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Search of human proteins with 24762236
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing A [Homo sapiens]
(312 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain c... 635 0.0
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 87 2e-17
gi|52426743 cisplatin resistance-associated overexpressed protei... 82 5e-16
gi|19923485 cisplatin resistance-associated overexpressed protei... 82 5e-16
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 70 2e-12
gi|116812577 LUC7-like 2 [Homo sapiens] 70 3e-12
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 68 1e-11
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 68 1e-11
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 67 2e-11
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 67 2e-11
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 67 3e-11
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 66 3e-11
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 66 3e-11
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 66 3e-11
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 65 1e-10
gi|41393554 LUC7-like isoform b [Homo sapiens] 64 1e-10
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 64 2e-10
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 64 2e-10
gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Ho... 63 4e-10
gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens] 63 4e-10
gi|8922297 LUC7-like isoform a [Homo sapiens] 62 7e-10
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 62 7e-10
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 62 7e-10
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 62 7e-10
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 62 9e-10
gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens] 61 1e-09
gi|35493811 RNA binding motif protein 39 isoform a [Homo sapiens] 61 1e-09
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 61 1e-09
gi|122937227 U2-associated SR140 protein [Homo sapiens] 61 1e-09
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] 60 2e-09
>gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing A [Homo sapiens]
Length = 312
Score = 635 bits (1638), Expect = 0.0
Identities = 312/312 (100%), Positives = 312/312 (100%)
Query: 1 MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
Sbjct: 1 MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV 60
Query: 61 YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
Sbjct: 61 YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL 120
Query: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
Sbjct: 121 EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR 180
Query: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR 240
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
Sbjct: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR 240
Query: 241 RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS 300
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS
Sbjct: 241 RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS 300
Query: 301 KKSHKKSRRGNE 312
KKSHKKSRRGNE
Sbjct: 301 KKSHKKSRRGNE 312
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 86.7 bits (213), Expect = 2e-17
Identities = 95/334 (28%), Positives = 134/334 (40%), Gaps = 62/334 (18%)
Query: 24 IIRTRIYESKYWKEECFGL-TAELVVDK------------------AMELRFVGGVYG-- 62
+I T I S Y+K + + L T VVD+ A + GGV G
Sbjct: 61 MILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRGVG 120
Query: 63 -GNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYLE 121
G I T F CL K+ ++ + ++ I + D Y+R LG +Y+R T D + + E
Sbjct: 121 TGGIVSTAF-CLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWFE 179
Query: 122 PLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPRV 181
+D + + G +M + E + L + PR+ +Q++ R
Sbjct: 180 SFLDDEEDLDVKAGGGC--VMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRP 237
Query: 182 SALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR 241
+++D E EE D +ER R RS R PRRSP RRSRSRS R
Sbjct: 238 RKIKKD-----GKEGAEEIDRHVER-----RRSRSPRRSLSPRRSP----RRSRSRSHHR 283
Query: 242 R--------------------SRSPKRRSPSPRRERHRSKSPRRHRSRSRDR-RHRSRSK 280
R K R RR R + R RSRSR+R R RSRS+
Sbjct: 284 EGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSR 343
Query: 281 SPGHHRSHRHRSHSKSPERSKKSHK--KSRRGNE 312
R R R K ER ++ + RGNE
Sbjct: 344 DRKGDRRDRDREREKENERGRRRDRDYDKERGNE 377
Score = 67.4 bits (163), Expect = 2e-11
Identities = 50/129 (38%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 198 EEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYR-RSRSRSPRRRSRSP---KRRSPSP 253
+ D ER + RR RD DK R + + R RSR RS +RSR K+
Sbjct: 348 DRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDK 407
Query: 254 RRERHR-----SKSPRRH-RSRSRDRRHRSRSKSPGHHRSHRHRSHSKSP----ERSKKS 303
RHR SK ++H RSRSR+R+HRSRS+S + R RS KS E +KS
Sbjct: 408 DDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKS 467
Query: 304 HKKSRRGNE 312
+K+SR G++
Sbjct: 468 NKRSRSGSQ 476
Score = 58.9 bits (141), Expect = 6e-09
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 192 ESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP 251
E S+E+ E E+ D R +RD DK ++ RSRSR + RSRS R +
Sbjct: 387 ERSKEQRSRGEVEEKKHKEDKDDRRHRD-DKRDSKKEKKHSRSRSRERKHRSRSRSRNAG 445
Query: 252 SPRRERHRSKSPRRHRSRSRDRRH-RSRSKSPGHHRS---HRHRSHSKSPERSKKSHKKS 307
R R + KS +H++ S+++ + RSRS S G S + R HS S E+S+K +
Sbjct: 446 KRSRSRSKEKS-SKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSK 504
Query: 308 RRGNE 312
R ++
Sbjct: 505 ERSHK 509
Score = 54.7 bits (130), Expect = 1e-07
Identities = 50/166 (30%), Positives = 73/166 (43%), Gaps = 37/166 (22%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPR-RSPTLR 230
+E E+ R S + +VE + +E++D++ R D +R S ++ R RS +
Sbjct: 380 KERERSRER-SKEQRSRGEVEEKKHKEDKDDRRHR----DDKRDSKKEKKHSRSRSRERK 434
Query: 231 YR-RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR---------------- 273
+R RSRSR+ +RSRS + S + + KS +R RS S+ R
Sbjct: 435 HRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSK 494
Query: 274 ---RHRSRSKSPGHHRSH-----------RHRSHSKSPERSKKSHK 305
R RSRSK H R H R RS S E +K HK
Sbjct: 495 EKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHK 540
Score = 33.1 bits (74), Expect = 0.33
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 36/144 (25%)
Query: 185 EEDMDDVESSEEEEEEDEKLERVPSPDH-RRRSYRDLDKPRRSPTLRYRRSRSRSPR--- 240
+ED DD +++ D K E+ S R R +R + R + RS+ +S +
Sbjct: 404 KEDKDD--RRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKN 461
Query: 241 -------RRSRS-----------PKRRSPSPRRERHRSKSPRRHRSRS------------ 270
+RSRS K+R SP +E+ R +S + RS
Sbjct: 462 ESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDK 521
Query: 271 RDRRHRSRSKSPGHHRSHRHRSHS 294
DRR + + H+++ +
Sbjct: 522 HDRRRSQSIEQESQEKQHKNKDET 545
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 82.4 bits (202), Expect = 5e-16
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 18/148 (12%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSY-------RDLDKPR 224
+E ++ E R E + ++ E EEE+ + ER + R+RS R D+ R
Sbjct: 249 KEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDR-R 307
Query: 225 RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGH 284
S + ++RSRSR RRRSRS R RR R +S R+HRSRSRDRR RS+S+
Sbjct: 308 CSRSRDHKRSRSRE-RRRSRSRDR-----RRSRSHDRSERKHRSRSRDRR-RSKSRD--- 357
Query: 285 HRSHRHRSHSKSPERSKKSHKKSRRGNE 312
+S++HRS S+ E+ +KS +K +RG++
Sbjct: 358 RKSYKHRSKSRDREQDRKSKEKEKRGSD 385
