P SY + GS S S Q S G+ S F H SS G +G SG
Sbjct: 2542 GSGSRQSP-SYG-RHGSGSGRSSSSGQHGSGLGESSGFGH-HESSSGQSSSYSQHGSGSG 2598
Query: 284 GFSGPGENRSMSGPDNRGRGRGGF--------DRGGMSRGGRGGGRGGMG 325
SG G++ S SG +RG G G SR G GR G G
Sbjct: 2599 HSSGYGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSG 2648
Score = 62.4 bits (150), Expect = 6e-10
Identities = 86/336 (25%), Positives = 134/336 (39%), Gaps = 38/336 (11%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTT-------QAYGQQSYGTYGQPTDVSYTQAQTTA 59
S+Y Q + G+S+ + + G Q++ ++ Y +G + S + Q +
Sbjct: 1843 SSYGQHGSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGS 1902
Query: 60 TYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG 119
GQ++ +G + ++ + Q S Q G G + + + + S G
Sbjct: 1903 RSGQSSRGEQHGS--SSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHG-SGSG 1959
Query: 120 TQPAYPAYGQQPAATAPTRPQD-------GNKPTETSQPQSSTGGYNQPSLGYGQSNYSY 172
+Y YG ++ P + G E+ QSS G + S G+ ++ +
Sbjct: 1960 QSSSYGPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQH 2019
Query: 173 PQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQ--SSYSQQNTYG-QPSSYGQQSSYGQQ 229
G S SS Q +S+ Q S SQ + YG Q S GQ +GQ+
Sbjct: 2020 GSASGQ--------SSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQR 2071
Query: 230 SSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGV------YGQESG 283
S +Q P SY + GS S S Q G+ S F H SS G +G SG
Sbjct: 2072 GSGSRQSP-SYG-RHGSGSGRSSSSGQHGPGLGESSGFGH-HESSSGQSSSYSQHGSGSG 2128
Query: 284 GFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGG 319
SG G++ S SG +RG R G G SR G+ G
Sbjct: 2129 HSSGYGQHGSRSGQSSRGE-RHGSSSGSSSRYGQHG 2163
Score = 62.0 bits (149), Expect = 8e-10
Identities = 91/344 (26%), Positives = 133/344 (38%), Gaps = 43/344 (12%)
Query: 6 YSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTTATYGQT 64
Y + S ++ G+ + + GY Q + G S +G +G + S + Q AT GQ+
Sbjct: 574 YESGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQS 633
Query: 65 AYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAY 124
+ S+GQ +G + + Y Q QG G+G + + + + S+YG +
Sbjct: 634 S---SHGQHGSGSSQSSR---YGQ--QGSGSGQ----SPSRGRHGSDFGHSSSYGQHGSG 681
Query: 125 PAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPV 184
+ Q ++ QSS GY+Q G G S+ S + GS Q
Sbjct: 682 SGWSSSNGPHGSVSGQSSGFGHKSGSGQSS--GYSQH--GSGSSHSSGYRKHGSRSGQSS 737
Query: 185 TAPP----SYPPTSYSSTQPTSYDQSSYSQQNTYG--QPSSYGQQSSYGQQSSYGQQPP- 237
+ S +SY S+ S + +Q + PS SS G SS+GQ
Sbjct: 738 RSEQHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSG 797
Query: 238 TSYPPQTGSYSQAPSQ---YSQQSSSYGQ---QSSFRQDHPSSMGVYGQESGGFSGPGEN 291
TS G Y Q + Q S GQ Q H SS G +G SG S G++
Sbjct: 798 TSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQH 857
Query: 292 RSMSGPDN------------RGRGRGGFDRG-GMSRGGRGGGRG 322
S SG + GRGR G G G RG G G
Sbjct: 858 DSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSG 901
Score = 61.6 bits (148), Expect = 1e-09
Identities = 89/330 (26%), Positives = 137/330 (41%), Gaps = 33/330 (10%)
Query: 3 STDYSTYSQAAAQQ-GYSAYTAQPTQ--GYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTT 58
S+ T+ + Q G+S + + Q GY+Q G S YG +G + S +
Sbjct: 215 SSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSGQSSRGERHR 274
Query: 59 ATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTT-QASYAAQSA 117
++ G ++ SYGQ +G + Q+ QG G+ + + + +S Q
Sbjct: 275 SSSGSSS---SYGQHGSG-----SRQSLGHGRQGSGSRQSPSHVRHGSGSGHSSSHGQHG 326
Query: 118 YGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPG 177
G+ +Y + G + + T G E+ QSS GY++ G G S+ G
Sbjct: 327 SGSSYSY-SRGHYESGSGQT---SGFGQHESGSGQSS--GYSKHGSGSGHSSSQ-----G 375
Query: 178 SYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQ---PSSYGQQSSYGQQSSYGQ 234
+ A S S SS Q +SY Q + +++ G+ S GQ +GQ+ S
Sbjct: 376 QHGSTSGQASSSGQHGS-SSRQSSSYGQHESASRHSSGRGQHSSGSGQSPGHGQRGSGSG 434
Query: 235 QPPTSYPPQTG---SYSQAPS-QYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGE 290
Q P+S TG S S P S SS +G S +H S +G SG SG G+
Sbjct: 435 QSPSSGQHGTGFGRSSSSGPYVSGSGYSSGFGHHES-SSEHSSGYTQHGSGSGHSSGHGQ 493
Query: 291 NRSMSGPDNRGRGRGGFDRGGMSRGGRGGG 320
+ S SG +RG +G S G G G
Sbjct: 494 HGSRSGQSSRGERQGSSAGSSSSYGQHGSG 523
Score = 60.5 bits (145), Expect = 2e-09
Identities = 101/375 (26%), Positives = 149/375 (39%), Gaps = 61/375 (16%)
Query: 2 ASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQ---------------------S 40
AS S+ Q A G S+ Q G +Q++ YG+Q S
Sbjct: 2022 ASGQSSSCGQHGASSGQSSSHGQHGSGSSQSS-GYGRQGSGSGQSPGHGQRGSGSRQSPS 2080
Query: 41 YGTYGQPTDVSYTQAQTTATYGQTA----YATSYGQPPTGYTTPTAPQAYSQPVQGYGT- 95
YG +G + S + Q G+++ + +S GQ + Y+ + +S GYG
Sbjct: 2081 YGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQS-SSYSQHGSGSGHSS---GYGQH 2136
Query: 96 GAYDTTTATVTTTQASYAAQSAYGTQPA----YPAYGQQPAAT--APTRPQDGN-KPTET 148
G+ ++ +S + S YG + +G+Q + + +P+R + G+ +
Sbjct: 2137 GSRSGQSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGSGHSS 2196
Query: 149 SQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQ--S 206
S Q +G S G +S + V G + + +Y S S Q S
Sbjct: 2197 SHGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSGHSS-AYSQHGSGSGHFCSQGQHGS 2255
Query: 207 SYSQQNTYGQP-SSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQ-----YSQQSSS 260
+ Q +T+ Q SS GQ SS+GQ S G +SY Q Q+PS+ S SSS
Sbjct: 2256 TSGQSSTFDQEGSSTGQSSSHGQHGS-GSSQSSSYGQQGSGSGQSPSRGRHGSGSGHSSS 2314
Query: 261 YGQQSSFRQDHPSSMGVYGQESGGFSGPGENRS----MSGPDNRGRGRG--------GFD 308
YGQ S SS G +G SG SG G + S SG G G G G
Sbjct: 2315 YGQHGS-GSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSR 2373
Query: 309 RGGMSRGGRGGGRGG 323
G SRG R G G
Sbjct: 2374 SGQSSRGERHGSSSG 2388
Score = 58.5 bits (140), Expect = 9e-09
Identities = 92/356 (25%), Positives = 146/356 (41%), Gaps = 57/356 (16%)
Query: 6 YSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQ-SYGTYGQPTDVSYTQAQTTATYGQT 64
+ + S+++++ G ++ + G+ + GQ S G +G S + Q + G++
Sbjct: 1679 HGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRS 1738
Query: 65 A----------YATSYGQPPTGYTTPTAPQAYSQPVQGYG----TGAYDTTTATVTTT-- 108
+ +++ +GQ +G +A YSQ G G G + +T+ +T
Sbjct: 1739 SSRGPYESRSGHSSVFGQHESGSGHSSA---YSQHGSGSGHFCSQGQHGSTSGQSSTFDQ 1795
Query: 109 ------QASYAAQSAYGTQPAYPAYGQQPAAT--APTRPQDGNKPTETSQPQSSTGGYNQ 160
Q+S Q G+ + +YGQQ + + +P+R + G+ +S Y Q
Sbjct: 1796 EGSSTGQSSSHGQHGSGSSQS-SSYGQQGSGSGQSPSRGRHGSGSGHSSS-------YGQ 1847
Query: 161 PSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNT-YGQPSS 219
G G S+ S GS + + + +S+ S Y+Q + G SS
Sbjct: 1848 HGSGSGWSSSSGRHGSGSGQS-----------SGFGHHESSSWQSSGYTQHGSGSGHSSS 1896
Query: 220 YGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPS-SMGVY 278
Y Q S QSS G+Q +S + SY Q S S+QS +GQ S PS S G +
Sbjct: 1897 YEQHGSRSGQSSRGEQHGSS-SGSSSSYGQHGSG-SRQSLGHGQHGSGSGQSPSPSRGRH 1954
Query: 279 GQESGGFS-----GPGENRSMS-GPDNRGRGRGGFDRGGMSRGGRGGGRGGMGLQS 328
G SG S G G S S GP G G SR G+ G G G S
