Guide to the Human Genome
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Name: BAG4 Sequence: fasta or formatted (457aa) NCBI GI: 6631075
Description:

BCL2-associated athanogene 4

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         23           1
 C cysteine            0.9          4           1
 D aspartate           3.9         18           2
 E glutamate           6.1         28           2
 F phenylalanine       0.4          2           1
 G glycine            10.5         48           4
 H histidine           1.5          7           1
 I isoleucine          1.5          7           2
 K lysine              2.8         13           2
 L leucine             5.3         24           2
 M methionine          1.3          6           1
 N asparagine          3.7         17           2
 P proline            14.7         67           4
 Q glutamine           6.3         29           2
 R arginine            4.2         19           2
 S serine             12.5         57           3
 T threonine           5.0         23           2
 V valine              4.6         21           1
 W tryptophan          2.0          9           1
 Y tyrosine            7.7         35           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BCL2-associated athanogene 4 
BAG3                  0.082   BCL2-associated athanogene 3 
PRB1                  0.043   proline-rich protein BstNI subfamily 1 isoform 1 pre...
BAG5                  0.042   BCL2-associated athanogene 5 isoform a 
BAG5                  0.042   BCL2-associated athanogene 5 isoform b 
BAG5                  0.042   BCL2-associated athanogene 5 isoform b 
POLR2A                0.039   DNA-directed RNA polymerase II A 
PRB2                  0.039   proline-rich protein BstNI subfamily 2 
WIPF1                 0.034   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.034   WAS/WASL interacting protein family, member 1 
PRB4                  0.034   proline-rich protein BstNI subfamily 4 precursor [Ho...
EWSR1                 0.031   Ewing sarcoma breakpoint region 1 isoform 1 
SMARCA4               0.031   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.031   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.031   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.031   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.031   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.031   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.031   SWI/SNF-related matrix-associated actin-dependent re...
PRB3                  0.031   proline-rich protein BstNI subfamily 3 precursor [H...
EWSR1                 0.031   Ewing sarcoma breakpoint region 1 isoform 5 
EWSR1                 0.031   Ewing sarcoma breakpoint region 1 isoform 3 
EWSR1                 0.031   Ewing sarcoma breakpoint region 1 isoform 2 
ARID1A                0.030   AT rich interactive domain 1A isoform a 
ATN1                  0.028   atrophin-1 
ATN1                  0.028   atrophin-1 
SFRS15                0.027   splicing factor, arginine/serine-rich 15 isoform 3 ...
ARID1B                0.027   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.027   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
SF1                   0.026   splicing factor 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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