Score = 63.9 bits (154), Expect = 2e-10
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 182 SALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR 241
+ +EE + + EE + DE+L++ R R+ ++ R + RR +
Sbjct: 225 ATVEELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERER--KRRREEEEREKE 282
Query: 242 RSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSK 301
R+R +RR S R RH S++ R SRSRD + RSRS+ RS R R S+S +RS+
Sbjct: 283 RARDRERRKRSRSRSRHSSRTSDRRCSRSRDHK-RSRSRERRRSRS-RDRRRSRSHDRSE 340
Query: 302 KSHKKSRR 309
+ H+ R
Sbjct: 341 RKHRSRSR 348
Score = 33.9 bits (76), Expect = 0.19
Identities = 32/149 (21%), Positives = 46/149 (30%), Gaps = 29/149 (19%)
Query: 164 RLQKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKP 223
R + R + + R + D S E R S D R +R +
Sbjct: 290 RKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRD 349
Query: 224 RRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPG 283
RR R + R + +HRS+SRDR +SK
Sbjct: 350 RR-----------------------------RSKSRDRKSYKHRSKSRDREQDRKSKEKE 380
Query: 284 HHRSHRHRSHSKSPERSKKSHKKSRRGNE 312
S +S KS R K+S + E
Sbjct: 381 KRGSDDKKSSVKSGSREKQSEDTNTESKE 409
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 82.4 bits (202), Expect = 5e-16
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 18/148 (12%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSY-------RDLDKPR 224
+E ++ E R E + ++ E EEE+ + ER + R+RS R D+ R
Sbjct: 249 KEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSRSRHSSRTSDR-R 307
Query: 225 RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGH 284
S + ++RSRSR RRRSRS R RR R +S R+HRSRSRDRR RS+S+
Sbjct: 308 CSRSRDHKRSRSRE-RRRSRSRDR-----RRSRSHDRSERKHRSRSRDRR-RSKSRD--- 357
Query: 285 HRSHRHRSHSKSPERSKKSHKKSRRGNE 312
+S++HRS S+ E+ +KS +K +RG++
Sbjct: 358 RKSYKHRSKSRDREQDRKSKEKEKRGSD 385
Score = 63.9 bits (154), Expect = 2e-10
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 182 SALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR 241
+ +EE + + EE + DE+L++ R R+ ++ R + RR +
Sbjct: 225 ATVEELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERER--KRRREEEEREKE 282
Query: 242 RSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSK 301
R+R +RR S R RH S++ R SRSRD + RSRS+ RS R R S+S +RS+
Sbjct: 283 RARDRERRKRSRSRSRHSSRTSDRRCSRSRDHK-RSRSRERRRSRS-RDRRRSRSHDRSE 340
Query: 302 KSHKKSRR 309
+ H+ R
Sbjct: 341 RKHRSRSR 348
Score = 33.9 bits (76), Expect = 0.19
Identities = 32/149 (21%), Positives = 46/149 (30%), Gaps = 29/149 (19%)
Query: 164 RLQKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKP 223
R + R + + R + D S E R S D R +R +
Sbjct: 290 RKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRD 349
Query: 224 RRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPG 283
RR R + R + +HRS+SRDR +SK
Sbjct: 350 RR-----------------------------RSKSRDRKSYKHRSKSRDREQDRKSKEKE 380
Query: 284 HHRSHRHRSHSKSPERSKKSHKKSRRGNE 312
S +S KS R K+S + E
Sbjct: 381 KRGSDDKKSSVKSGSREKQSEDTNTESKE 409
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 70.5 bits (171), Expect = 2e-12
Identities = 52/120 (43%), Positives = 67/120 (55%), Gaps = 15/120 (12%)
Query: 206 RVPSPDHRRRSYRDLDKPR---RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKS 262
R +P RR R + R RSP R RSRSR+P RR RS + R+P+ RR R RS++
Sbjct: 616 RSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRS-RSRTPA-RRGRSRSRT 673
Query: 263 PRRHRSRSRD----RRHRSRSKSPGHHRS------HRHRSHSKSPERSKKSHKKSRRGNE 312
P R RSR RR RSRS++P RS R RSHS++P+R +S S R N+
Sbjct: 674 PARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNK 733
Score = 68.6 bits (166), Expect = 7e-12
Identities = 56/133 (42%), Positives = 68/133 (51%), Gaps = 28/133 (21%)
Query: 206 RVPSPDHRRRSY----------RDLDKPRRSPTLRYRRSRSRSP----RRRSRSPKR--- 248
R SP R RS R+ + RS + R RS SRSP R RSR+P R
Sbjct: 524 RSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGR 583
Query: 249 -RSPSPRRERHRSKSPRRHRSRSRD--RRHRSRSKSPGHHRSH-----RHRSHSKSPER- 299
RS +P R R RS++P R RSRSR RR RSRS++P RS R RS S+SP R
Sbjct: 584 SRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARR 643
Query: 300 --SKKSHKKSRRG 310
+S +RRG
Sbjct: 644 SGRSRSRTPARRG 656
Score = 66.2 bits (160), Expect = 3e-11
Identities = 50/119 (42%), Positives = 62/119 (52%), Gaps = 18/119 (15%)
Query: 206 RVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKR-------RSPSPRRERH 258
R P+ R RS + RS T RRSRSR+P RR RS R R+ SP R R
Sbjct: 576 RTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRS 635
Query: 259 RSKSPRRHRSRSRD----RRHRSRSKSPGHHRSHRHRSHSKSPER---SKKSHKKSRRG 310
RS+SP R RSR RR RSRS++P + R RS S++P R +S +RRG
Sbjct: 636 RSRSPARRSGRSRSRTPARRGRSRSRTP----ARRGRSRSRTPARRSGRSRSRTPARRG 690
Score = 63.5 bits (153), Expect = 2e-10
Identities = 51/108 (47%), Positives = 64/108 (59%), Gaps = 8/108 (7%)
Query: 206 RVPSPDHRRRSYRDLDKPR-RSPTLRYRRSRSRSP-RRRSRSPKRRSPSPRRERHRSKSP 263
R P+ R RS + R RS T RRSRSR+P RRRSRS R+P+ RR R RS++P
Sbjct: 565 RSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRS---RTPA-RRGRSRSRTP 620
Query: 264 RRHRSRSRDR-RHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRG 310
R RSR+R R RSRS+SP RS R RS + + +S +RRG
Sbjct: 621 ARRRSRTRSPVRRRSRSRSPA-RRSGRSRSRTPARRGRSRSRTPARRG 667
Score = 63.2 bits (152), Expect = 3e-10
Identities = 47/107 (43%), Positives = 60/107 (56%), Gaps = 12/107 (11%)
Query: 206 RVPSPDHRRRSYRDLDKPR--RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSP 263
R +P R RS R RS T RRSRSR+P RR RS RS +P R R R++SP
Sbjct: 574 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRS---RSRTPARRRSRTRSP 630
Query: 264 RRHRSRSRD---RRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKS 307
R RSRSR R RSRS++P + R RS S++P R +S ++
Sbjct: 631 VRRRSRSRSPARRSGRSRSRTP----ARRGRSRSRTPARRGRSRSRT 673
Score = 61.6 bits (148), Expect = 9e-10
Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 213 RRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRD 272
R R+ + R R RSRSR+P RRS + R+P+ RR R RS++PRR RSRSR
Sbjct: 648 RSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPA-RRGRSRSRTPRRGRSRSRS 706
Query: 273 RRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
R RS S R R S S+ +S+ S ++SR
Sbjct: 707 LVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSR 742
Score = 61.6 bits (148), Expect = 9e-10
Identities = 49/112 (43%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 206 RVPSPDHRRRSYRDLDKPR---RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKS 262
R P+ R RS + R R+P R RSRSR+P RR RS RS +PRR R RS+S
Sbjct: 650 RTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRS---RSRTPRRGRSRSRS 706
Query: 263 -PRRHRSRSRDRRHRSRSKSPGHH----RSHRHRSHSKSPERSKKSHKKSRR 309
RR RS SR + R RS S R+ + RS S S KKS SRR
Sbjct: 707 LVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRR 758
Score = 57.4 bits (137), Expect = 2e-08
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 12/93 (12%)
Query: 225 RSPTLRYRRSRSRSPR-RRSRSPKR--RSPSPRRERHRSKSPRRHR-SRSRDRRHRSRSK 280
R+PT R SRSRSP+ RRSRS +R RS SP+R R RS+SP+R SRSR+ + R RS+
Sbjct: 498 RTPTKR-GHSRSRSPQWRRSRSAQRWGRSRSPQR-RGRSRSPQRPGWSRSRNTQRRGRSR 555
Query: 281 SPGHHRSH------RHRSHSKSPERSKKSHKKS 307
S RSH R RS S++P R +S ++
Sbjct: 556 SARRGRSHSRSPATRGRSRSRTPARRGRSRSRT 588
Score = 57.4 bits (137), Expect = 2e-08
Identities = 45/133 (33%), Positives = 58/133 (43%), Gaps = 19/133 (14%)
Query: 194 SEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSP 253
S E R P P HRR +P RR + SPR ++ S + RSPSP
Sbjct: 1707 SRSASSSPETRSRTP-PRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSP 1765