Sbjct: 1955 GSGSGQSSSYGPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSS 2010
Score = 57.4 bits (137), Expect = 2e-08
Identities = 86/319 (26%), Positives = 122/319 (38%), Gaps = 68/319 (21%)
Query: 40 SYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYD 99
S+G +G T S + + GQ A+ +GQ +G + Q YSQ G +G +
Sbjct: 790 SHGQHGSGTSCSSSCGHYESGSGQ---ASGFGQHESG-----SGQGYSQ--HGSASGHFS 839
Query: 100 TTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAAT--APTRPQDGNKPTETSQPQSSTGG 157
+ +T+ S ++ + +YGQ +A+ A R + G+ ++ G
Sbjct: 840 SQGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSP-------G 892
Query: 158 YNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQ--SSYSQQNTYG 215
+ Q G GQS PSY S + +S + S Q + +G
Sbjct: 893 HGQRGSGSGQS-------------------PSYGRHGSGSGRSSSSGRHGSGSGQSSGFG 933
Query: 216 QPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQ------ 269
SS GQ S Y Q S G +SY Q GS S S+ Q SS G SS+ Q
Sbjct: 934 HKSSSGQSSGYTQHGS-GSGHSSSYE-QHGSRSGQSSRSEQHGSSSGSSSSYGQHGSGSR 991
Query: 270 ------DHPSSMGVYGQESGGFSGPGENRSMS-GPDNRGRG----RGGFDRGG------- 311
H S G S G G G +S S GP G G RG ++ G
Sbjct: 992 QSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRGPYESGSGHSSGLG 1051
Query: 312 --MSRGGRGGGRGGMGLQS 328
SR G+ G G G S
Sbjct: 1052 HRESRSGQSSGYGQHGSSS 1070
Score = 55.8 bits (133), Expect = 6e-08
Identities = 57/199 (28%), Positives = 83/199 (41%), Gaps = 23/199 (11%)
Query: 140 QDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQ 199
Q+ + TE + + ++ S G+++ V GS ++P T S S +
Sbjct: 109 QEEQEETEKEENKRQESSFSHSSWSAGENDSYSRNVRGS--LKPGTESIS---RRLSFQR 163
Query: 200 PTSYDQSSYS-QQNTYGQPSSYGQQSS--------YGQQSSYGQQPPTSYPPQT----GS 246
S +SYS Q ++YG+ +S QSS GQ +YGQ S + GS
Sbjct: 164 DFSGQHNSYSGQSSSYGEQNSDSHQSSGRGQCGSGSGQSPNYGQHGSGSGQSSSNDTHGS 223
Query: 247 YSQAPSQYSQQSSSYGQQSSFRQ-----DHPSSMGVYGQESGGFSGPGENRSMSGPDNRG 301
S S +SQ SS GQ S + Q H S G +G SG S +RS SG +
Sbjct: 224 GSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSY 283
Query: 302 RGRGGFDRGGMSRGGRGGG 320
G R + G +G G
Sbjct: 284 GQHGSGSRQSLGHGRQGSG 302
Score = 55.5 bits (132), Expect = 7e-08
Identities = 86/327 (26%), Positives = 139/327 (42%), Gaps = 34/327 (10%)
Query: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
S+ S Y + + G S Q G Q+ SYG +G + S + Q + G
Sbjct: 2519 SSQSSGYGRQGSGSGQSPGHGQRGSGSRQSP------SYGRHGSGSGRSSSSGQHGSGLG 2572
Query: 63 QTA----YATSYGQPPTGYTTPTAPQAYSQPVQGYGT-GAYDTTTATVTTTQASYAAQSA 117
+++ + +S GQ + Y+ + +S GYG G+ ++ +S + S
Sbjct: 2573 ESSGFGHHESSSGQS-SSYSQHGSGSGHSS---GYGQHGSRSGQSSRGERHGSSSGSSSH 2628
Query: 118 YGTQPA----YPAYGQQPAAT--APTRPQDGNK-PTETSQPQSSTGGYNQPSLGYGQSNY 170
YG + +G+Q + + +P+R + G+ +S Q +G S G +S
Sbjct: 2629 YGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRL 2688
Query: 171 SYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQ-NTYGQPSSYGQQ-SSYGQ 228
+ V G + S ++YS S S Q +T GQ S++ Q+ SS GQ
Sbjct: 2689 GHSSVFGQHESG------SGHSSAYSQHGSGSGHFCSQGQHGSTSGQSSTFDQEGSSTGQ 2742
Query: 229 QSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGP 288
SSYG + S Q+ Y + + S QS S+G+ S SS G +G SG SG
Sbjct: 2743 SSSYGHRGSGS--SQSSGYGRHGAG-SGQSLSHGRHGS-GSGQSSSYGQHGSGSGQSSGY 2798
Query: 289 GENRSMSGPDNRGRGRGGFDRGGMSRG 315
++ S SG D +GG + G S G
Sbjct: 2799 SQHGSGSGQDGYSYCKGGSNHDGGSSG 2825
Score = 53.9 bits (128), Expect = 2e-07
Identities = 89/389 (22%), Positives = 148/389 (38%), Gaps = 78/389 (20%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQ---------------------SYGTYG 45
S+ Q A G S+ Q G +Q+++ YGQQ SYG +G
Sbjct: 621 SSCGQHGATSGQSSSHGQHGSGSSQSSR-YGQQGSGSGQSPSRGRHGSDFGHSSSYGQHG 679
Query: 46 QPTDVSYTQAQTTATYGQTA---YATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTT 102
+ S + + GQ++ + + GQ +GY+ + ++S + +G+ + ++
Sbjct: 680 SGSGWSSSNGPHGSVSGQSSGFGHKSGSGQS-SGYSQHGSGSSHSSGYRKHGSRSGQSSR 738
Query: 103 ATVTTTQASYAAQSAYGTQPA----YPAYGQQPAAT--APTRPQDGNKPTETSQP----- 151
+ +S S+YG + +G+Q + + +P+R + G+ +S
Sbjct: 739 SE--QHGSSSGLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGS 796
Query: 152 -----------QSSTG---GYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSS 197
+S +G G+ Q G GQ + G + Q S +S
Sbjct: 797 GTSCSSSCGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQ 856
Query: 198 TQPTSYDQSSYSQQNT--------------YGQPSSYGQQ-SSYGQQSSYGQQPP----T 238
+S SSY Q + GQ +GQ+ S GQ SYG+ +
Sbjct: 857 HDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGSGQSPSYGRHGSGSGRS 916
Query: 239 SYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQ-----DHPSSMGVYGQESGGFSGPGENRS 293
S + GS S S + +SSS GQ S + Q H SS +G SG S ++ S
Sbjct: 917 SSSGRHGSGSGQSSGFGHKSSS-GQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRSEQHGS 975
Query: 294 MSGPDNRGRGRGGFDRGGMSRGGRGGGRG 322
SG + G R + G G G G
Sbjct: 976 SSGSSSSYGQHGSGSRQSLGHGQHGSGSG 1004
Score = 53.1 bits (126), Expect = 4e-07
Identities = 76/305 (24%), Positives = 114/305 (37%), Gaps = 57/305 (18%)
Query: 3 STDYSTYSQAA---AQQGYSAYTAQPTQGYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTT 58
S+ YS Y + + +G + + G GQ S YG +G + S T Q
Sbjct: 1491 SSSYSPYGSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG 1550
Query: 59 ATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAY 118
+T GQ++ +G ++ + S GYG Q S + QS
Sbjct: 1551 STSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGR-------------QGSGSGQS-- 1595
Query: 119 GTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGS 178
P +GQ+ + + + P G + + + SS Q G G+S+
Sbjct: 1596 ------PGHGQRGSGSRQS-PSYGRHGSGSGRSSSS----GQHGSGLGESS--------- 1635
Query: 179 YPMQPVTAPPSYPPTSYSSTQPTSYDQ--SSYSQQNTYGQPSSYGQQSSYGQQSSYGQQP 236
+ SS Q +SY Q S + YGQ S QSS G++ +
Sbjct: 1636 ----------GFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSRS 1685
Query: 237 PTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQ-----DHPSSMGVYGQESGGFSGPGEN 291
+ Y Q GS S+ S + +Q S GQ S + H SS G +G SG S G
Sbjct: 1686 SSRY-GQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPY 1744
Query: 292 RSMSG 296
S SG
Sbjct: 1745 ESRSG 1749
Score = 50.8 bits (120), Expect = 2e-06
Identities = 78/275 (28%), Positives = 102/275 (37%), Gaps = 53/275 (19%)
Query: 109 QASYAAQSAYGTQPAYPAYGQQPAATAPTRPQD-----GNKPTETSQPQSSTG---GYNQ 160
Q+S Q G+ + P YGQ + + + D + + SQ +SS+G GY+Q
Sbjct: 188 QSSGRGQCGSGSGQS-PNYGQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQ 246
Query: 161 P------SLGYGQ-SNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYD-QSSYSQQN 212
S GYGQ + S G + SY S Q + Q S S+Q+
Sbjct: 247 HGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSGSRQS 306
Query: 213 TYGQPSSYGQQSSYGQQSSYGQQPP-TSYPPQTGSYSQAPSQ---YSQQSSSYGQQSSFR 268
PS S G SS+GQ +SY G Y Q + Q S GQ S +
Sbjct: 307 ----PSHVRHGSGSGHSSSHGQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYS 362
Query: 269 QD-----HPSSMGVYGQESGGFSGPGENRSMS----------GPDNRGRGRGGFDRG-GM 312
+ H SS G +G SG S G++ S S GRG G G
Sbjct: 363 KHGSGSGHSSSQGQHGSTSGQASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQ 422
