Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 25188181
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|25188181 WAP four-disulfide core domain 13 precursor [Homo
sapiens]
(93 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|25188181 WAP four-disulfide core domain 13 precursor [Homo sa... 200 2e-52
gi|21703706 WAP four-disulfide core domain 10A precursor [Homo s... 45 1e-05
gi|26006869 WAP four-disulfide core domain 10B isoform a precurs... 40 5e-04
gi|16751923 WAP, follistatin/kazal, immunoglobulin, kunitz and n... 39 0.001
gi|56699495 WAP four-disulfide core domain 2 precursor [Homo sap... 37 0.003
gi|26006867 WAP four-disulfide core domain 10B isoform b [Homo s... 37 0.004
gi|32307109 WAP four-disulfide core domain 3 precursor [Homo sap... 35 0.013
gi|22218355 WAP four-disulfide core domain 11 precursor [Homo sa... 33 0.038
gi|116256475 zinc finger protein 827 [Homo sapiens] 33 0.065
gi|153946389 WAP four-disulfide core domain 8 precursor [Homo sa... 30 0.32
gi|153946387 WAP four-disulfide core domain 8 precursor [Homo sa... 30 0.32
gi|148539593 sushi domain containing 4 isoform a [Homo sapiens] 30 0.55
gi|21717822 WAP four-disulfide core domain 5 precursor [Homo sap... 30 0.55
gi|4507065 secretory leukocyte peptidase inhibitor precursor [Ho... 29 0.71
gi|28212222 WFIKKN2 protein [Homo sapiens] 29 0.71
gi|38490571 keratin associated protein 10-7 [Homo sapiens] 29 0.71
gi|119395746 Kallmann syndrome 1 protein precursor [Homo sapiens] 29 0.93
gi|239752100 PREDICTED: hypothetical protein [Homo sapiens] 28 1.2
gi|239746604 PREDICTED: similar to Keratin-associated protein 10... 28 1.2
gi|238859649 keratin associated protein 10-8 [Homo sapiens] 28 1.6
gi|183396797 keratin associated protein KRTAP2.1A [Homo sapiens] 28 1.6
gi|15082232 keratin associated protein 2-4 [Homo sapiens] 28 1.6
gi|225690576 keratin associated protein 2-2 [Homo sapiens] 28 1.6
gi|113427417 PREDICTED: similar to keratin associated protein 2-... 28 1.6
gi|18379353 WAP four-disulfide core domain 1 precursor [Homo sap... 28 2.1
gi|153946395 tenascin C precursor [Homo sapiens] 27 2.7
gi|41327754 ankyrin repeat domain 3 [Homo sapiens] 27 2.7
gi|63053515 keratin associated protein 10-3 [Homo sapiens] 27 2.7
gi|23397498 transmembrane protein 92 [Homo sapiens] 27 2.7
gi|61744435 phosphodiesterase 5A isoform 1 [Homo sapiens] 27 3.5
>gi|25188181 WAP four-disulfide core domain 13 precursor [Homo
sapiens]
Length = 93
Score = 200 bits (509), Expect = 2e-52
Identities = 93/93 (100%), Positives = 93/93 (100%)
Query: 1 MKPVLPLQFLVVFCLALQLVPGSPKQRVLKYILEPPPCISAPENCTHLCTMQEDCEKGFQ 60
MKPVLPLQFLVVFCLALQLVPGSPKQRVLKYILEPPPCISAPENCTHLCTMQEDCEKGFQ
Sbjct: 1 MKPVLPLQFLVVFCLALQLVPGSPKQRVLKYILEPPPCISAPENCTHLCTMQEDCEKGFQ 60
Query: 61 CCSSFCGIVCSSETFQKRNRIKHKGSEVIMPAN 93
CCSSFCGIVCSSETFQKRNRIKHKGSEVIMPAN
Sbjct: 61 CCSSFCGIVCSSETFQKRNRIKHKGSEVIMPAN 93
>gi|21703706 WAP four-disulfide core domain 10A precursor [Homo
sapiens]
Length = 79
Score = 45.1 bits (105), Expect = 1e-05
Identities = 30/77 (38%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 1 MKPVLPLQFLVVFCLALQLVPG-SPKQRVLKYILEPP--PCISAPEN--CTHLCTMQEDC 55
M P L LV+ L LQ G K+R+ K L P C P+ C HLC DC
Sbjct: 1 MAPQTLLPVLVLCVLLLQAQGGYRDKKRMQKTQLSPEIKVCQQQPKLYLCKHLCESHRDC 60
Query: 56 EKGFQCCSSFCGIVCSS 72
+ CCS++CG VC S
Sbjct: 61 QANNICCSTYCGNVCMS 77
>gi|26006869 WAP four-disulfide core domain 10B isoform a