Query: 254 R---RERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRS--------------HSKS 296
+ +R RS+S RR ++R+ RR RS S R R RS HS+S
Sbjct: 1766 KPRGLQRSRSRS-RREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRS 1824
Query: 297 PERSKKSHKKSRR 309
P R + S SRR
Sbjct: 1825 PARQESSRTSSRR 1837
Score = 55.8 bits (133), Expect = 5e-08
Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 22/203 (10%)
Query: 128 RKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPRVSALEED 187
RK + + R E E M ++ +E E+V L L+K E+ + A+ E
Sbjct: 62 RKRRVELRCLELEEMMEEQGYEEQQIQEKVATFRLMLLEKDVNPGGKEETPGQRPAVTET 121
Query: 188 MDDVESSEEEEEE-------DEKLERVPSPDHRRRSYRDLDKPRRSPTLRY----RRSRS 236
E +E++ E + S D +RR+ R+ +P P Y S S
Sbjct: 122 HQLAELNEKKNERLRAAFGISDSYVDGSSFDPQRRA-REAKQPAPEPPKPYSLVRESSSS 180
Query: 237 RSP--------RRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSH 288
RSP +++ R + S SPRRER +S ++HRS S ++ + RS +P R
Sbjct: 181 RSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSKRKS 240
Query: 289 RHRSHSKSPERSKKSHKKSRRGN 311
+ + +S RS KSRR +
Sbjct: 241 KDKKRKRS--RSTTPAPKSRRAH 261
Score = 54.7 bits (130), Expect = 1e-07
Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 208 PSPDHRRRSYRDLDKPRRS----PTLRYRRSRSR-SPRRRSRSPKRRSPSPRRERHRSKS 262
P+P R RS RRS P + RRSRSR SP R RS R S + RR R R+
Sbjct: 1858 PAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASP 1917
Query: 263 PRRHRSRSRD---RRHRSRSKSPGHHRSHRHRSHSKSPERSK 301
R RSRSR R RSRS++P R R R+ + RS+
Sbjct: 1918 VSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSR 1959
Score = 52.0 bits (123), Expect = 7e-07
Identities = 45/107 (42%), Positives = 55/107 (51%), Gaps = 17/107 (15%)
Query: 209 SPDHRRRSYRDLDKPRRSPTLRYRRSRSRS---PRRRSRSPKRRSPSPRRERHRSKSPRR 265
SP RRRS + R SP R RRSRSR+ RRRSRS R+P R R RS++P
Sbjct: 1987 SPVTRRRS-----RSRTSPVTR-RRSRSRTSPVTRRRSRS---RTPPAIRRRSRSRTPLL 2037
Query: 266 HRSRSRDR-----RHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKS 307
R RSR R R RSRS++P R R + S R + + S
Sbjct: 2038 PRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSS 2084
Score = 51.6 bits (122), Expect = 9e-07
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 209 SPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPR----RERHRSKSPR 264
+P RR S + R++ R RS S SP RSR+P R SP +S+S R
Sbjct: 1684 TPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSR 1743
Query: 265 RHRS----RSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGN 311
R RS R++ R RS SP R RS S+ E+++ + ++ R G+
Sbjct: 1744 RRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRR-EKTRTTRRRDRSGS 1793
Score = 51.6 bits (122), Expect = 9e-07
Identities = 49/108 (45%), Positives = 59/108 (54%), Gaps = 20/108 (18%)
Query: 209 SPDHRRRSY------RDLDKPRRSPTLRYRRSRSRSP---RRRSRSPKRRSPSPRRERHR 259
SP RRRS R + R SP R RRSRSR+P RRRSRS R+P+ RR R R
Sbjct: 1893 SPVSRRRSRSRTSVTRRRSRSRASPVSR-RRSRSRTPPVTRRRSRS---RTPTTRR-RSR 1947
Query: 260 SKSPRRHRSRSRDR-----RHRSRSK-SPGHHRSHRHRSHSKSPERSK 301
S++P R RSR R R RSRS+ SP R R R+ + RS+
Sbjct: 1948 SRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSR 1995
Score = 51.2 bits (121), Expect = 1e-06
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 206 RVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRER-HRSKSPR 264
R P+P +++ + D+ RRS + RR R +S +++ K RS S ++R HRS +P+
Sbjct: 181 RSPTPKQKKKKKKK-DRGRRSESSSPRRERKKSSKKK----KHRSESESKKRKHRSPTPK 235
Query: 265 RHRSRSRDRRHRSRSKSPGHHRSHRHRSHS-KSPERSKKSHKKSR 308
R +R RSRS +P HRS S S S S +SR
Sbjct: 236 SKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSR 280
Score = 50.8 bits (120), Expect = 2e-06
Identities = 42/93 (45%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 213 RRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP-SPRRERHRSKSPRRHRSRSR 271
RRRS + R SP R RRSRSR+ R RS R SP S RR R R+ R RSRSR
Sbjct: 1885 RRRS-----RSRTSPVSR-RRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSR 1938
Query: 272 --DRRHRSRSKSPGHHRSHRHRSHSKSPERSKK 302
R RSRS++P R RS S++P +++
Sbjct: 1939 TPTTRRRSRSRTP---PVTRRRSRSRTPPVTRR 1968
Score = 50.8 bits (120), Expect = 2e-06
Identities = 47/113 (41%), Positives = 57/113 (50%), Gaps = 24/113 (21%)
Query: 206 RVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSP---RRRSRSPKRRSP-SPRRERHRSK 261
R +P RRRS R+P + RRSRSR+P RRRSRS R SP + RR R R+
Sbjct: 1936 RSRTPTTRRRSRS------RTPPVTRRRSRSRTPPVTRRRSRS--RTSPITRRRSRSRTS 1987
Query: 262 SPRRHRSRSRD-----RRHRSRSKSPGHHRSH-------RHRSHSKSPERSKK 302
R RSRSR RR RSR+ RS R RS S++P +K
Sbjct: 1988 PVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRK 2040
Score = 50.4 bits (119), Expect = 2e-06
Identities = 48/112 (42%), Positives = 61/112 (54%), Gaps = 20/112 (17%)
Query: 209 SPDHRRRSYRDLDKPRRSPTLRYRRSRSRSP---RRRSRSPKRRSPSPRRERHRSKSPR- 264
SP RRRS + R SP R RRSRSR+P RRRSRS R+P R+R RS+SP
Sbjct: 1999 SPVTRRRS-----RSRTSPVTR-RRSRSRTPPAIRRRSRS---RTPLLPRKRSRSRSPLA 2049
Query: 265 -RHRSRSRD----RRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGN 311
R RSRSR R RS ++SP R R + S +RS+ + + R +
Sbjct: 2050 IRRRSRSRTPRTARGKRSLTRSPPAIR--RRSASGSSSDRSRSATPPATRNH 2099
Score = 50.1 bits (118), Expect = 3e-06
Identities = 48/131 (36%), Positives = 57/131 (43%), Gaps = 23/131 (17%)
Query: 192 ESSEEEEEEDEKLERVPSPDHRRRSYRDLDKP------RRSPTLRYRRSRSRSP---RRR 242
ESS R P +R R P R SP +RRSRSR+P RRR
Sbjct: 1829 ESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPAT-HRRSRSRTPLISRRR 1887
Query: 243 SRSPKRRSPSPRRERHRSKSPRRHRSRSRD-----RRHRSRSKSPGHHRSH------RHR 291
SRS R SP RR S R RSRSR RR RSR+ RS R R
Sbjct: 1888 SRS--RTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRR 1945
Query: 292 SHSKSPERSKK 302
S S++P +++
Sbjct: 1946 SRSRTPPVTRR 1956
Score = 49.7 bits (117), Expect = 3e-06
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 206 RVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRR 265
R PSP+ + + P +S T R S P+ +SR+P RR S K+
Sbjct: 1645 RGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLS 1704
Query: 266 HRSRSRDRRHRSRSKSPGHHRSHRHRSHS-KSPERSKKSHKKSRR 309
RSRS +RS++P HR RS S SPE ++KS RR
Sbjct: 1705 RRSRSASSSPETRSRTPPRHR----RSPSVSSPEPAEKSRSSRRR 1745
Score = 49.3 bits (116), Expect = 4e-06
Identities = 50/152 (32%), Positives = 65/152 (42%), Gaps = 35/152 (23%)
Query: 194 SEEEEEEDEKLERVPSP-DHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRR---SRSP--- 246
S E + P+P HR S K R + +S S +P RR SRSP
Sbjct: 431 SRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATA 490
Query: 247 ---KRRSPSPRRERH-RSKSPRRHRSRSRDRRHRSRS----------KSPGHHRS----- 287
+ RS +P + H RS+SP+ RSRS R RSRS + PG RS
Sbjct: 491 KRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR 550
Query: 288 -------HRHRSHSKSPERSKKSHKK--SRRG 310
R RSHS+SP +S + +RRG
Sbjct: 551 RGRSRSARRGRSHSRSPATRGRSRSRTPARRG 582
Score = 49.3 bits (116), Expect = 4e-06
Identities = 41/130 (31%), Positives = 50/130 (38%), Gaps = 6/130 (4%)
Query: 186 EDMDDVESSEEEEEEDEKLER----VPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR 241
E ESS E + R P P + R+ R SP L + SR R
Sbjct: 1650 EGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRS 1709
Query: 242 RSRSPKRRSPSPRRERHRS--KSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPER 299
S SP+ RS +P R R SP RR RS S S R RS S P
Sbjct: 1710 ASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRG 1769
Query: 300 SKKSHKKSRR 309
++S +SRR
Sbjct: 1770 LQRSRSRSRR 1779
Score = 49.3 bits (116), Expect = 4e-06
Identities = 48/109 (44%), Positives = 57/109 (52%), Gaps = 21/109 (19%)
Query: 209 SPDHRRRSYRDLDKP-------RRSPTLRYRRSRSRSP---RRRSRSPKRRSPSPRRERH 258