Query: 313 S--RGGRGGGRG----------GMGLQSESLVYTS 335
S G RG G G G G S S Y S
Sbjct: 423 SPGHGQRGSGSGQSPSSGQHGTGFGRSSSSGPYVS 457
Score = 50.1 bits (118), Expect = 3e-06
Identities = 57/178 (32%), Positives = 76/178 (42%), Gaps = 42/178 (23%)
Query: 189 SYPPTSYSSTQPTSYDQS----------SYSQQNTYGQPSSYGQQSSY-GQQSSYGQQPP 237
S+ +S+S+ + SY ++ S S++ ++ + S GQ +SY GQ SSYG+Q
Sbjct: 126 SFSHSSWSAGENDSYSRNVRGSLKPGTESISRRLSFQRDFS-GQHNSYSGQSSSYGEQNS 184
Query: 238 TSYPP----QTGSYSQAPSQYSQQSSSYGQ------------QSSFRQDHPSSMG----- 276
S+ Q GS S Y Q S GQ QSS H SS G
Sbjct: 185 DSHQSSGRGQCGSGSGQSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGY 244
Query: 277 -VYGQESGGFSGPGENRSMSGPDNRG---RGRGGF-----DRGGMSRGGRGGGRGGMG 325
+G SG SG G++ S SG +RG R G G SR G GR G G
Sbjct: 245 SQHGSGSGHSSGYGQHGSRSGQSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQGSG 302
Score = 49.3 bits (116), Expect = 5e-06
Identities = 83/346 (23%), Positives = 130/346 (37%), Gaps = 35/346 (10%)
Query: 3 STDYSTYSQAA---AQQGYSAYTAQPTQGYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTT 58
S+ YS Y + + +G + + G GQ S YG +G + S T Q
Sbjct: 2431 SSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHG 2490
Query: 59 ATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAY 118
+T GQ++ +G ++ + S GYG + + + S + QS
Sbjct: 2491 STSGQSSSCGQHGASSGQSSSHGQHGSGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQS-- 2548
Query: 119 GTQPAYPAYGQQPAAT--APTRPQDGNKPTETS---QPQSSTG---GYNQPSLGYGQSNY 170
P+YG+ + + + + Q G+ E+S +SS+G Y+Q G G S+
Sbjct: 2549 ------PSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSG 2602
Query: 171 --SYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNT-YGQPSSYGQQSS-Y 226
+ G S + Y S S + +Q + GQ S G+ S
Sbjct: 2603 YGQHGSRSGQSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSPSRGRHGSGL 2662
Query: 227 GQQSSYGQQPPTSYPPQT-GSYSQA---PSQYSQQSSSYGQQSSFRQD-----HPSSMGV 277
G SS+GQ S + G Y S + Q S G S++ Q H S G
Sbjct: 2663 GHSSSHGQHGSGSGRSSSRGPYESRLGHSSVFGQHESGSGHSSAYSQHGSGSGHFCSQGQ 2722
Query: 278 YGQESGGFSGPGENRSMSGPDNR--GRGRGGFDRGGMSRGGRGGGR 321
+G SG S + S +G + RG G G R G G G+
Sbjct: 2723 HGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQ 2768
Score = 45.8 bits (107), Expect = 6e-05
Identities = 78/333 (23%), Positives = 127/333 (38%), Gaps = 39/333 (11%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQ--- 63
S+ Q A G S+ Q G +Q++ YG+Q G+ P +GQ
Sbjct: 1087 SSCGQHGASSGQSSSHGQHGSGSSQSS-GYGRQGSGSGQSPG------------HGQRGS 1133
Query: 64 -TAYATSYGQPPTGYTTPTAPQAYSQPV-QGYGTGAYDTTTATVTTTQASYAAQ-SAYGT 120
+ + SYG+ +G ++ + + + G G +++++ +SY+ S G
Sbjct: 1134 GSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQ----SSSYSQHGSGSGH 1189
Query: 121 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYP 180
Y +G + ++ R + + +S G ++ S G+G+ P S
Sbjct: 1190 SSGYGQHGSRSGQSS--RGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGHSP-SRG 1246
Query: 181 MQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQ-QSSYGQQSSYGQQPPTS 239
S + S S + Y ++ G S +GQ +S G S+Y Q S
Sbjct: 1247 RHGSGLGHSSSHGQHGSGSGRSSSRGPYESRS--GHSSVFGQHESGSGHSSAYSQHGSGS 1304
Query: 240 ----YPPQTGSYSQAPSQYSQQSSSYGQQSSF-----RQDHPSSMGVYGQESGGFSGPGE 290
Q GS S S + Q+ SS GQ SS+ S G +G SG G
Sbjct: 1305 GHFCSQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQSSGYGRHGAGSGQSPSRGR 1364
Query: 291 NRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGG 323
+ S SG + G+ G G S GR G G
Sbjct: 1365 HGSGSG-HSSSYGQHGSGSGWSSSSGRHGSGSG 1396
>gi|212549553 interleukin enhancer binding factor 3 isoform d [Homo
sapiens]
Length = 898
Score = 59.7 bits (143), Expect = 4e-09
Identities = 62/242 (25%), Positives = 89/242 (36%), Gaps = 41/242 (16%)
Query: 86 YSQPVQGYGTGAYDTTTATVTTTQ----------ASYAAQSAYGTQPAYPAYGQQPAATA 135
Y GYG+ Y +AT +Q AS G Y +Y Q +
Sbjct: 669 YMNAGAGYGSYGYGGNSATAGYSQFYSNGGHSGNASGGGGGGGGGSSGYGSYYQGDNYNS 728
Query: 136 PTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVT--APPSYPPT 193
P P+ K QP GG +PS G G ++ Q SY P + PP
Sbjct: 729 PVPPKHAGK----KQPH---GGQQKPSYGSGYQSHQGQQ--QSYNQSPYSNYGPPQGKQK 779
Query: 194 SYSSTQPTSYDQSSYSQQNTYGQP-----SSYGQQSSYGQQSSYGQQPPTSYPPQTGSYS 248
Y ++ Q SYS N+Y P S Y +S + S G+ SY SY+
Sbjct: 780 GY------NHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYGSGGASYN 833
Query: 249 QAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGR-GRGGF 307
YG S + G Y Q + ++ PG ++ SGP + + +GG+
Sbjct: 834 PG------SHGGYGGGSGGGSSYQGKQGGYSQSN--YNSPGSGQNYSGPPSSYQSSQGGY 885
Query: 308 DR 309
R
Sbjct: 886 GR 887
Score = 57.0 bits (136), Expect = 3e-08
Identities = 55/185 (29%), Positives = 73/185 (39%), Gaps = 24/185 (12%)
Query: 142 GNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPT 201
GN T S GG++ + G G GSY Y +Y+S P
Sbjct: 683 GNSATAGYSQFYSNGGHSGNASGGGGGGGGGSSGYGSY----------YQGDNYNSPVPP 732
Query: 202 SYDQSSYSQQNTYGQPSSYGQ--QSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSS 259
+ + Q + Q SYG QS GQQ SY Q P ++Y P G Y+
Sbjct: 733 KH--AGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQSPYSNYGPPQGKQKG----YNHGQG 786
Query: 260 SYGQQSSFRQDHPSSMGVYGQESG-GFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRG 318
SY +S+ Y ES +SG G SG ++ G G ++ G S GG G
Sbjct: 787 SYSYSNSYNSPGGGGGSDYNYESKFNYSGSG---GRSGGNSYGSGGASYNPG--SHGGYG 841
Query: 319 GGRGG 323
GG GG
Sbjct: 842 GGSGG 846
Score = 40.4 bits (93), Expect = 0.002
Identities = 47/186 (25%), Positives = 58/186 (31%), Gaps = 28/186 (15%)
Query: 156 GGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYG 215
GGY GYG Y Y Y +S + G
Sbjct: 667 GGYMNAGAGYGSYGYGGNSATAGYSQ--------------------FYSNGGHSGNASGG 706
Query: 216 QPSSYGQQSSYG---QQSSYGQQPPTSYP--PQTGSYSQAPSQYSQQSSSYGQQSSFRQD 270
G S YG Q +Y P + Q Q PS S S GQQ S+ Q
Sbjct: 707 GGGGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQS 766
Query: 271 HPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSR---GGRGGGRGGMGLQ 327
S+ G + G++ + S S N G GG D S+ G GG GG
Sbjct: 767 PYSNYGPPQGKQKGYNHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYG 826
Query: 328 SESLVY 333
S Y
Sbjct: 827 SGGASY 832
Score = 36.2 bits (82), Expect = 0.046
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 284 GFSGPGENRSMSGPDNRGRGRGGFDRG-GMSRGGRGGGRGG 323
G GP N P+ RGRGRGG RG G RG G GG
Sbjct: 628 GMGGPMHNEVPPPPNLRGRGRGGSIRGRGRGRGFGGANHGG 668
Score = 31.2 bits (69), Expect = 1.5
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 287 GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGLQSESLVYT 334
G G S+ G RGRG GG + GG G G G G G S + Y+
Sbjct: 645 GRGRGGSIRGR-GRGRGFGGANHGGYMNAGAGYGSYGYGGNSATAGYS 691
>gi|24234750 interleukin enhancer binding factor 3 isoform a [Homo
sapiens]
Length = 894
Score = 59.7 bits (143), Expect = 4e-09
Identities = 62/242 (25%), Positives = 89/242 (36%), Gaps = 41/242 (16%)
Query: 86 YSQPVQGYGTGAYDTTTATVTTTQ----------ASYAAQSAYGTQPAYPAYGQQPAATA 135
