Guide to the Human Genome
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Name: WFDC11 Sequence: fasta or formatted (87aa) NCBI GI: 22218355
Description:

WAP four-disulfide core domain 11 precursor

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.1          1           1
 C cysteine           10.3          9           2
 D aspartate           3.4          3           1
 E glutamate           6.9          6           2
 F phenylalanine       3.4          3           2
 G glycine             4.6          4           1
 H histidine           0.0          0           0
 I isoleucine          3.4          3           1
 K lysine             11.5         10           2
 L leucine            10.3          9           3
 M methionine          5.7          5           1
 N asparagine          5.7          5           1
 P proline             2.3          2           1
 Q glutamine           0.0          0           0
 R arginine            4.6          4           1
 S serine              4.6          4           1
 T threonine           6.9          6           1
 V valine              5.7          5           1
 W tryptophan          4.6          4           1
 Y tyrosine            4.6          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WAP four-disulfide core domain 11 precursor 
WFDC9                 0.256   protease inhibitor WAP9 
WFDC10A               0.110   WAP four-disulfide core domain 10A precursor 
WFDC10B               0.105   WAP four-disulfide core domain 10B isoform a precurs...
WFDC10B               0.070   WAP four-disulfide core domain 10B isoform b 
WFDC13                0.047   WAP four-disulfide core domain 13 precursor 
LANCL1                0.023   lanthionine synthetase C-like protein 1 
LANCL1                0.023   lanthionine synthetase C-like protein 1 
LANCL1                0.023   lanthionine synthetase C-like protein 1 
ADAMDEC1              0.023   ADAM-like, decysin 1 isoform 1 
ADAMDEC1              0.023   ADAM-like, decysin 1 isoform 2 
ADAMDEC1              0.023   ADAM-like, decysin 1 isoform 2 
TNXB                  0.017   tenascin XB isoform 1 precursor 
ZNF728                0.017   PREDICTED: zinc finger protein 728 
ZNF728                0.017   PREDICTED: zinc finger protein 728 
ZNF728                0.017   PREDICTED: zinc finger protein 728 
ADAM7                 0.017   a disintegrin and metalloproteinase domain 7 
LOC100287163          0.012   PREDICTED: hypothetical protein XP_002343923 
ZNF717                0.012   zinc finger protein 717 
FBN2                  0.012   fibrillin 2 precursor 
ODZ3                  0.012   odz, odd Oz/ten-m homolog 3 
ODZ1                  0.006   odz, odd Oz/ten-m homolog 1 isoform 3 
ODZ1                  0.006   odz, odd Oz/ten-m homolog 1 isoform 2 
ODZ1                  0.006   odz, odd Oz/ten-m homolog 1 isoform 1 
EYS                   0.006   eyes shut homolog isoform 1 
MACF1                 0.006   microfilament and actin filament cross-linker protei...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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