SP RRRS R P R+PT R RRSRSR+P RRRSRS R+P R R
Sbjct: 1916 SPVSRRRS-RSRTPPVTRRRSRSRTPTTR-RRSRSRTPPVTRRRSRS---RTPPVTRRRS 1970
Query: 259 RSKSPRRHRSRSRDR-----RHRSRSK-SPGHHRSHRHRSHSKSPERSK 301
RS++ R RSR R R RSRS+ SP R R R+ + RS+
Sbjct: 1971 RSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSR 2019
Score = 48.9 bits (115), Expect = 6e-06
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 214 RRSYRDLDKPR--RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKS--------- 262
RR KPR + R RR ++R+ RRR RS +S S RR+R RS+S
Sbjct: 1758 RRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGG 1817
Query: 263 --------PRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKS------HKKSR 308
R+ SR+ RR R RS++P R S +P + +S H++SR
Sbjct: 1818 SGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSR 1877
Score = 48.5 bits (114), Expect = 7e-06
Identities = 46/114 (40%), Positives = 57/114 (50%), Gaps = 23/114 (20%)
Query: 218 RDLDKPRRSPTLRYRRSRSRS--PRRR-------SRSPKRRSPS---PRRERHRSKSPRR 265
RD +S + R +RSRSRS RRR SRSP R+ S RR R RS++P
Sbjct: 1788 RDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPT 1847
Query: 266 HRSRSRDRRH-----RSRSK-SPGHHRSHRHRSHSKSPERSKK-----SHKKSR 308
R RSR R RSRS+ SP HR R R+ S RS+ S ++SR
Sbjct: 1848 SRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSR 1901
Score = 48.1 bits (113), Expect = 1e-05
Identities = 40/87 (45%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 225 RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGH 284
RS T R RSRSRS RR RS R RR R S S R+++SR+ RR RS S SP
Sbjct: 693 RSRTPRRGRSRSRSLVRRGRSHSR--TPQRRGRSGSSSERKNKSRTSQRRSRSNS-SPEM 749
Query: 285 HRSH--RHRSHSKSPERSKKSHKKSRR 309
+S RS S S RSK + S R
Sbjct: 750 KKSRISSRRSRSLSSPRSKAKSRLSLR 776
Score = 47.8 bits (112), Expect = 1e-05
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 230 RYRRSRSRS-PRRRSRSPKRRSPSP-RRERHRSKSPRRHRSRSRD-----RRHRSRSKSP 282
R RR RSR+ P R RS R SP+P +R R R+ RSRSR RR RSR+
Sbjct: 1836 RRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPV 1895
Query: 283 GHHRSHRHRSHSKSPERSKKSHKKSRR 309
RS S ++ RS+ S RR
Sbjct: 1896 SRRRSRSRTSVTRRRSRSRASPVSRRR 1922
Score = 46.6 bits (109), Expect = 3e-05
Identities = 43/132 (32%), Positives = 58/132 (43%), Gaps = 16/132 (12%)
Query: 192 ESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRR----SPTLRYRRSRSRSPRRRSRSP- 246
ESS ++ ++ D RRS + PRR S + RS S S +R+ RSP
Sbjct: 176 ESSSSRSPTPKQKKKKKKKDRGRRS--ESSSPRRERKKSSKKKKHRSESESKKRKHRSPT 233
Query: 247 ---KRRSPSPRRERHRS-----KSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPE 298
KR+S +R+R RS KS R HRS S D S S RS ++H+ +
Sbjct: 234 PKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSA-SSSDTSRSRSRSAAAKTHTTALA 292
Query: 299 RSKKSHKKSRRG 310
S RRG
Sbjct: 293 GRSPSPASGRRG 304
Score = 44.3 bits (103), Expect = 1e-04
Identities = 41/139 (29%), Positives = 56/139 (40%), Gaps = 6/139 (4%)
Query: 176 QLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSR 235
Q R + E + +S+ + E S RRS R L PR + R S
Sbjct: 719 QRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRS-RSLSSPRSKA--KSRLSL 775
Query: 236 SRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS---HRHRS 292
RS S PK++S +P R S + +SR+ RR RS S P +S R
Sbjct: 776 RRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSH 835
Query: 293 HSKSPERSKKSHKKSRRGN 311
S SP KS R+G+
Sbjct: 836 SSSSPHPKVKSGTPPRQGS 854
Score = 38.9 bits (89), Expect = 0.006
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 209 SPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSP-RRHR 267
SP+ +S P + R S SP SPK +P+P R S SP ++R
Sbjct: 408 SPEKLPQSSSSESSPPSPQPTKVSRHASSSP----ESPK-PAPAPGSHREISSSPTSKNR 462
Query: 268 SRSRDRRHRSRSKSP----GHHRS----HRHRSHSKSPERSKKSHKKSR 308
S R +R +S S +P G RS R RS S++P +K+ H +SR
Sbjct: 463 SHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTP--TKRGHSRSR 509
Score = 38.9 bits (89), Expect = 0.006
Identities = 33/121 (27%), Positives = 43/121 (35%), Gaps = 7/121 (5%)
Query: 193 SSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR-----RSRSPK 247
SS SP + + L KP RSRSPR+ R
Sbjct: 2632 SSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSL 2691
Query: 248 RRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKS 307
SP RR SPR +S S +R R + SH+ R + SP + H+ S
Sbjct: 2692 SYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRETPSPRPMR--HRSS 2749
Query: 308 R 308
R
Sbjct: 2750 R 2750
Score = 38.1 bits (87), Expect = 0.010
Identities = 43/155 (27%), Positives = 61/155 (39%), Gaps = 34/155 (21%)
Query: 182 SALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR 241
S+ E D+ S +E E D SPD + ++ L + RS + S+SR R
Sbjct: 1541 SSQELDVKPSASPQERSESDS------SPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPR 1594
Query: 242 RSRS-----------------------PKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSR 278
RSRS P+ ++P+PR RS+S + R S
Sbjct: 1595 RSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSS 1654
Query: 279 SKSPGHH----RSHRHRSHSKSPERSKKSHKKSRR 309
++S H R+ R S S SPE KS RR
Sbjct: 1655 TESSPEHPPKSRTARRGSRS-SPEPKTKSRTPPRR 1688
Score = 38.1 bits (87), Expect = 0.010
Identities = 45/150 (30%), Positives = 54/150 (36%), Gaps = 37/150 (24%)
Query: 194 SEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR--------RRSRS 245
S E D K P S DKPR +P + S P+ RRSRS
Sbjct: 1579 SGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRS 1638
Query: 246 ---PKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRS--------KSPGHHRS------- 287
K R PSP SP H +SR R SRS ++P RS
Sbjct: 1639 GSSSKGRGPSPEGSSSTESSPE-HPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPEL 1697
Query: 288 -------HRHRSHSKSPE---RSKKSHKKS 307
R RS S SPE R+ H++S
Sbjct: 1698 TRKARLSRRSRSASSSPETRSRTPPRHRRS 1727
Score = 37.4 bits (85), Expect = 0.017
Identities = 40/129 (31%), Positives = 54/129 (41%), Gaps = 23/129 (17%)
Query: 205 ERVPSPDHRR--RSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPS---------- 252
E+ +P R S D + R+P+ R+ S S PR +S +P R+SPS
Sbjct: 862 EQSVTPQRRSCFESSPDPELKSRTPS-RHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVK 920
Query: 253 ----PRRERHR-SKSPRRHRSRSRDRRHRSRSKSPGHHRSHR-----HRSHSKSPERSKK 302
PR+ H S SP R SR RSRS SP + R S S SP+ K
Sbjct: 921 AIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVK 980
Query: 303 SHKKSRRGN 311
R+ +
Sbjct: 981 PETPPRQSH 989
Score = 37.4 bits (85), Expect = 0.017
Identities = 37/120 (30%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query: 190 DVESSEEEEEEDEKLERVPSPDHR-RRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKR 248
D E S + + L+RVPSP + + R+ P +P R RRS S S S S
Sbjct: 2562 DSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSS 2621
Query: 249 RSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSP--ERSKKSHKK 306
S S S S S S S +K PG + S K P ER +S +K
Sbjct: 2622 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAK-PGPQALPKPASPKKPPPGERRSRSPRK 2680
Score = 33.9 bits (76), Expect = 0.19
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 223 PRR-SPTLRYRRSRSRSPRRRS-----RSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHR 276
PR+ S T +S +P+RRS P+ +S +P R SP R +S + R+
Sbjct: 850 PRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSP 909
Query: 277 SRSKSPGHH----RSHRHRSH--SKSPERSKKSHKKSRR 309
SRS SP S R RSH S SP S+ + + + R
Sbjct: 910 SRSSSPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPR 948
Score = 33.1 bits (74), Expect = 0.33
Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 192 ESSEEEEEEDEK-LERVPSPDHRRR-SYRDLD-KPRRSPTLRYRRSRSRSPRRRSRSPKR 248