Y GYG+ Y +AT +Q AS G Y +Y Q +
Sbjct: 665 YMNAGAGYGSYGYGGNSATAGYSQFYSNGGHSGNASGGGGGGGGGSSGYGSYYQGDNYNS 724
Query: 136 PTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVT--APPSYPPT 193
P P+ K QP GG +PS G G ++ Q SY P + PP
Sbjct: 725 PVPPKHAGK----KQPH---GGQQKPSYGSGYQSHQGQQ--QSYNQSPYSNYGPPQGKQK 775
Query: 194 SYSSTQPTSYDQSSYSQQNTYGQP-----SSYGQQSSYGQQSSYGQQPPTSYPPQTGSYS 248
Y ++ Q SYS N+Y P S Y +S + S G+ SY SY+
Sbjct: 776 GY------NHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYGSGGASYN 829
Query: 249 QAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGR-GRGGF 307
YG S + G Y Q + ++ PG ++ SGP + + +GG+
Sbjct: 830 PG------SHGGYGGGSGGGSSYQGKQGGYSQSN--YNSPGSGQNYSGPPSSYQSSQGGY 881
Query: 308 DR 309
R
Sbjct: 882 GR 883
Score = 57.0 bits (136), Expect = 3e-08
Identities = 55/185 (29%), Positives = 73/185 (39%), Gaps = 24/185 (12%)
Query: 142 GNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPT 201
GN T S GG++ + G G GSY Y +Y+S P
Sbjct: 679 GNSATAGYSQFYSNGGHSGNASGGGGGGGGGSSGYGSY----------YQGDNYNSPVPP 728
Query: 202 SYDQSSYSQQNTYGQPSSYGQ--QSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSS 259
+ + Q + Q SYG QS GQQ SY Q P ++Y P G Y+
Sbjct: 729 KH--AGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQSPYSNYGPPQGKQKG----YNHGQG 782
Query: 260 SYGQQSSFRQDHPSSMGVYGQESG-GFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRG 318
SY +S+ Y ES +SG G SG ++ G G ++ G S GG G
Sbjct: 783 SYSYSNSYNSPGGGGGSDYNYESKFNYSGSG---GRSGGNSYGSGGASYNPG--SHGGYG 837
Query: 319 GGRGG 323
GG GG
Sbjct: 838 GGSGG 842
Score = 40.4 bits (93), Expect = 0.002
Identities = 47/186 (25%), Positives = 58/186 (31%), Gaps = 28/186 (15%)
Query: 156 GGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYG 215
GGY GYG Y Y Y +S + G
Sbjct: 663 GGYMNAGAGYGSYGYGGNSATAGYSQ--------------------FYSNGGHSGNASGG 702
Query: 216 QPSSYGQQSSYG---QQSSYGQQPPTSYP--PQTGSYSQAPSQYSQQSSSYGQQSSFRQD 270
G S YG Q +Y P + Q Q PS S S GQQ S+ Q
Sbjct: 703 GGGGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQS 762
Query: 271 HPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSR---GGRGGGRGGMGLQ 327
S+ G + G++ + S S N G GG D S+ G GG GG
Sbjct: 763 PYSNYGPPQGKQKGYNHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYG 822
Query: 328 SESLVY 333
S Y
Sbjct: 823 SGGASY 828
Score = 36.2 bits (82), Expect = 0.046
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 284 GFSGPGENRSMSGPDNRGRGRGGFDRG-GMSRGGRGGGRGG 323
G GP N P+ RGRGRGG RG G RG G GG
Sbjct: 624 GMGGPMHNEVPPPPNLRGRGRGGSIRGRGRGRGFGGANHGG 664
Score = 31.2 bits (69), Expect = 1.5
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 287 GPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGLQSESLVYT 334
G G S+ G RGRG GG + GG G G G G G S + Y+
Sbjct: 641 GRGRGGSIRGR-GRGRGFGGANHGGYMNAGAGYGSYGYGGNSATAGYS 687
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 58.2 bits (139), Expect = 1e-08
Identities = 90/350 (25%), Positives = 129/350 (36%), Gaps = 63/350 (18%)
Query: 2 ASTDYSTYSQAAAQQGYSAYTAQ---PTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTT 58
+ST ++ + + G SA A T G + Q S + Q T+ + T T
Sbjct: 1612 SSTPIASSTTSIVAPGPSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSAT 1671
Query: 59 ATYGQTAYATS---YGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATV----TTTQAS 111
+GQ A +T+ +GQ TG T TA G+ + A+ TT V T QAS
Sbjct: 1672 PVFGQVAASTAPSLFGQQ-TGSTASTAAATPQVSSSGFSSPAFGTTAPGVFGQTTFGQAS 1730
Query: 112 YAAQSAYG-------TQPAY---PAYGQQPAATAPTRPQDG--NKPTETSQPQSSTGGYN 159
QSA +QP + PA+GQ PA++ PT + TS S + G +
Sbjct: 1731 VFGQSASSAASVFSFSQPGFSSVPAFGQ-PASSTPTSTSGSVFGAASSTSSSSSFSFGQS 1789
Query: 160 QPSLG---YGQSNY-SYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYG 215
P+ G +GQSN ++ Q PG V S T+ +++ + S + NT
Sbjct: 1790 SPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQASGFGSSNT-- 1847
Query: 216 QPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSM 275
S +GQ +S G +GQQSS
Sbjct: 1848 -------GSVFGQAASTG------------------------GIVFGQQSSSSSGSVFGS 1876
Query: 276 GVYGQESGGFSGPGENRSMSGPDNR--GRGRGGFDRGGMSRGGRGGGRGG 323
G G+ G FSG G S + GGF S G G
Sbjct: 1877 GNTGRGGGFFSGLGGKPSQDAANKNPFSSASGGFGSTATSNTSNLFGNSG 1926
Score = 53.9 bits (128), Expect = 2e-07
Identities = 75/336 (22%), Positives = 131/336 (38%), Gaps = 49/336 (14%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQ---------SYGTYGQPTDVSYTQAQT 57
S S +AA +AQ Q QT+ + ++ + GT T + A+
Sbjct: 1508 SEVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQPAVSNSGTAASSTSLVALSAEA 1567
Query: 58 T-ATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQ- 115
T AT G T P + ++ P + + G A +T++ + ++ S A
Sbjct: 1568 TPATTGVPDARTEAVPPASSFSVPGQTAVTAAAISSAGPVAVETSSTPIASSTTSIVAPG 1627
Query: 116 -----SAYGTQPAYPA-YGQQPAATAPTRPQDGNKPTETSQPQSSTGGY----NQPSLGY 165
+A+GT + + + Q PAA++ + T T+ + G PSL +
Sbjct: 1628 PSAEAAAFGTVTSGSSVFAQPPAASSSSAFNQLTNNTATAPSATPVFGQVAASTAPSL-F 1686
Query: 166 GQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYG---- 221
GQ S + P + + ++ +T P + Q+++ Q + +GQ +S
Sbjct: 1687 GQQTGSTASTAAATPQ---VSSSGFSSPAFGTTAPGVFGQTTFGQASVFGQSASSAASVF 1743
Query: 222 --QQSSYGQQSSYGQQPPTSYPPQTGS--YSQAPSQYSQQSSSYGQQSSFRQDHPSSMGV 277
Q + ++G QP +S P T + A S S S S+GQ S + G+
Sbjct: 1744 SFSQPGFSSVPAFG-QPASSTPTSTSGSVFGAASSTSSSSSFSFGQSSP-----NTGGGL 1797
Query: 278 YGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMS 313
+GQ + G + G G+GG GG S
Sbjct: 1798 FGQSNAPAFG----------QSPGFGQGGSVFGGTS 1823
Score = 42.4 bits (98), Expect = 6e-04
Identities = 63/247 (25%), Positives = 93/247 (37%), Gaps = 38/247 (15%)
Query: 45 GQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTAT 104
GQ D + + ++T + T P+G+ TAP PV G T T++AT
Sbjct: 1340 GQADDSTKPTNKASSTSLTSTQPTKTSGVPSGFNF-TAP-----PVLGKHTEPPVTSSAT 1393
Query: 105 VTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLG 164
TT+ A AA S T +G P TS S + SL
Sbjct: 1394 -TTSVAPPAATSTSSTA----VFGSLPV---------------TSAGSSGVISFGGTSLS 1433
Query: 165 YGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSY----SQQNTYGQPSSY 220
G++++S+ GS P + PPT+ ++ PTS+ S+ S T P S
Sbjct: 1434 AGKTSFSF----GSQQTNSTVPPSAPPPTTAATPLPTSFPTLSFGSLLSSATTPSLPMSA 1489
Query: 221 GQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQ 280
G+ + S+ ++P S S S A QQS+ Q D V Q
Sbjct: 1490 GRSTEEATSSALPEKPGDS----EVSASAASLLEEQQSAQLPQAPPQTSDSVKKEPVLAQ 1545
Query: 281 ESGGFSG 287
+ SG
Sbjct: 1546 PAVSNSG 1552
Score = 40.8 bits (94), Expect = 0.002
Identities = 69/368 (18%), Positives = 119/368 (32%), Gaps = 85/368 (23%)
Query: 7 STYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQ------TTAT 60
+T+ QA+ G SA +A ++Q G S +GQP + T ++T
Sbjct: 1724 TTFGQASVF-GQSASSAASVFSFSQP----GFSSVPAFGQPASSTPTSTSGSVFGAASST 1778
Query: 61 YGQTAYATSYGQPPTG---YTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQAS---YAA 114
++++ P TG + AP P G G + T+A TT S +
Sbjct: 1779 SSSSSFSFGQSSPNTGGGLFGQSNAPAFGQSPGFGQGGSVFGGTSAATTTAATSGFSFCQ 1838