precursor [Homo sapiens]
Length = 73
Score = 39.7 bits (91), Expect = 5e-04
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 1 MKPVLPLQFLVVFCLALQLVPG-SPKQRVLKY-ILEPPPCISAPENCTHLCTMQEDCEKG 58
M P L LV+ L LQ G K R+ + + E P I C H C+ + CE
Sbjct: 1 MAPQTLLLVLVLCVLLLQAQGGYRDKMRMQRIKVCEKRPSIDL---CIHHCSYFQKCETN 57
Query: 59 FQCCSSFCGIVCSS 72
CCS+FCG +C S
Sbjct: 58 KICCSAFCGNICMS 71
>gi|16751923 WAP, follistatin/kazal, immunoglobulin, kunitz and
netrin domain containing 1 precursor [Homo sapiens]
Length = 548
Score = 38.9 bits (89), Expect = 0.001
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Query: 1 MKPVLPLQFLVVFCLALQLVPG-SPKQRVLKYILEPPPCISAPENCTHLCTMQEDCEKGF 59
++P+LPL L+ L+PG V L P + A C C+ +DC
Sbjct: 4 LRPLLPLLLLLRLTSGAGLLPGLGSHPGVCPNQLSPNLWVDAQSTCERECSRDQDCAAAE 63
Query: 60 QCCSSFCGI 68
+CC + CG+
Sbjct: 64 KCCINVCGL 72
>gi|56699495 WAP four-disulfide core domain 2 precursor [Homo
sapiens]
Length = 124
Score = 37.4 bits (85), Expect = 0.003
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 37 PCISAPENCTHLCTMQEDCEKGFQCCSSFCGIVCS 71
P + A +NCT C +C +CCS+ C CS
Sbjct: 37 PELQADQNCTQECVSDSECADNLKCCSAGCATFCS 71
>gi|26006867 WAP four-disulfide core domain 10B isoform b [Homo
sapiens]
Length = 89
Score = 36.6 bits (83), Expect = 0.004
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 45 CTHLCTMQEDCEKGFQCCSSFCGIVCSS 72
C H C+ + CE CCS+FCG +C S
Sbjct: 60 CIHHCSYFQKCETNKICCSAFCGNICMS 87
>gi|32307109 WAP four-disulfide core domain 3 precursor [Homo
sapiens]
Length = 231
Score = 35.0 bits (79), Expect = 0.013
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 38 CISAPENCTHLCTMQEDCEKGFQCCSSFCGIVC 70
C + P C LC C +G +CCS+ CG C
Sbjct: 126 CPADPLPCEELCDGDASCPQGHKCCSTGCGRTC 158
Score = 33.1 bits (74), Expect = 0.049
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 45 CTHLCTMQEDCEKGFQCCSSFCGIVC 70
C C M E+C+ G +CC S CG C
Sbjct: 178 CIVGCVMDENCQAGEKCCKSGCGRFC 203
Score = 28.5 bits (62), Expect = 1.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 45 CTHLCTMQEDCEKGFQCCSSFCGIVC 70
C LC E C +CC++ CG +C
Sbjct: 40 CKELCQGDELCPAEQKCCTTGCGRIC 65
>gi|22218355 WAP four-disulfide core domain 11 precursor [Homo
sapiens]
Length = 87
Score = 33.5 bits (75), Expect = 0.038
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 1 MKPVLPLQFLVVFCLALQLVPGSP-KQRVLKYILEPPPCISAP--ENCTHLCTMQEDC-E 56
MK +P+ + FC L V G K+R + L C P + CT+ C+ C +
Sbjct: 5 MKLWIPM-LMTFFCTVLLSVLGEMRKKRYDRKELLLEECWGKPNVKECTNKCSKAFRCKD 63
Query: 57 KGFQCCSSFCGIVC 70
K + CC ++CG +C
Sbjct: 64 KNYTCCWTYCGNIC 77
>gi|116256475 zinc finger protein 827 [Homo sapiens]
Length = 1077
Score = 32.7 bits (73), Expect = 0.065
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Query: 21 PGSPKQRVLKYILEPPPC--ISAPENCTHLCTMQEDCEKGFQCCSSFCGIVCSSETFQKR 78
P P + L+ +L P P +S P N +E+ K FQC CG+V +++ KR
Sbjct: 338 PPPPPPQSLELLLLPVPKGRVSKPSNSAS----EEESGKPFQC--PICGLVIKRKSYWKR 391
Query: 79 NRIKHKG 85
+ + H G
Sbjct: 392 HMVIHTG 398
>gi|153946389 WAP four-disulfide core domain 8 precursor [Homo
sapiens]
Length = 241
Score = 30.4 bits (67), Expect = 0.32
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 43 ENCTHLCTMQEDCEKGFQCCSSFCGIVCS 71
+ C C DC + +CC S CG VC+
Sbjct: 163 KECPPSCHSDIDCPQTDKCCESRCGFVCA 191
>gi|153946387 WAP four-disulfide core domain 8 precursor [Homo
sapiens]
Length = 241
Score = 30.4 bits (67), Expect = 0.32