E S E D+K + R P R S ++LD KP SP + RS S K
Sbjct: 1515 ERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASP-------QERSESDSSPDSKA 1567
Query: 249 RSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKS 281
++ +P R+R RS S S+SR RSRS S
Sbjct: 1568 KTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGS 1600
Score = 30.4 bits (67), Expect = 2.1
Identities = 36/128 (28%), Positives = 50/128 (39%), Gaps = 21/128 (16%)
Query: 193 SSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPS 252
+S + E + PS + + D DK +S T S SP R S P+ +P+
Sbjct: 316 TSTQRPSSPETATKQPSSPYEDK---DKDKKEKSAT-----RPSPSPERSSTGPEPPAPT 367
Query: 253 P-RRERH-----------RSKSPRRHRSRSRDRRHRSRSKSPGH-HRSHRHRSHSKSPER 299
P ERH S+ P S + R RS KSP +S S SP+
Sbjct: 368 PLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQP 427
Query: 300 SKKSHKKS 307
+K S S
Sbjct: 428 TKVSRHAS 435
>gi|116812577 LUC7-like 2 [Homo sapiens]
Length = 392
Score = 69.7 bits (169), Expect = 3e-12
Identities = 51/127 (40%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
Query: 184 LEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR-R 242
+ E +++++ E++E ER+ + R R R+ + RS + +RSRSR RR R
Sbjct: 221 IREKLEELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHR 280
Query: 243 SRSPKRRSPSPRRERHRSKS-PRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSK 301
SRS R R+ R RSKS +RHR RSR SRS+S H RS RH S +S ERSK
Sbjct: 281 SRSMSRE----RKRRTRSKSREKRHRHRSRSS---SRSRSRSHQRS-RHSSRDRSRERSK 332
Query: 302 KSHKKSR 308
+ K R
Sbjct: 333 RRSSKER 339
Score = 66.6 bits (161), Expect = 3e-11
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 202 EKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSK 261
EKLE + +R + + R L+ R R R R + R + S +P+R R R
Sbjct: 223 EKLEEL------KRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREH 276
Query: 262 SPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGN 311
R RS SR+R+ R+RSKS + HRHRS S S RS +SH++SR +
Sbjct: 277 RRHRSRSMSRERKRRTRSKS--REKRHRHRSRSSSRSRS-RSHQRSRHSS 323
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 67.8 bits (164), Expect = 1e-11
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 179 PRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDK----PRRSPTLRYRRS 234
P VS++ E ESS EE+++ E +V + + ++ DK +R +LR R
Sbjct: 1770 PVVSSMPERAS--ESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSK 1827
Query: 235 RSRSPRRRSRSPKRRSPSPRRER------HRSKSPRRHRSRSRDRRHRSRSKSPGHH--- 285
RS+S +SR S S R+R HRS++ R RSR R R RSRSKS G
Sbjct: 1828 RSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVS 1887
Query: 286 -----RSHRHRSHSKSPERSKKSHKKSRR 309
RS +HRS S+ +R + S + +R+
Sbjct: 1888 KEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
Score = 65.9 bits (159), Expect = 5e-11
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 167 KRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRS 226
+R V +E + P+ + + SS + + + R +P R RS+ + RRS
Sbjct: 1883 RRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRA-RSRTPSRRSRSHTP-SRRRRS 1940
Query: 227 PTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRS---RSKSPG 283
++ RRS S SP RRSR+P RRS +P R RS++P R RSR+ RR R+ RS++P
Sbjct: 1941 RSVGRRRSFSISPSRRSRTPSRRSRTPSR---RSRTPSR-RSRTPSRRSRTPSRRSRTPS 1996
Query: 284 HHRSH----RHRSHSKSPERSKKSHKKSRR 309
R R RS S SP R ++S RR
Sbjct: 1997 RRRRSRSVVRRRSFSISPVRLRRSRTPLRR 2026
Score = 60.1 bits (144), Expect = 2e-09
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSEEEEEE--DEKLERVPSPDHRRRSYRDLDKPRRSPTL 229
++ E+ + R S+L +SSE + + E R + +S+R + R
Sbjct: 1810 DKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRR 1869
Query: 230 RYR--RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
R R RSRS+S RRS S ++R SP+ HRSKS R R RS R +R ++ S
Sbjct: 1870 RRRSSRSRSKSRGRRSVSKEKRKRSPK---HRSKSRERKRKRSSSRDNRKTVRARSRTPS 1926
Query: 288 HRHRSHSKSPERSKKSHKKSRR 309
R RSH +P R ++S RR
Sbjct: 1927 RRSRSH--TPSRRRRSRSVGRR 1946
Score = 52.8 bits (125), Expect = 4e-07
Identities = 42/101 (41%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 208 PSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHR 267
PS R S R RRS T RSR+P RRSR+P RRS +P R R RS+S R R
Sbjct: 1953 PSRRSRTPSRRSRTPSRRSRT---PSRRSRTPSRRSRTPSRRSRTPSRRR-RSRSVVRRR 2008
Query: 268 SRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
S S RS++P R S+SP R K+S R
Sbjct: 2009 SFSISPVRLRRSRTP------LRRRFSRSPIRRKRSRSSER 2043
Score = 48.5 bits (114), Expect = 7e-06
Identities = 40/94 (42%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 206 RVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRR 265
R PS R S R RRS T RRSR+ S R R+ S +RRS S R R S SP R
Sbjct: 1958 RTPSRRSRTPSRRSRTPSRRSRTPS-RRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVR 2016
Query: 266 HRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPER 299
R RSR R S+SP + R +SP+R
Sbjct: 2017 LR-RSRTPLRRRFSRSPIRRKRSRSSERGRSPKR 2049
Score = 43.9 bits (102), Expect = 2e-04
Identities = 42/98 (42%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 193 SSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRR--- 249
S + R PS R S R RRS T RRSR+ S RRRSRS RR
Sbjct: 1952 SPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPS-RRSRTPSRRRRSRSVVRRRSF 2010
Query: 250 SPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
S SP R R RS++P R R SR R RS+S RS
Sbjct: 2011 SISPVRLR-RSRTPLRRRF-SRSPIRRKRSRSSERGRS 2046
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 67.8 bits (164), Expect = 1e-11
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 179 PRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDK----PRRSPTLRYRRS 234
P VS++ E ESS EE+++ E +V + + ++ DK +R +LR R
Sbjct: 1770 PVVSSMPERAS--ESSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSK 1827
Query: 235 RSRSPRRRSRSPKRRSPSPRRER------HRSKSPRRHRSRSRDRRHRSRSKSPGHH--- 285
RS+S +SR S S R+R HRS++ R RSR R R RSRSKS G
Sbjct: 1828 RSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVS 1887
Query: 286 -----RSHRHRSHSKSPERSKKSHKKSRR 309
RS +HRS S+ +R + S + +R+
Sbjct: 1888 KEKRKRSPKHRSKSRERKRKRSSSRDNRK 1916
Score = 65.9 bits (159), Expect = 5e-11
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 13/150 (8%)
Query: 167 KRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRS 226
+R V +E + P+ + + SS + + + R +P R RS+ + RRS
Sbjct: 1883 RRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRA-RSRTPSRRSRSHTP-SRRRRS 1940
Query: 227 PTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRS---RSKSPG 283
++ RRS S SP RRSR+P RRS +P R RS++P R RSR+ RR R+ RS++P
Sbjct: 1941 RSVGRRRSFSISPSRRSRTPSRRSRTPSR---RSRTPSR-RSRTPSRRSRTPSRRSRTPS 1996
Query: 284 HHRSH----RHRSHSKSPERSKKSHKKSRR 309
R R RS S SP R ++S RR
Sbjct: 1997 RRRRSRSVVRRRSFSISPVRLRRSRTPLRR 2026
Score = 60.1 bits (144), Expect = 2e-09
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 9/142 (6%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSEEEEEE--DEKLERVPSPDHRRRSYRDLDKPRRSPTL 229
++ E+ + R S+L +SSE + + E R + +S+R + R
Sbjct: 1810 DKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRR 1869
Query: 230 RYR--RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
R R RSRS+S RRS S ++R SP+ HRSKS R R RS R +R ++ S
Sbjct: 1870 RRRSSRSRSKSRGRRSVSKEKRKRSPK---HRSKSRERKRKRSSSRDNRKTVRARSRTPS 1926
Query: 288 HRHRSHSKSPERSKKSHKKSRR 309
R RSH +P R ++S RR
Sbjct: 1927 RRSRSH--TPSRRRRSRSVGRR 1946
Score = 52.8 bits (125), Expect = 4e-07
Identities = 42/101 (41%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 208 PSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHR 267
PS R S R RRS T RSR+P RRSR+P RRS +P R R RS+S R R