Query: 115 QSAYGTQPAYPAYGQQPAATAPTRPQDGNKPT---------------------ETSQPQS 153
S +G+ +GQ + Q + + + SQ +
Sbjct: 1839 ASGFGSSNTGSVFGQAASTGGIVFGQQSSSSSGSVFGSGNTGRGGGFFSGLGGKPSQDAA 1898
Query: 154 STGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSS------ 207
+ ++ S G+G + S + + +S+ +PT S
Sbjct: 1899 NKNPFSSASGGFGSTATS--NTSNLFGNSGAKTFGGFASSSFGEQKPTGTFSSGGGSVAS 1956
Query: 208 ----YSQQN---------TYGQPSSYGQQSSYGQQSSYGQQPPTSYP------------- 241
+S N +G P ++G +G ++G P + P
Sbjct: 1957 QGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGSAPAFTSPLGSTGGKVFGEGT 2016
Query: 242 -------------PQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGP 288
T S+ SQ + S QQ+S S +G +GGFS
Sbjct: 2017 AAASAGGFGFGSSSNTTSFGTLASQNAPTFGSLSQQTSGFGTQSSGFSGFGSGTGGFSFG 2076
Query: 289 GENRSMSG 296
N S+ G
Sbjct: 2077 SNNSSVQG 2084
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 56.6 bits (135), Expect = 3e-08
Identities = 74/321 (23%), Positives = 108/321 (33%), Gaps = 14/321 (4%)
Query: 14 AQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQP 73
A Q Y T ++G + ++ + S G+ T V Q Q + Q
Sbjct: 96 APQQYIVVTV--SEGAMRASETVSEASPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQA 153
Query: 74 PTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAA 133
G+ +P P Q T +A ++ + + +GTQ + Q P
Sbjct: 154 KPGHVSPLQLTNIQVPQQALPTQRLVVQSAA-PGSKGGQVSLTVHGTQQVHSPPEQSPVQ 212
Query: 134 TAPTRPQDGNKPTETSQPQSSTGGYNQ--PSLGYGQSNYSYPQVPGSYPMQPVTAPPSYP 191
+ + PT T Q G Q P + PQ P P+QP+T P
Sbjct: 213 ANSSSSKTAGAPTGTVPQQLQVHGVQQSVPVTQERSVVQATPQAPKPGPVQPLTVQGLQP 272
Query: 192 PTSYSSTQPTSYDQSS--YSQQNTY--GQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSY 247
Q YS Q Y G +SY + SY + P + T Y
Sbjct: 273 VHVAQEVQQLQQVPVPHVYSSQVQYVEGGDASYTASAIRSSTYSYPETPLYTQTASTSYY 332
Query: 248 SQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQE---SGGFSGPGENRSMSGPDNRGRGR 304
A + + Q S+ + M V G + S +G G + S G + G G
Sbjct: 333 EAAGT--ATQVSTPATSQAVASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSGGGGG 390
Query: 305 GGFDRGGMSRGGRGGGRGGMG 325
GG GG G GGG G G
Sbjct: 391 GGGGGGGGGSGSTGGGGSGAG 411
Score = 34.7 bits (78), Expect = 0.13
Identities = 46/173 (26%), Positives = 54/173 (31%), Gaps = 19/173 (10%)
Query: 103 ATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQ-------SST 155
AT T+ A + Q A Q P P PQ PT + PQ S
Sbjct: 2 ATQAYTELQAAPPPSQPPQAPPQAQPQPPPPPPPAAPQPPQPPTAAATPQPQYVTELQSP 61
Query: 156 GGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAP-PSYPPTSY---------SSTQPTSYDQ 205
QP G Q P VP P QP AP PS P Y T +
Sbjct: 62 QPQAQPPGGQKQYVTELPAVPA--PSQPTGAPTPSPAPQQYIVVTVSEGAMRASETVSEA 119
Query: 206 SSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQS 258
S S + G P+ QQ QQ Q + P Q QQ+
Sbjct: 120 SPGSTASQTGVPTQVVQQVQGTQQRLLVQTSVQAKPGHVSPLQLTNIQVPQQA 172
>gi|26667219 eyes absent 1 isoform c [Homo sapiens]
Length = 557
Score = 56.2 bits (134), Expect = 4e-08
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 22/221 (9%)
Query: 10 SQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYG--TYGQPTDVSYTQAQTTATYGQTAYA 67
SQ A G + +T Q A T Q YG +YG T+ +Q+Q+ G +Y
Sbjct: 103 SQTMAAYGQTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSPGQTGFLSYG 162
Query: 68 TSYGQPPTGYTTPTAPQAYSQPVQGYGT--GAYDTTTATVTTTQASYAAQSAYGTQPAYP 125
TS+ P G AP +Y + T G Y T ++T + ++Q Y P+YP
Sbjct: 163 TSFSTPQPG----QAPYSYQMQGSSFTTSSGIY-TGNNSLTNSSGFNSSQQDY---PSYP 214
Query: 126 AYGQ-QPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPV 184
++GQ Q A + P + T ++ P+ + Y + P Q V
Sbjct: 215 SFGQGQYAQYYNSSPYPAHYMTSSN---------TSPTTPSTNATYQLQEPPSGITSQAV 265
Query: 185 TAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSS 225
T P + T +S + P S ++ + G+ G++++
Sbjct: 266 TDPTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNN 306
Score = 30.4 bits (67), Expect = 2.5
Identities = 49/201 (24%), Positives = 70/201 (34%), Gaps = 31/201 (15%)
Query: 147 ETSQPQSSTGGYNQ----PSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTS 202
+ + P S G ++ P LG N S M P P S S T T+
Sbjct: 5 DLTSPHSRLSGSSESPSGPKLGNSHIN--------SNSMTPNGTEVKTEPMSSSETASTT 56
Query: 203 YDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYG 262
D S N G S+ G SS+ + ++ PP YP P+ SQ ++YG
Sbjct: 57 ADGSL---NNFSG--SAIGS-SSFSPRPTHQFSPPQIYPSNRPYPHILPTPSSQTMAAYG 110
Query: 263 --------QQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSR 314
QQ++ +P YG S G G P G+ GF G S
Sbjct: 111 QTQFTTGMQQATAYATYPQPGQPYGISSYGIKTEGGLSQSQSP-----GQTGFLSYGTSF 165
Query: 315 GGRGGGRGGMGLQSESLVYTS 335
G+ Q + +T+
Sbjct: 166 STPQPGQAPYSYQMQGSSFTT 186
>gi|56117846 synovial sarcoma translocation, chromosome 18 isoform 1
[Homo sapiens]
Length = 418
Score = 55.1 bits (131), Expect = 1e-07
Identities = 54/256 (21%), Positives = 85/256 (33%), Gaps = 19/256 (7%)
Query: 83 PQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYG----TQPAYPAYGQQPAATAPTR 138
P P+QG G + T +++ +S+ + Y + + P Q +
Sbjct: 128 PGPNHMPMQGPGPNQLNMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPM 187
Query: 139 PQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSST 198
G +P + QP + QP Y+ PQ G + Q P
Sbjct: 188 GNYGPRPNMSMQPNQGPMMHQQPP----SQQYNMPQGGGQH-YQGQQPPMGMMGQVNQGN 242
Query: 199 QPTSYDQSSYSQQNTYGQPSSY-GQQSSYGQQSSYGQQPPTS------YPPQTGSYSQAP 251
Q + G P Y GQ+ YG Q S+G Q P YP Y
Sbjct: 243 HMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQ 302
Query: 252 SQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGG 311
Y +Q + S + + YGQ+ + GP + + G+ G+
Sbjct: 303 PSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG-- 360
Query: 312 MSRGGRGGGRGGMGLQ 327
+ G G +GG G Q
Sbjct: 361 -QQQGYGPSQGGPGPQ 375
Score = 38.9 bits (89), Expect = 0.007
Identities = 36/136 (26%), Positives = 45/136 (33%), Gaps = 4/136 (2%)
Query: 152 QSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQ 211
Q G NQ G ++Y Y Q SYP Q P Y + Y Q + Q
Sbjct: 280 QGPPEGMNQQYYPDGHNDYGYQQP--SYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQ 337
Query: 212 NTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYG--QQSSFRQ 269
Q QQ Y Q Y Q P Q G Q P+ Q YG + +
Sbjct: 338 GPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGP 397
Query: 270 DHPSSMGVYGQESGGF 285
P YG + G +
Sbjct: 398 PQPPQQRPYGYDQGQY 413
>gi|19923100 eyes absent 1 isoform b [Homo sapiens]
Length = 592
Score = 55.1 bits (131), Expect = 1e-07
Identities = 70/283 (24%), Positives = 109/283 (38%), Gaps = 36/283 (12%)
Query: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
+ D S + + + G S+++ +PT ++ Q Y + PT S QT A YG
Sbjct: 56 TADGSLNNFSGSAIGSSSFSPRPTHQFSPP-QIYPSNRPYPHILPTPSS----QTMAAYG 110
Query: 63 QTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQS------ 116
QT + T Q T Y T Y QP Q YG +Y A + T +QS
Sbjct: 111 QTQFTTGM-QQATAYAT------YPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGF 163
Query: 117 -AYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQV 175