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 43 ENCTHLCTMQEDCEKGFQCCSSFCGIVCS 71
+ C C DC + +CC S CG VC+
Sbjct: 163 KECPPSCHSDIDCPQTDKCCESRCGFVCA 191
>gi|148539593 sushi domain containing 4 isoform a [Homo sapiens]
Length = 490
Score = 29.6 bits (65), Expect = 0.55
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 14 CLALQLVPGSPKQRVLKYILEPPPCISAPENCTHLCTMQEDCEKGFQCCSSFCGIVC 70
CLAL++ P P ++ P PC E H ++ C+ G+ S + I C
Sbjct: 237 CLALEVCPLPPMVSHGDFVCHPRPC----ERYNHGTVVEFYCDPGYSLTSDYKYITC 289
>gi|21717822 WAP four-disulfide core domain 5 precursor [Homo
sapiens]
Length = 123
Score = 29.6 bits (65), Expect = 0.55
Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 38 CISAPENCTHLCTMQEDCEKGFQCCSSFCGIVC 70
C+S P N HLC DC +CC S CG C
Sbjct: 88 CLS-PMN--HLCHKDSDCSGKKRCCHSACGRDC 117
>gi|4507065 secretory leukocyte peptidase inhibitor precursor [Homo
sapiens]
Length = 132
Score = 29.3 bits (64), Expect = 0.71
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 44 NCTHLCTMQEDCEKGFQCCSSFCGIVCSS 72
N + C M C++ +CC CG C S
Sbjct: 100 NPPNFCEMDGQCKRDLKCCMGMCGKSCVS 128
>gi|28212222 WFIKKN2 protein [Homo sapiens]
Length = 576
Score = 29.3 bits (64), Expect = 0.71
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 33 LEPPPCISAPENCTHLCTMQEDCEKGFQCCSSFCG 67
+ P + A C C ++CE +CC + CG
Sbjct: 50 MNPNLWVDAQSTCRRECETDQECETYEKCCPNVCG 84
>gi|38490571 keratin associated protein 10-7 [Homo sapiens]
Length = 370
Score = 29.3 bits (64), Expect = 0.71
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 21 PGSPKQRVLKYILEPPPCISAPENCTHLCTMQEDCEKGFQCCSSFCGIVCS 71
P S + + + P C+ P C + Q C + C S C CS
Sbjct: 305 PSSSVSLLCRPVCRPACCVPVPSCCAPTSSCQASCCRPASCVSLLCRPACS 355
>gi|119395746 Kallmann syndrome 1 protein precursor [Homo sapiens]
Length = 680
Score = 28.9 bits (63), Expect = 0.93
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 10/51 (19%)
Query: 29 LKYIL--EPPPCISAPEN-------CTHLCTMQEDCEKGFQCCSSFCGIVC 70
LKYIL + C APE C C + +C +CCS+ CG C
Sbjct: 123 LKYILLVKQGDC-PAPEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTC 172
>gi|239752100 PREDICTED: hypothetical protein [Homo sapiens]
Length = 312
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 37 PCISA---PENCTHLCTMQEDCEKGFQCCSS 64
PC A P +CT LC Q C+ CC+S
Sbjct: 178 PCCQAACEPSSCTPLCCQQSSCQPA--CCTS 206
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/51 (27%), Positives = 18/51 (35%)
Query: 21 PGSPKQRVLKYILEPPPCISAPENCTHLCTMQEDCEKGFQCCSSFCGIVCS 71
P S + + P C+ P C + Q C C S C VCS
Sbjct: 258 PSSSVSLLCHPVCRPTCCMPVPSCCAPAFSCQPSCCHPASCVSLLCRPVCS 308
>gi|239746604 PREDICTED: similar to Keratin-associated protein 10-8
[Homo sapiens]
Length = 312
Score = 28.5 bits (62), Expect = 1.2
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 5/31 (16%)
Query: 37 PCISA---PENCTHLCTMQEDCEKGFQCCSS 64
PC A P +CT LC Q C+ CC+S
Sbjct: 178 PCCQAACEPSSCTPLCCQQSSCQPA--CCTS 206
Score = 27.3 bits (59), Expect = 2.7
Identities = 14/51 (27%), Positives = 18/51 (35%)
Query: 21 PGSPKQRVLKYILEPPPCISAPENCTHLCTMQEDCEKGFQCCSSFCGIVCS 71
P S + + P C+ P C + Q C C S C VCS
Sbjct: 258 PSSSVSLLCHPVCRPTCCMPVPSCCAPAFSCQPSCCHPASCVSLLCRRVCS 308
>gi|238859649 keratin associated protein 10-8 [Homo sapiens]
Length = 259
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/51 (25%), Positives = 18/51 (35%)
Query: 21 PGSPKQRVLKYILEPPPCISAPENCTHLCTMQEDCEKGFQCCSSFCGIVCS 71
P S + + + P C+ P C + Q C C S C CS