Sbjct: 1953 PSRRSRTPSRRSRTPSRRSRT---PSRRSRTPSRRSRTPSRRSRTPSRRR-RSRSVVRRR 2008
Query: 268 SRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
S S RS++P R S+SP R K+S R
Sbjct: 2009 SFSISPVRLRRSRTP------LRRRFSRSPIRRKRSRSSER 2043
Score = 48.5 bits (114), Expect = 7e-06
Identities = 40/94 (42%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 206 RVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRR 265
R PS R S R RRS T RRSR+ S R R+ S +RRS S R R S SP R
Sbjct: 1958 RTPSRRSRTPSRRSRTPSRRSRTPS-RRSRTPSRRSRTPSRRRRSRSVVRRRSFSISPVR 2016
Query: 266 HRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPER 299
R RSR R S+SP + R +SP+R
Sbjct: 2017 LR-RSRTPLRRRFSRSPIRRKRSRSSERGRSPKR 2049
Score = 43.9 bits (102), Expect = 2e-04
Identities = 42/98 (42%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 193 SSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRR--- 249
S + R PS R S R RRS T RRSR+ S RRRSRS RR
Sbjct: 1952 SPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPS-RRSRTPSRRRRSRSVVRRRSF 2010
Query: 250 SPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
S SP R R RS++P R R SR R RS+S RS
Sbjct: 2011 SISPVRLR-RSRTPLRRRF-SRSPIRRKRSRSSERGRS 2046
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 67.4 bits (163), Expect = 2e-11
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 192 ESSEEEEEEDEKLERVPSPDHRR-RSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKR-- 248
E +++E D+ ER+ S ++ R R K R + RSR R R RSR K+
Sbjct: 87 EHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSR 146
Query: 249 -RSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKS 307
RS ++ R RS+ ++ RSRSR+R+ R RS+S R HRHR+ S+S RS+ +K
Sbjct: 147 SRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSR-HRHRTRSRSRTRSRSRDRKK 205
Query: 308 R 308
R
Sbjct: 206 R 206
Score = 53.9 bits (128), Expect = 2e-07
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 11/123 (8%)
Query: 194 SEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSP 253
S+++ + K E +H R+ + R++R +S R RS S R
Sbjct: 75 SKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRS---- 130
Query: 254 RRERHRSKSPRRHRSRSRDR-------RHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKK 306
R RHRS+S R +SRSR R R R R KS R + R S+S RS+ H+
Sbjct: 131 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT 190
Query: 307 SRR 309
R
Sbjct: 191 RSR 193
Score = 53.9 bits (128), Expect = 2e-07
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 180 RVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSP 239
R+++ E D + E + R S + R RS K RS + ++SRSRS
Sbjct: 101 RLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSR 160
Query: 240 RR-----RSRSPKRR--SPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRS 292
R RSR KRR S S R RHR ++ R R+RSR R + R + P R+
Sbjct: 161 ERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRT 220
Query: 293 HSKSPERSKKS 303
S P R + +
Sbjct: 221 PSPPPFRGRNT 231
Score = 53.1 bits (126), Expect = 3e-07
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Query: 197 EEEEDEKLERVPSPDH-RRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRR 255
+ E D SPD +++ ++ R+ Y RSRSRS R+ +S R
Sbjct: 5 DTERDGLAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSD--NEGRKHR 62
Query: 256 ERHRSKSPRRHRSRSR-DRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRR 309
R RSK RRH S+ + ++H+S + H S + R S E + HK+ R
Sbjct: 63 SRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKER 117
Score = 52.8 bits (125), Expect = 4e-07
Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 172 EEAE-QLEPRVSALEEDMDDVESSEEEEEEDEK----LERVPSPDHRRRSYRDLD-KPRR 225
E++E + PR S S E + + D + R S + RR +D K +
Sbjct: 25 EQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSKKHK 84
Query: 226 SPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRH-RSRSRDRRHRSRSKSPGH 284
S + S R R S + +R+ +S R H RSRSR+RRHRSRS+
Sbjct: 85 SEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKK 144
Query: 285 HRSHRHRSHSKSPERSKKSHKKSRRGNE 312
RS R R KS RS++ K R E
Sbjct: 145 SRS-RSRERKKSRSRSRERKKSRSRSRE 171
Score = 52.4 bits (124), Expect = 5e-07
Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 4/119 (3%)
Query: 194 SEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSP 253
S +E + E + +S DK S R R + S + R + +R+S
Sbjct: 63 SRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRG 122
Query: 254 RRERHRSKSPRRHRSRSRDR---RHRSRSKSPGHHRS-HRHRSHSKSPERSKKSHKKSR 308
R RRHRSRSR+R R RSR + RS R +S S+S ER ++ +SR
Sbjct: 123 RSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSR 181
Score = 48.9 bits (115), Expect = 6e-06
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 181 VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR 240
++A + + D + + + D+K E+ R S + R R R+S + +
Sbjct: 1 MAASDTERDGLAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRK 60
Query: 241 RRSRSPKRRSPSPRRERHRSKSPRRHRS-----------RSRDRRHRSRSKSPGHHR--- 286
RSRS RS RR + KS ++H+S + R+R + S + H R
Sbjct: 61 HRSRS---RSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKER 117
Query: 287 -SHRHRSHSKSPERSKKSHKKSR 308
S R RSHS+S R ++ +SR
Sbjct: 118 KSSRGRSHSRSRSRERRHRSRSR 140
Score = 46.2 bits (108), Expect = 4e-05
Identities = 41/156 (26%), Positives = 59/156 (37%), Gaps = 25/156 (16%)
Query: 173 EAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTL-RY 231
E + L P ++ + D ++E+ E R + R R ++ R+S R
Sbjct: 7 ERDGLAPEKTSPDRD------KKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRK 60
Query: 232 RRSRSRSPR-RRSRSPKRRSPSPRRERHRSKS-----------------PRRHRSRSRDR 273
RSRSRS RR S + S + E H K R R +
Sbjct: 61 HRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSS 120
Query: 274 RHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRR 309
R RS S+S R HR RS + RS+ +K R
Sbjct: 121 RGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSR 156
Score = 30.0 bits (66), Expect = 2.8
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 166 QKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRR 225
++R+ E+ + R + E S E ++ ER RR R + R
Sbjct: 132 ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER-----KRRIRSRSRSRSRH 186
Query: 226 SPTLRYR-RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRD 272
R R R+RSRS R+ R K R S R S P R R+ + D
Sbjct: 187 RHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMD 234
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 67.0 bits (162), Expect = 2e-11
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 15/156 (9%)
Query: 165 LQKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPR 224
++ + L++ + E + + ++ + E +++E D+ ER+ S ++ ++ K R
Sbjct: 2 IRTNFFLKQGRRHESKDKSSKKHKSE-EHNDKEHSSDKGRERLNSSENGEDRHKR--KER 58
Query: 225 RSPTLR-YRRSRSRSPRRRSRSPKR---RSPSPRRERHRSKSPRRHRSRSRDR----RHR 276
+S R + RSRSR R RSRS +R RS S R++ RS+S R +SRSR R R R
Sbjct: 59 KSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIR 118
Query: 277 SRSKSPGHHRSHRHRSHSKSPERS---KKSHKKSRR 309
SRS+S HR HR RS S++ RS KK +K RR
Sbjct: 119 SRSRSRSRHR-HRTRSRSRTRSRSRDRKKRIEKPRR 153
Score = 53.9 bits (128), Expect = 2e-07
Identities = 42/131 (32%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 180 RVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSP 239
R+++ E D + E + R S + R RS K RS + ++SRSRS
Sbjct: 42 RLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSRERKKSRSRSRERKKSRSRSR 101
Query: 240 RR-----RSRSPKRR--SPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRS 292
R RSR KRR S S R RHR ++ R R+RSR R + R + P R+
Sbjct: 102 ERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRT 161