+YGT + P GQ P + G+ T +S + S G+ S YP
Sbjct: 164 LSYGTSFSTPQPGQAPY----SYQMQGSSFTTSSGIYTGNNSLTNSS-GFNSSQQDYPSY 218
Query: 176 P----GSYPMQPVTAP-PSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQS 230
P G Y ++P P++ TS +++ T ++Y Q PS Q+ +
Sbjct: 219 PSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQE---PPSGITSQAVTDPTA 275
Query: 231 SYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPS 273
Y T + P T + + S + R ++PS
Sbjct: 276 EYS----TIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPS 314
>gi|26667216 eyes absent 1 isoform b [Homo sapiens]
Length = 592
Score = 55.1 bits (131), Expect = 1e-07
Identities = 70/283 (24%), Positives = 109/283 (38%), Gaps = 36/283 (12%)
Query: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
+ D S + + + G S+++ +PT ++ Q Y + PT S QT A YG
Sbjct: 56 TADGSLNNFSGSAIGSSSFSPRPTHQFSPP-QIYPSNRPYPHILPTPSS----QTMAAYG 110
Query: 63 QTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQS------ 116
QT + T Q T Y T Y QP Q YG +Y A + T +QS
Sbjct: 111 QTQFTTGM-QQATAYAT------YPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGF 163
Query: 117 -AYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQV 175
+YGT + P GQ P + G+ T +S + S G+ S YP
Sbjct: 164 LSYGTSFSTPQPGQAPY----SYQMQGSSFTTSSGIYTGNNSLTNSS-GFNSSQQDYPSY 218
Query: 176 P----GSYPMQPVTAP-PSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQS 230
P G Y ++P P++ TS +++ T ++Y Q PS Q+ +
Sbjct: 219 PSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQE---PPSGITSQAVTDPTA 275
Query: 231 SYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPS 273
Y T + P T + + S + R ++PS
Sbjct: 276 EYS----TIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPS 314
>gi|26667222 eyes absent 1 isoform a [Homo sapiens]
Length = 559
Score = 55.1 bits (131), Expect = 1e-07
Identities = 70/283 (24%), Positives = 109/283 (38%), Gaps = 36/283 (12%)
Query: 3 STDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYG 62
+ D S + + + G S+++ +PT ++ Q Y + PT S QT A YG
Sbjct: 23 TADGSLNNFSGSAIGSSSFSPRPTHQFSPP-QIYPSNRPYPHILPTPSS----QTMAAYG 77
Query: 63 QTAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQS------ 116
QT + T Q T Y T Y QP Q YG +Y A + T +QS
Sbjct: 78 QTQFTTGM-QQATAYAT------YPQPGQPYGISSYGALWAGIKTEGGLSQSQSPGQTGF 130
Query: 117 -AYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQV 175
+YGT + P GQ P + G+ T +S + S G+ S YP
Sbjct: 131 LSYGTSFSTPQPGQAPY----SYQMQGSSFTTSSGIYTGNNSLTNSS-GFNSSQQDYPSY 185
Query: 176 P----GSYPMQPVTAP-PSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQS 230
P G Y ++P P++ TS +++ T ++Y Q PS Q+ +
Sbjct: 186 PSFGQGQYAQYYNSSPYPAHYMTSSNTSPTTPSTNATYQLQE---PPSGITSQAVTDPTA 242
Query: 231 SYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPS 273
Y T + P T + + S + R ++PS
Sbjct: 243 EYS----TIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPS 281
>gi|6631075 BCL2-associated athanogene 4 [Homo sapiens]
Length = 457
Score = 55.1 bits (131), Expect = 1e-07
Identities = 65/257 (25%), Positives = 93/257 (36%), Gaps = 52/257 (20%)
Query: 67 ATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTT------TATVTTTQASYA---AQSA 117
+T+ + P T P P+ Q + Y GAY T T + + A YA Q++
Sbjct: 105 STARSRAPYPSTYPVRPELQGQSLNSYTNGAYGPTYPPGPGANTASYSGAYYAPGYTQTS 164
Query: 118 YGTQ--PAYPAYGQQPAATA----PTRPQDGNKPTETSQ----PQSSTGGYNQPSLGYGQ 167
Y T+ Y + G P + P + P Q P S G P YG
Sbjct: 165 YSTEVPSTYRSSGNSPTPVSRWIYPQQDCQTEAPPLRGQVPGYPPSQNPGMTLPHYPYGD 224
Query: 168 SNYSYPQV-------------PGSYPMQP----VTAPPSYPPTSYSSTQPTSYDQSSYSQ 210
N S PQ PG+Y M ++ PS PP + T+ TS SS S
Sbjct: 225 GNRSVPQSGPTVRPQEDAWASPGAYGMGGRYPWPSSAPSAPPGNLYMTESTSPWPSSGSP 284
Query: 211 QNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPS-------------QYSQQ 257
Q+ P + SSY S ++P Y + + QYS +
Sbjct: 285 QSPPSPPVQQPKDSSYPYSQSDQSMNRHNFPCSVHQYESSGTVNNDDSDLLDSQVQYSAE 344
Query: 258 SSSYGQQSSFRQDHPSS 274
YG +S DHP++
Sbjct: 345 PQLYGNATS---DHPNN 358
>gi|56699409 RNA binding motif protein, X-linked [Homo sapiens]
Length = 391
Score = 54.7 bits (130), Expect = 1e-07
Identities = 61/182 (33%), Positives = 76/182 (41%), Gaps = 30/182 (16%)
Query: 164 GYG-QSNYSYPQVPGSYPMQPVTAPP---SYPPTSYSSTQPTSYDQSSYSQQNTYGQPSS 219
GY + +YS P S + PP +Y +SS++ Y YS ++ YG+
Sbjct: 213 GYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRD-DYPSRGYSDRDGYGRDRD 271
Query: 220 YGQQSSYGQQ----SSYGQQ---PPTSYPPQTGSYSQAPSQYSQQSSSYG----QQSSFR 268
Y S G SYG PPT PP + S YS YG SS R
Sbjct: 272 YSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSR 331
Query: 269 QDHPSS--MGVYGQESG-------GFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGG 319
D SS V QE G G+ P ++ S S +RG RGG RGG SR RGG
Sbjct: 332 SDLYSSGRDRVGRQERGLPPSMERGYPPPRDSYSSS---SRGAPRGG-GRGG-SRSDRGG 386
Query: 320 GR 321
GR
Sbjct: 387 GR 388
Score = 50.8 bits (120), Expect = 2e-06
Identities = 63/243 (25%), Positives = 82/243 (33%), Gaps = 47/243 (19%)
Query: 128 GQQPAATAPTRPQDGNKPTETSQP----QSSTGGYNQPSLGYGQSNYSYPQ----VPGSY 179
G P P P+ G P + S P +SS+G + + G+ +Y P +P
Sbjct: 145 GPLPVKRGPP-PRSGGPPPKRSAPSGPVRSSSGMGGRAPVSRGRDSYGGPPRREPLPSRR 203
Query: 180 PMQPVTAPPSYPPT-SYSSTQ-PTSYDQSSYSQQNTYGQPSSYGQQSS--------YGQQ 229
+ Y SYSS P+S D Y+ YG SS Y +
Sbjct: 204 DVYLSPRDDGYSTKDSYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDR 263
Query: 230 SSYGQQPPTSYPPQTGSYSQAPSQYSQQSS---------SYGQQSSFRQDHPSSMGVYGQ 280
YG+ S P GSY + Y S SYG S + D+ SS YG
Sbjct: 264 DGYGRDRDYSDHPSGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRY-DDYSSSRDGYGG 322
Query: 281 ESGGFSGPGENRSMSGPDNRGRGRGGF------------------DRGGMSRGGRGGGRG 322
+S + SG D GR G RG GGRGG R
Sbjct: 323 SRDSYSSSRSDLYSSGRDRVGRQERGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRS 382
Query: 323 GMG 325
G
Sbjct: 383 DRG 385
Score = 32.3 bits (72), Expect = 0.66
Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 20/167 (11%)
Query: 6 YSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTA 65
Y Y ++++ Y P++GY+ + Y + P+ SY + + YG +
Sbjct: 243 YRDYGHSSSRDDY------PSRGYSDRDGYGRDRDYSDH--PSGGSYRDSYES--YGNSR 292
Query: 66 YATSYGQPPTGYTTPTAPQAYSQPVQGYG--TGAYDTTTATVTTTQASYAAQSAYGTQPA 123
A PP Y + YS GYG +Y ++ + + ++ + G P+
Sbjct: 293 SAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSDLYSSGRDRVGRQERGLPPS 352
Query: 124 YPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNY 170
G P P+D + P+ G ++ G G+S Y
Sbjct: 353 MER-GYPP-------PRDSYSSSSRGAPRGGGRGGSRSDRGGGRSRY 391
>gi|34101286 zinc finger RNA binding protein [Homo sapiens]
Length = 1074
Score = 54.7 bits (130), Expect = 1e-07
Identities = 72/273 (26%), Positives = 100/273 (36%), Gaps = 47/273 (17%)
Query: 1 MASTDYS--TYSQAAAQQGYSAYTAQPTQGYA----QTTQAYGQQSYGTYGQPTDVSYTQ 54
MA+ +Y T+S AAA + Y+ QP G A T +Y +Y
Sbjct: 23 MATGNYFGFTHSGAAAAAAAAQYSQQPASGVAYSHPTTVASYTVHQAPVAAHTVTAAYAP 82
Query: 55 AQTTATYGQ--------TAYATSYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVT 106