Sbjct: 205 PSSSVSLLCRPVCRPACCVPVPSCCVPASSCQPSCCHPASCLSFLCRPACS 255
>gi|183396797 keratin associated protein KRTAP2.1A [Homo sapiens]
Length = 128
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 45 CTHLCTMQEDCEKGFQCCSSFC-GIVC 70
C C++QE C + CC S C +VC
Sbjct: 63 CCDPCSLQEGCCRPITCCPSSCTAVVC 89
>gi|15082232 keratin associated protein 2-4 [Homo sapiens]
Length = 128
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 45 CTHLCTMQEDCEKGFQCCSSFC-GIVC 70
C C++QE C + CC S C +VC
Sbjct: 63 CCDPCSLQEGCCRPITCCPSSCTAVVC 89
>gi|225690576 keratin associated protein 2-2 [Homo sapiens]
Length = 123
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 45 CTHLCTMQEDCEKGFQCCSSFC-GIVC 70
C C++QE C + CC S C +VC
Sbjct: 63 CCDPCSLQEGCCRPITCCPSSCTAVVC 89
>gi|113427417 PREDICTED: similar to keratin associated protein 2-4
[Homo sapiens]
Length = 128
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 45 CTHLCTMQEDCEKGFQCCSSFC-GIVC 70
C C++QE C + CC S C +VC
Sbjct: 63 CCDPCSLQEGCCRPITCCPSSCTAVVC 89
>gi|18379353 WAP four-disulfide core domain 1 precursor [Homo
sapiens]
Length = 220
Score = 27.7 bits (60), Expect = 2.1
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 21 PGSPKQRVLKYILEPPPCISAPENCTHL-CTMQEDCEKGFQCCSSFCGIVC 70
PG P+Q PPP P C C +C + +CC + C C
Sbjct: 55 PGGPRQPRADRC-PPPPRTLPPGACQAARCQADSECPRHRRCCYNGCAYAC 104
>gi|153946395 tenascin C precursor [Homo sapiens]
Length = 2201
Score = 27.3 bits (59), Expect = 2.7
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 45 CTHLCTMQEDCEKG-FQCCSSFCGIVCSSE 73
C H C Q CE+G C F G+ CS +
Sbjct: 346 CPHACHTQGRCEEGQCVCDEGFAGVDCSEK 375
>gi|41327754 ankyrin repeat domain 3 [Homo sapiens]
Length = 784
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 10 LVVFCLALQLVPGSPKQRVLKYILE---------PPPCISAPENCTHLCTMQEDCEKG 58
+V++ + Q P + ++ +L +++ PP C + P C+HL + + C +G
Sbjct: 211 IVIWGVLTQKKPFADEKNILHIMVKVVKGHRPELPPVCRARPRACSHLIRLMQRCWQG 268
>gi|63053515 keratin associated protein 10-3 [Homo sapiens]
Length = 221
Score = 27.3 bits (59), Expect = 2.7
Identities = 13/51 (25%), Positives = 18/51 (35%)
Query: 21 PGSPKQRVLKYILEPPPCISAPENCTHLCTMQEDCEKGFQCCSSFCGIVCS 71
P S + + + C+ P C T Q C + C S C CS
Sbjct: 154 PSSSVSLLCRPVCRSTCCVPIPSCCAPASTCQPSCCRPASCVSLLCRPTCS 204
>gi|23397498 transmembrane protein 92 [Homo sapiens]
Length = 159
Score = 27.3 bits (59), Expect = 2.7
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 39 ISAPENCTHLCTMQEDCEKGFQCCSSFC 66
++ P+ C + C KGF+CC C
Sbjct: 18 LAGPQKIAAKCGLILACPKGFKCCGDSC 45
>gi|61744435 phosphodiesterase 5A isoform 1 [Homo sapiens]
Length = 875
Score = 26.9 bits (58), Expect = 3.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 50 TMQEDCEKGFQCCSSFCGIVCSSETFQKRNRIKHKGSEVIM 90
T E EK F +FCGIV + + + +++K ++V++
Sbjct: 294 TFTEKDEKDFAAYLAFCGIVLHNAQLYETSLLENKRNQVLL 334
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.139 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,726,350
Number of Sequences: 37866
Number of extensions: 231573
Number of successful extensions: 853
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 785
Number of HSP's gapped (non-prelim): 93
length of query: 93
length of database: 18,247,518
effective HSP length: 64
effective length of query: 29
effective length of database: 15,824,094
effective search space: 458898726
effective search space used: 458898726
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.