Query: 293 HSKSPERSKKS 303
S P R + +
Sbjct: 162 PSPPPFRGRNT 172
Score = 49.7 bits (117), Expect = 3e-06
Identities = 38/122 (31%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 191 VESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRS 250
++ E +D+ ++ S +H DK S R R + S + R +
Sbjct: 8 LKQGRRHESKDKSSKKHKSEEHN-------DKEHSSDKGRERLNSSENGEDRHK------ 54
Query: 251 PSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRG 310
R+ER S+ RSRSR+RRHRSRS+ RS R R KS RS++ K R
Sbjct: 55 ---RKERKSSRGRSHSRSRSRERRHRSRSRERKKSRS-RSRERKKSRSRSRERKKSRSRS 110
Query: 311 NE 312
E
Sbjct: 111 RE 112
Score = 30.0 bits (66), Expect = 2.8
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Query: 166 QKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRR 225
++R+ E+ + R + E S E ++ ER RR R + R
Sbjct: 73 ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRER-----KRRIRSRSRSRSRH 127
Query: 226 SPTLRYR-RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRD 272
R R R+RSRS R+ R K R S R S P R R+ + D
Sbjct: 128 RHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMD 175
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 66.6 bits (161), Expect = 3e-11
Identities = 58/178 (32%), Positives = 81/178 (45%), Gaps = 29/178 (16%)
Query: 160 IILPRLQKRYVLEEAEQLEPRV--------SALEEDMDDVESSEEEEEEDEKLERVPSPD 211
++ P L+ +E E+ RV +A+E D + + + R PS
Sbjct: 205 LVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSS 264
Query: 212 H--------RRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPR--RERHRSK 261
RRRS+ RRS + R RRS SR RRSRS + + +E+ RSK
Sbjct: 265 RHRRSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSK 324
Query: 262 SP-------RRHRSRSRDRRHR---SRSKSPGHHRSHRHR-SHSKSPERSKKSHKKSR 308
+P RR RS SR+RR R S ++SP RS + + S S SP R KK KK +
Sbjct: 325 TPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDK 382
Score = 65.9 bits (159), Expect = 5e-11
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 174 AEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDH-RRRSYRDLDKPRRSPTLRYR 232
++++E + + E + ++ E ++++EK S RRR + RRS + R
Sbjct: 216 SKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRR 275
Query: 233 RSRSRS-PRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHR 291
RS S+S RRRS+SP+RR R RS+S + R + ++ + + RSK+P S R
Sbjct: 276 RSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARR 335
Query: 292 SHSKSPERSKKSHKKSRR 309
S S S ER ++ + R
Sbjct: 336 SRSASRERRRRRSRSGTR 353
Score = 60.5 bits (145), Expect = 2e-09
Identities = 47/123 (38%), Positives = 62/123 (50%), Gaps = 15/123 (12%)
Query: 191 VESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRS 250
++S +E +E ++RV + + DK + R+ RSRSRS RRR+ S
Sbjct: 210 LKSDTSSKEIEEAMKRVREAQSLISAAIEPDK--KEEKRRHSRSRSRSRRRRTPS----- 262
Query: 251 PSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRH----RSHSKSPERSKKSHKK 306
S R R RS+S RR S+SR RR RSKSP RSH RS S S R KK K
Sbjct: 263 -SSRHRRSRSRSRRRSHSKSRSRR---RSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDK 318
Query: 307 SRR 309
++
Sbjct: 319 EKK 321
Score = 55.5 bits (132), Expect = 6e-08
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 194 SEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKR---RS 250
+ ++++ED++ +R +P + R R R RS +RSP++ RSPKR RS
Sbjct: 310 TRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKK-PRSPKRKLSRS 368
Query: 251 PSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKS 303
PSPRR + + K + + RSRD R RS SK + +S K +R +KS
Sbjct: 369 PSPRRHK-KEKKKDKDKERSRDERERSTSK--------KKKSKDKEKDRERKS 412
Score = 41.6 bits (96), Expect = 0.001
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 246 PKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHK 305
P ++ R R RS+S RR R+ S R RSRS+S R RSHSKS R +
Sbjct: 239 PDKKEEKRRHSRSRSRS-RRRRTPSSSRHRRSRSRS-------RRRSHSKSRSRRRSKSP 290
Query: 306 KSRRGN 311
+ RR +
Sbjct: 291 RRRRSH 296
Score = 36.2 bits (82), Expect = 0.038
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 193 SSEEEEEEDEKLERVPSPD-HRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP 251
S ++ KL R PSP H++ +D DK RSR R RS S K++S
Sbjct: 354 SPKKPRSPKRKLSRSPSPRRHKKEKKKDKDK-----------ERSRDERERSTSKKKKSK 402
Query: 252 SPRRERHR-SKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSP 297
++R R S+S + + +RD + + S + + K P
Sbjct: 403 DKEKDRERKSESDKDVKQVTRDYDEEEQG-----YDSEKEKKEEKKP 444
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 66.2 bits (160), Expect = 3e-11
Identities = 48/108 (44%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 211 DHRRRSYRDLDKPR-RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSR 269
D RR RD D+ R RS + RRSRSR R+R R + R RER RS+S R RSR
Sbjct: 36 DDRRSRSRDRDRRRERSRSRDKRRSRSRD-RKRLRRSRSRERDRSRERRRSRSRDRRRSR 94
Query: 270 SRDRRHRSRSKSPGHHRSHRHRSHSKSPER-----SKKSHKKSRRGNE 312
SR R RSRS SPG ++S + + S+S E+ S K KK + E
Sbjct: 95 SRSRGRRSRSSSPG-NKSKKTENRSRSKEKTDGGESSKEKKKDKDDKE 141
Score = 63.2 bits (152), Expect = 3e-10
Identities = 47/97 (48%), Positives = 56/97 (57%), Gaps = 9/97 (9%)
Query: 214 RRSYRDLDKPRRSPTLRYRRSRSRS-PRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRD 272
+RS R D+ RS RR RSRS +RRSRS R+ R R R +S R RSRSRD
Sbjct: 30 KRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRD 89
Query: 273 RRHRSRSKSPGHHRSHRHRSHSKSP-ERSKKSHKKSR 308
RR RSRS+S G RS S SP +SKK+ +SR
Sbjct: 90 RR-RSRSRSRG------RRSRSSSPGNKSKKTENRSR 119
Score = 53.9 bits (128), Expect = 2e-07
Identities = 35/81 (43%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 233 RSRSRSP--RRRSRSPKRRSPSPRRERHRSKSPRR--HRSRSRDRRHRSRSKSPGHHRSH 288
RSRSRSP +R R RRS S R+R R +S R RSRSRDR+ RS+S RS
Sbjct: 21 RSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSR 80
Query: 289 RHRSHSKSPERSKKSHKKSRR 309
R R +S + RR
Sbjct: 81 ERRRSRSRDRRRSRSRSRGRR 101
Score = 51.2 bits (121), Expect = 1e-06
Identities = 35/88 (39%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 230 RYRRSRSRSPRRRSRSPKRRSPSP--------RRERHRSKSPRRHRSRSRDRRHRSRSKS 281
R+ R RS S R + RSPS RR R R + RR RSRSRD+R RSRS+
Sbjct: 6 RHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKR-RSRSRD 64
Query: 282 PGHHRSHRHRSHSKSPERSKKSHKKSRR 309
R R R +S ER + + RR
Sbjct: 65 RKRLRRSRSRERDRSRERRRSRSRDRRR 92
Score = 47.4 bits (111), Expect = 2e-05
Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 232 RRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRH---RSRSKSPGHHRSH 288
R R RS R + RS SP +R + RR RSR RDRR RSR K R
Sbjct: 6 RHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDR 65
Query: 289 RHRSHSKSPERSKKSHKKSRRGNE 312
+ S+S ER + ++ R +
Sbjct: 66 KRLRRSRSRERDRSRERRRSRSRD 89
>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
Length = 344
Score = 66.2 bits (160), Expect = 3e-11
Identities = 53/128 (41%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Query: 182 SALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR 241
S ++ +D ++ +E +E P HRR SY RS + RRSRSRS R
Sbjct: 157 SDMKRALDKLDGTEINGRNIRLIEDKPRTSHRR-SYSG----SRSRSRSRRRSRSRS--R 209
Query: 242 RSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKS-PGHHRSHRHRSHSKSPERS 300
RS + RS S R R RS+S R RSRS+ R+ RS+SKS P R SHS S RS
Sbjct: 210 RSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRG----SHSHSRSRS 265
Query: 301 KKSHKKSR 308
K ++KSR
Sbjct: 266 KDEYEKSR 273
Score = 62.0 bits (149), Expect = 7e-10
Identities = 46/93 (49%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 221 DKPRRSPTLRYRRSRSRS-PRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRS 279
DKPR S Y SRSRS RRRSRS RRS R R RS S R RSRSR + RSRS