A T + A A +YG PT +T Y+Q Q AT
Sbjct: 83 AAATVAVARPAPVAVAAAATAAAYGGYPTAHT--ATDYGYTQRQQ---EAPPPPPPATTQ 137
Query: 107 TTQASYAAQSAYGTQPAYPA--YGQQPAATA---PTRPQDGNKPTETSQPQSSTGGYNQP 161
Q SY+ + AY + Y QQP ATA Q ET + GY+Q
Sbjct: 138 NYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAETYYQTAPKAGYSQG 197
Query: 162 SLGYGQSNY-----------------SYPQVPGSYPMQPV----TAPPSYPPTSYSSTQP 200
+ Y Q+ ++ P S +QPV T PSY ++ ST
Sbjct: 198 ATQYTQAQQTRQVTAIKPATPSPATTTFSIYPVSSTVQPVAAAATVVPSYTQSATYSTTA 257
Query: 201 TSYDQSSYS--QQNTYGQPSSYGQQSSYGQQSS 231
+Y +SYS + Y SSY QQ Q+ +
Sbjct: 258 VTYSGTSYSGYEAAVYSAASSYYQQQQQQQKQA 290
Score = 41.6 bits (96), Expect = 0.001
Identities = 51/205 (24%), Positives = 74/205 (36%), Gaps = 29/205 (14%)
Query: 70 YGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQ 129
+G +G A YSQ ++ TT A+ T QA AA + AY
Sbjct: 29 FGFTHSGAAAAAAAAQYSQQPASGVAYSHPTTVASYTVHQAPVAAHTVTA------AYAP 82
Query: 130 QPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPS 189
A A RP + ++ GGY + ++Y Y Q + APP
Sbjct: 83 AAATVAVARPAP--VAVAAAATAAAYGGY---PTAHTATDYGYTQ-------RQQEAPPP 130
Query: 190 YPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTG---- 245
PP + T Q SYS + +Y + Y Q ++ + PQ
Sbjct: 131 PPPAT------TQNYQDSYSYVRSTAPAVAYDSKQYYQQPTATAAAVAAAAQPQPSVAET 184
Query: 246 SYSQAP-SQYSQQSSSYGQQSSFRQ 269
Y AP + YSQ ++ Y Q RQ
Sbjct: 185 YYQTAPKAGYSQGATQYTQAQQTRQ 209
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 53.9 bits (128), Expect = 2e-07
Identities = 70/269 (26%), Positives = 102/269 (37%), Gaps = 26/269 (9%)
Query: 8 TYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTD---VSYTQAQTTATYGQT 64
T S + +A T Q T G T + T Q T S TT+T T
Sbjct: 1265 TASSGEPPRPTTAVTPQATSGLPPTATLRSTATKPTVTQATTRATASTASPATTSTAQST 1324
Query: 65 AYAT-SYGQPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPA 123
T + P T T+PT P++ +Q + G TTAT TT A + T P
Sbjct: 1325 TRTTMTLPTPATSGTSPTLPKSTNQELPG--------TTATQTTGPRPTPASTTGPTTPQ 1376
Query: 124 YPAYGQQPAATAPTRPQDGNKPTETSQPQSS----TGGYNQPSLGYGQSNYSYPQVPGSY 179
P +P AT T+ + + T P ++ T G PS G + +
Sbjct: 1377 -PGQPTRPTATETTQTRTTTEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTYPT 1435
Query: 180 PMQPVTAPPSY-PPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPT 238
P P T P++ PP S S P+++ + T+ Q ++ S+ + G PP
Sbjct: 1436 PSHPETTLPTHVPPFSTSLVTPSTHTVIT----PTHAQMAT----SASNHSAPTGTIPPP 1487
Query: 239 SYPPQTGSYSQAPSQYSQQSSSYGQQSSF 267
+ TGS AP S + SSF
Sbjct: 1488 TTLKATGSTHTAPPITPTTSGTSQAHSSF 1516
Score = 47.4 bits (111), Expect = 2e-05
Identities = 59/248 (23%), Positives = 94/248 (37%), Gaps = 19/248 (7%)
Query: 23 AQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTT------ATYGQTAYATSYGQPPTG 76
++PTQ + T + + G ++T A T AT + S G+PP
Sbjct: 1215 SRPTQVWPMTGTSTTIGLLSSTGPSPSSNHTPASPTQTPLLPATLTSSKPTASSGEPPRP 1274
Query: 77 YTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAP 136
TT PQA S G A +TAT T + +A PA + Q T
Sbjct: 1275 -TTAVTPQATS----GLPPTATLRSTATKPTVTQATTRATASTASPATTSTAQSTTRTTM 1329
Query: 137 TRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYP--PTS 194
T P T + P+S+ NQ G + + P+ + P T P P PT+
Sbjct: 1330 TLPTPATSGTSPTLPKST----NQELPGTTATQTTGPRPTPASTTGPTTPQPGQPTRPTA 1385
Query: 195 YSSTQPTSYDQSSYSQ--QNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPS 252
+TQ + + + Q T+ P++ S G ++ T+YP + + P+
Sbjct: 1386 TETTQTRTTTEYTTPQTPHTTHSPPTAGSPVPSTGPVTATSFHATTTYPTPSHPETTLPT 1445
Query: 253 QYSQQSSS 260
S+S
Sbjct: 1446 HVPPFSTS 1453
Score = 45.4 bits (106), Expect = 8e-05
Identities = 65/264 (24%), Positives = 100/264 (37%), Gaps = 29/264 (10%)
Query: 4 TDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQ 63
T ++T+S +S+ T T QTT Y S+ PT V
Sbjct: 1964 TPFTTHSPPTGSSPFSS-TGPMTATSFQTTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTH 2022
Query: 64 TAYATSYGQPPTG---YTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGT 120
T T++ Q T ++TPT P TG+ T TT + S++ T
Sbjct: 2023 TVIITTHTQMATSASIHSTPTG--TVPPPTTLKATGSTHTAPPMTVTTSGTSQTHSSFST 2080
Query: 121 QPAYPAYGQQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYP-QVPGSY 179
A ++ +++ PQ+ + S+P SS P L + S Q+ S+
Sbjct: 2081 ATASSSF----ISSSSWLPQNSS-----SRPPSSPITTQLPHLSSATTPVSTTNQLSSSF 2131
Query: 180 PMQPVTAPP---SYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQP 236
P +AP SY P+S+SS Q +S + G SS+ + S G
Sbjct: 2132 SPSP-SAPSTVSSYVPSSHSSPQTSS---------PSVGTSSSFVSAPVHSTTLSSGSHS 2181
Query: 237 PTSYPPQTGSYSQAPSQYSQQSSS 260
S P T S S +P S ++S
Sbjct: 2182 SLSTHPTTASVSASPLFPSSPAAS 2205
Score = 40.8 bits (94), Expect = 0.002
Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 28/252 (11%)
Query: 26 TQGYAQTTQAYGQQSYGT--YGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAP 83
T G +Q + T + + + +A +T+T T TS G PP TT
Sbjct: 1675 TSGTSQALSSLNTAKTSTSLHSHTSSTHHAEATSTSTTNITPNPTSTGTPPMTVTTSGTS 1734
Query: 84 QAYSQ-PVQGYGTGAYDTTTAT----VTTTQASYAAQSAYGTQPAYPAYGQQPAATA--P 136
Q+ S T + T++T VT+T + + T P A ++ P
Sbjct: 1735 QSRSSFSTAKTSTSLHSHTSSTHHPEVTSTSTTSITPNHTSTGTRTPVAHTTSATSSRLP 1794
Query: 137 TRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPT-SY 195
T + PT T+ P SSTG S Q+ +YP P P T P++ P+ S
Sbjct: 1795 TPFTTHSPPTGTT-PISSTGPVTATSF---QTTTTYPT-----PSHPHTTLPTHVPSFST 1845
Query: 196 SSTQPTSYDQ--SSYSQQNT----YGQPS-SYGQQSSYGQQSSYGQQPPTSYPPQTGSYS 248
S P+++ +++Q T + P+ + ++ S PP + P T S
Sbjct: 1846 SLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPTTIKATGSTHTAPPMT--PTTSGTS 1903
Query: 249 QAPSQYSQQSSS 260
Q+PS +S +S
Sbjct: 1904 QSPSSFSTAKTS 1915
Score = 36.2 bits (82), Expect = 0.046
Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 30/256 (11%)
Query: 26 TQGYAQTTQAYGQQSYGT--YGQPTDVSYTQAQTTATYGQTAYATSYG-QPPTGYTTPTA 82
T G +Q+ ++ T + + + + +T+T T TS G + P +TT
Sbjct: 1730 TSGTSQSRSSFSTAKTSTSLHSHTSSTHHPEVTSTSTTSITPNHTSTGTRTPVAHTTSAT 1789
Query: 83 PQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDG 142
P + T + T T +++T A +++ T YP P T PT
Sbjct: 1790 SSRLPTP---FTTHSPPTGTTPISSTGPVTA--TSFQTTTTYPT-PSHPHTTLPTHVPSF 1843
Query: 143 NKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVP-GSYPMQPV--------TAPPSYPPT 193
+ TS ST P+ ++ S +P G+ P TAPP P T
Sbjct: 1844 S----TSLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPTTIKATGSTHTAPPMTPTT 1899
Query: 194 SYSSTQPTSYDQSSYSQQNTYGQPSSYGQQ-------SSYGQQSSYGQQPPTSYPPQTGS 246
S +S P+S+ + S Y S++ + + + +S G + P ++ S
Sbjct: 1900 SGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITPKHTSTGTRTPVAHTTSASS 1959
Query: 247 YSQAPSQYSQQSSSYG 262
S+ P+ ++ S G
Sbjct: 1960 -SRLPTPFTTHSPPTG 1974
Score = 34.3 bits (77), Expect = 0.17
Identities = 43/196 (21%), Positives = 79/196 (40%), Gaps = 9/196 (4%)
Query: 72 QPPTGYTTPTAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQP 131
QPPT TP P S+P Q + TT +++T S ++ + P
Sbjct: 1203 QPPT---TPQLPTTGSRPTQVWPMTGTSTTIGLLSSTGPSPSSNHTPASPTQTPLLPATL 1259
