Guide to the Human Genome
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Name: TMEM92 Sequence: fasta or formatted (159aa) NCBI GI: 23397498
Description:

transmembrane protein 92

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7          9           2
 C cysteine            7.5         12           2
 D aspartate           3.1          5           1
 E glutamate           6.3         10           2
 F phenylalanine       5.7          9           1
 G glycine             6.9         11           1
 H histidine           0.0          0           0
 I isoleucine          6.9         11           2
 K lysine              3.8          6           1
 L leucine            10.1         16           2
 M methionine          0.6          1           1
 N asparagine          1.9          3           1
 P proline            16.4         26           4
 Q glutamine           2.5          4           1
 R arginine            5.0          8           1
 S serine              6.3         10           1
 T threonine           3.1          5           1
 V valine              5.7          9           1
 W tryptophan          0.6          1           1
 Y tyrosine            1.9          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 92 
USP51                 0.044   ubiquitin specific protease 51 
SPEG                  0.038   SPEG complex locus 
TTN                   0.035   titin isoform N2-A 
SHISA5                0.035   scotin 
FLJ22184              0.031   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.031   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.031   PREDICTED: hypothetical protein LOC80164 
YLPM1                 0.031   YLP motif containing 1 
FMNL3                 0.031   formin-like 3 isoform 2 
FMNL3                 0.031   formin-like 3 isoform 1 
FMN1                  0.028   formin 1 
CSPP1                 0.028   centrosome spindle pole associated protein 1 isofor...
JSRP1                 0.028   junctional sarcoplasmic reticulum protein 1 
CSPP1                 0.028   centrosome spindle pole associated protein 1 isofor...
C4orf48               0.028   hypothetical protein LOC401115 
WIPF1                 0.028   WAS/WASL interacting protein family, member 1 [Homo...
WIPF1                 0.028   WAS/WASL interacting protein family, member 1 
MLL2                  0.028   myeloid/lymphoid or mixed-lineage leukemia 2 
PRR12                 0.028   proline rich 12 
RAX                   0.025   retina and anterior neural fold homeobox 
WIPF3                 0.025   WAS/WASL interacting protein family, member 3 [Homo...
ZIC5                  0.025   zinc finger protein of the cerebellum 5 
SMR3B                 0.025   submaxillary gland androgen regulated protein 3 homol...
NCOR2                 0.025   nuclear receptor co-repressor 2 isoform 2 
ABI2                  0.025   abl interactor 2 
MAGEE1                0.025   melanoma antigen family E, 1 
ZFHX4                 0.025   zinc finger homeodomain 4 
WASL                  0.022   Wiskott-Aldrich syndrome gene-like protein 
ABL2                  0.022   arg tyrosine kinase isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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