Query: 132 AATAPTRPQ-DGNKPTETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPV-TAPPS 189
++ PT + +PT PQ+++G P +S + P V + TA P+
Sbjct: 1260 TSSKPTASSGEPPRPTTAVTPQATSG---LPPTATLRSTATKPTVTQATTRATASTASPA 1316
Query: 190 YPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQ 249
T+ S+T+ T + + + P S Q+ G ++ P + TG +
Sbjct: 1317 TTSTAQSTTRTTMTLPTPATSGTSPTLPKSTNQELP-GTTATQTTGPRPTPASTTGPTTP 1375
Query: 250 APSQYSQQSSSYGQQS 265
P Q ++ +++ Q+
Sbjct: 1376 QPGQPTRPTATETTQT 1391
>gi|56117844 synovial sarcoma translocation, chromosome 18 isoform 2
[Homo sapiens]
Length = 387
Score = 53.1 bits (126), Expect = 4e-07
Identities = 52/198 (26%), Positives = 72/198 (36%), Gaps = 26/198 (13%)
Query: 149 SQPQSSTGGYN------QPSLGYGQSNYSYPQVPGSYPMQP-VTAPPSYPPTSYSSTQPT 201
S S GGYN Q Q S Q G+Y +P ++ P+ P +
Sbjct: 154 SSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQ 213
Query: 202 SYDQSSYSQQNTYGQPSSYGQ--QSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSS 259
Y+ Q+ GQ G Q + G +Q P PPQ G P QYS Q
Sbjct: 214 QYNMPQGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGP----PQQYSGQED 269
Query: 260 SYGQQSSF----------RQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDR 309
YG Q S +Q +P YGQ+ + GP + + G+ G+
Sbjct: 270 YYGDQYSHGGQGPPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG 329
Query: 310 GGMSRGGRGGGRGGMGLQ 327
+ G G +GG G Q
Sbjct: 330 ---QQQGYGPSQGGPGPQ 344
Score = 44.3 bits (103), Expect = 2e-04
Identities = 56/224 (25%), Positives = 75/224 (33%), Gaps = 26/224 (11%)
Query: 81 TAPQAYSQPVQGYGTGAYDTTTATVTTTQASYAAQSAYGTQPAY-PAYGQQPAATAPTRP 139
+ P + S PVQ + T + +Y + QP P QQP + P
Sbjct: 166 SVPSSQSMPVQ-------NQMTMSQGQPMGNYGPRPNMSMQPNQGPMMHQQPPSQQYNMP 218
Query: 140 QDGNKPTETSQP-QSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYS-- 196
Q G + + QP G NQ + GQ + P P Q + Y YS
Sbjct: 219 QGGGQHYQGQQPPMGMMGQVNQGNHMMGQRQIPPYRPPQQGPPQQYSGQEDYYGDQYSHG 278
Query: 197 -STQPTSYDQSSY--------SQQNTY-GQPSSYG---QQSSYGQQSSYGQQPPTSYPPQ 243
P +Q Y QQ+ Y G P G QQ Y Q Y Q P Q
Sbjct: 279 GQGPPEGMNQQYYPDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQ 338
Query: 244 TGSYSQAPSQYSQQSSSYG--QQSSFRQDHPSSMGVYGQESGGF 285
G Q P+ Q YG + + P YG + G +
Sbjct: 339 GGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQY 382
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 53.1 bits (126), Expect = 4e-07
Identities = 76/303 (25%), Positives = 103/303 (33%), Gaps = 73/303 (24%)
Query: 1 MASTDYSTYSQAAAQQGYSA-------------YTAQPTQGYAQTT-------------- 33
MA++ Y ++Q Q YSA YTAQPT G
Sbjct: 1 MATSQYFDFAQGGGPQ-YSAQPPTLPLPTVGASYTAQPTPGMDPAVNPAFPPAAPAGYGG 59
Query: 34 -QAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAYSQPVQG 92
Q + Q + YG A T ATY Q +Y SYGQ + P S +Q
Sbjct: 60 YQPHSGQDFA-YGSRPQEPVPTATTMATY-QDSY--SYGQSAAARSYEDRPYFQSAALQ- 114
Query: 93 YGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNKPTETSQPQ 152
+G + TQ + S +G+ QP AP E+ QP
Sbjct: 115 --SGRMTAADSGQPGTQEACGQPSPHGSHSH-----AQPPQQAPI--------VESGQPA 159
Query: 153 SSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQN 212
S+ S Y+YP G P + SYPP SY+ T T+Y SY +
Sbjct: 160 STLS-----------SGYTYPTATGVQPESSASIVTSYPPPSYNPT-CTAYTAPSYPNYD 207
Query: 213 TYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHP 272
S Y S + PP PP G Q P + S ++ + P
Sbjct: 208 A----SVYSAASPF--------YPPAQPPPPPGPPQQLPPPPAPAGSGSSPRADSKPPLP 255
Query: 273 SSM 275
S +
Sbjct: 256 SKL 258
>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
isoform d [Homo sapiens]
Length = 756
Score = 53.1 bits (126), Expect = 4e-07
Identities = 50/163 (30%), Positives = 63/163 (38%), Gaps = 13/163 (7%)
Query: 129 QQPAATAPTRPQDGNKPTETSQPQSSTGGYNQPSLGYGQSNYSY-PQVPGSYPMQPVTAP 187
QQP P PQ P + P S + N P G S Y+ +PGS
Sbjct: 594 QQPPPQQPPPPQP--PPQQPPPPPSYSPARNPP----GASTYNKNSNIPGSSANTSTPTV 647
Query: 188 PSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQS-SYGQQSSYGQQPPTSYPPQTGS 246
SY P S +QP Y+Q YSQ T P + +YG Y P T PP T
Sbjct: 648 SSYSPPQPSYSQPP-YNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQ 706
Query: 247 YSQAPS--QYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSG 287
PS QY Q + + Q + P G Y + G +SG
Sbjct: 707 TYPQPSYNQYQQYAQQWNQYYQNQGQWPPYYGNY--DYGSYSG 747
Score = 51.2 bits (121), Expect = 1e-06
Identities = 38/129 (29%), Positives = 51/129 (39%), Gaps = 6/129 (4%)
Query: 122 PAYPAYGQQPAATAPTRPQDGNKPTETSQPQSST-GGYNQPSLGYGQSNYSYPQVPGSY- 179
P+Y P A+ T ++ N P ++ + T Y+ P Y Q Y+ Y
Sbjct: 615 PSYSPARNPPGAS--TYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGGYSQGYT 672
Query: 180 -PMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPT 238
P P PP+Y SY P Y TY QP SY Q Y QQ + Q
Sbjct: 673 APPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQP-SYNQYQQYAQQWNQYYQNQG 731
Query: 239 SYPPQTGSY 247
+PP G+Y
Sbjct: 732 QWPPYYGNY 740
Score = 41.2 bits (95), Expect = 0.001
Identities = 37/133 (27%), Positives = 48/133 (36%), Gaps = 3/133 (2%)
Query: 152 QSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSTQPTSYDQSSYSQQ 211
+S GGY+Q G + + GSY P PP P SYS
Sbjct: 561 RSGGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPPSYSPA 620
Query: 212 NTYGQPSSYGQQSSYGQQSSYGQQPP-TSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQD 270
S+Y + S+ S+ P +SY P SYSQ P Y+Q S G +
Sbjct: 621 RNPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPP--YNQGGYSQGYTAPPPPP 678
Query: 271 HPSSMGVYGQESG 283
P YG G
Sbjct: 679 PPPPAYNYGSYGG 691
Score = 37.0 bits (84), Expect = 0.027
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Query: 253 QYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGM 312
QY+++ G R D+ G G+ GG ENR GP G RGGF G
Sbjct: 493 QYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENR---GPP--GGNRGGFQNRGG 547
Query: 313 SRGGRGGGRGG 323
GG G RGG
Sbjct: 548 GSGGGGNYRGG 558
Score = 32.3 bits (72), Expect = 0.66
Identities = 31/102 (30%), Positives = 38/102 (37%), Gaps = 8/102 (7%)
Query: 9 YSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYAT 68
Y+Q QGY+A P AY SYG Y P + T TY Q +Y
Sbjct: 662 YNQGGYSQGYTAPPPPP-----PPPPAYNYGSYGGY-NPAPYTPPPPPTAQTYPQPSY-N 714
Query: 69 SYGQPPTGYTTPTAPQAYSQPVQG-YGTGAYDTTTATVTTTQ 109
Y Q + Q P G Y G+Y T T+TQ
Sbjct: 715 QYQQYAQQWNQYYQNQGQWPPYYGNYDYGSYSGNTQGGTSTQ 756
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.304 0.121 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,712,411
Number of Sequences: 37866
Number of extensions: 952382
Number of successful extensions: 9954
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 919
Number of HSP's that attempted gapping in prelim test: 4997
Number of HSP's gapped (non-prelim): 3330
length of query: 354
length of database: 18,247,518
effective HSP length: 103
effective length of query: 251
effective length of database: 14,347,320
effective search space: 3601177320
effective search space used: 3601177320
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.