Sbjct: 181 DKPRTSHRRSYSGSRSRSRSRRRSRSRSRRSS---RSRSRSISKSRSRSRSRSKG-RSRS 236
Query: 280 KSPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312
+S G + +S KS +R SH +SR +E
Sbjct: 237 RSKGRKSRSKSKSKPKS-DRGSHSHSRSRSKDE 268
Score = 42.7 bits (99), Expect = 4e-04
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 231 YRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS--- 287
Y +SRSRS RSRSPK + + RS+S R S ++RS SP R+
Sbjct: 269 YEKSRSRS---RSRSPKENGKGDIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRATSR 325
Query: 288 HRHRSHSKSPERSKKSHK 305
R RS SKS RS+ S +
Sbjct: 326 SRSRSRSKSRSRSRSSSR 343
Score = 42.4 bits (98), Expect = 5e-04
Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 24/140 (17%)
Query: 193 SSEEEEEEDEKLERVPSPDHRRRSYRDLDKPR-RSPTLRYRRSRSRSPRRRSRSPKRRSP 251
S + R S R R + K R RS + RSRSRS R+SRS + P
Sbjct: 192 SGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKP 251
Query: 252 SPRRERH---RSKSP---RRHRSRSRDR----------------RHRSRSKSPGHHRSHR 289
R H RS+S + RSRSR R R +SRS SP +
Sbjct: 252 KSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIKSKSRSRSQSRSNSPLPVPPSK 311
Query: 290 HRSHSKSPER-SKKSHKKSR 308
RS S P+R + +S +SR
Sbjct: 312 ARSVSPPPKRATSRSRSRSR 331
Score = 36.2 bits (82), Expect = 0.038
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 194 SEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRS---PKRRS 250
S++E E+ R SP + D+ RS + S P ++RS P +R+
Sbjct: 265 SKDEYEKSRSRSRSRSPKENGKG--DIKSKSRSRSQSRSNSPLPVPPSKARSVSPPPKRA 322
Query: 251 PSPRRERHRSKSPRRHRSRSRD 272
S R R RSKS R RS SRD
Sbjct: 323 TSRSRSRSRSKSRSRSRSSSRD 344
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 66.2 bits (160), Expect = 3e-11
Identities = 59/196 (30%), Positives = 79/196 (40%), Gaps = 55/196 (28%)
Query: 165 LQKRYVLEEAEQLEPRVSALEEDMD-DVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKP 223
L+K + + + E S ++D D D EE+E EK ER SP RR+S +
Sbjct: 126 LKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSP-RRRKSRSPSPRR 184
Query: 224 RRSPTLRYR-RSRSRSPRRRSRS------------------------------------- 245
R SP R R RS SRSPR R++S
Sbjct: 185 RSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDI 244
Query: 246 ---------PKRRSPSPRRERHRSKSPRRHRSRSRDR---RHRSRSKSPGH---HRSHRH 290
P+ + PSP + + K + R RSR R R R+RS+SP H R HR
Sbjct: 245 LKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRS 304
Query: 291 RSHSKSPERSKKSHKK 306
RS S SP R ++
Sbjct: 305 RSRSYSPRRRPSPRRR 320
Score = 60.5 bits (145), Expect = 2e-09
Identities = 51/127 (40%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 192 ESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYR-RSRSRSPRRRSRSPKRRS 250
++S++E+E+++ R S R R P R+R RSRS SPRRR SP+RR
Sbjct: 263 KNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRP-SPRRR- 320
Query: 251 PSPRRE---RHRSKSPRRHRSRS--RDRRHRSRSKSPGHHRSHRHRSHS---KSPERSKK 302
PSPRR R PR RSRS R RR S S S S RS S K P+R+
Sbjct: 321 PSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSS 380
Query: 303 SHKKSRR 309
+K+RR
Sbjct: 381 PPRKTRR 387
Score = 57.0 bits (136), Expect = 2e-08
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 176 QLEPRVSALEEDMDDVESSEEEEEEDE-KLERVPSPDHRRRSYRDLDKPRRSPTLRYRRS 234
+L P + + +E++ + S+ E +++E K ++ +D DK +R
Sbjct: 104 ELWPLLLSAQENIAGIPSAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRD-------- 155
Query: 235 RSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHS 294
+ + SR + RS SPRR + RS SPRR S R R RS S+SP H + RS S
Sbjct: 156 --KEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRT--KSRSPS 211
Query: 295 KSPERSKKS 303
+PE+ +K+
Sbjct: 212 PAPEKKEKT 220
Score = 52.8 bits (125), Expect = 4e-07
Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 206 RVPSPDHRRRSYRDLDKPRR-SPTLRYRRSRSRSPRRRSRSP-----KRRSPSPRRERHR 259
R PSP RRRS PRR SP ++ R S S P+RR+ SP +R SPSP +R
Sbjct: 580 RTPSPPPRRRS----PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRV 635
Query: 260 SKSPRRHRSRSRDRRHRSRSKSPGHHRSH---RHRSHSKSPERSKKSHKKSRR 309
S SP + S + RS S S H + R ++SP+ +K+ H S R
Sbjct: 636 SHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKR-HSPSPR 687
Score = 50.4 bits (119), Expect = 2e-06
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 178 EPRVSALEEDMDDVESSEE--EEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSR 235
EP V E + + S+ + + + E + P + S ++ +K + P R RS+
Sbjct: 225 EPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSR-SRSK 283
Query: 236 SRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHR--SHRHRSH 293
SRS R RSRSP P RR R RS+S R S RR R ++P RHR
Sbjct: 284 SRS-RTRSRSPSHTRPR-RRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHR-R 340
Query: 294 SKSPERSKKSHKKSRRGN 311
S+SP R ++ S G+
Sbjct: 341 SRSPVRRRRRSSASLSGS 358
Score = 50.1 bits (118), Expect = 3e-06
Identities = 39/113 (34%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Query: 208 PSPDHRRRSYRDLDKPRRSPTLR---YRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPR 264
P P RRRS PRR T RR+ S PRRRS SP+R SP +R S P+
Sbjct: 552 PPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPK 611
Query: 265 RHRSRSRDRRHRSRSKSP------GHHRSHRHRSHSKSPERSKKSHKKSRRGN 311
R + R S SP H + RS + RS K R+G+
Sbjct: 612 RRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGS 664
Score = 47.8 bits (112), Expect = 1e-05
Identities = 30/74 (40%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 234 SRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSH 293
S + + + K S R +R RS+SPRR +SRS R RS SP R R RSH
Sbjct: 143 SMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSPSPRRRS---SPV--RRERKRSH 197
Query: 294 SKSPERSKKSHKKS 307
S+SP KS S
Sbjct: 198 SRSPRHRTKSRSPS 211
Score = 47.4 bits (111), Expect = 2e-05
Identities = 47/137 (34%), Positives = 60/137 (43%), Gaps = 22/137 (16%)
Query: 191 VESSEEEEEEDEKLERVPSPDHRRRSYR-------DLDKPRRSPTLRYRRSRSRSP---R 240
VE SE EE++ K+ S RR+ R D S R +RS ++ R
Sbjct: 460 VELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGR 519
Query: 241 RRSRSPKRR-SPSPRRERHRSKSPRRHRSRSRD----RRHRSRSKSPGHHRSH------R 289
RR SP R SPSPR+ R + SPR R RS RR RS S +P R R
Sbjct: 520 RRRHSPSRSASPSPRK-RQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPR 578
Query: 290 HRSHSKSPERSKKSHKK 306
R+ S P R S ++
Sbjct: 579 RRTPSPPPRRRSPSPRR 595
Score = 47.0 bits (110), Expect = 2e-05
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 18/131 (13%)
Query: 185 EEDMDDVESSEEEEEEDEKLERVPSPD-HRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRS 243
++ D SS E+E K V + + RRR + SP R + + R RRRS
Sbjct: 490 QQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRS 549
Query: 244 RSP----KRRSPSPRRERHRSKSPRRHRSRSRDRRHRS-------RSKSPGHHRSHRHRS 292
SP +RRSPSP + PRR R+ + R R+ RS SP + R
Sbjct: 550 PSPPPTRRRRSPSP------APPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRR 603
Query: 293 HSKSPERSKKS 303
+S SP +++
Sbjct: 604 YSPSPPPKRRT 614
Score = 42.4 bits (98), Expect = 5e-04
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 23/118 (19%)
Query: 206 RVPSPDHRRRSYRDLDKPRRSPTL-RYRRSRSRSPRRR------------SRSPKRRSPS 252
R PSP RR S R PRR P R+RRSRS RRR S S + RSP
Sbjct: 313 RRPSP-RRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPP 371
Query: 253 PRRERHRSKSPRRHRSRSRD-----RRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHK 305
+ + S PR+ R S RRHR + ++ HS +P++S ++ K
Sbjct: 372 KKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTR----HSPTPQQSNRTRK 425
Score = 41.6 bits (96), Expect = 0.001
Identities = 38/115 (33%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 208 PSPDHRRRSYRDLDKPRR----SPTLRYRRSRSRSPRRRSRSP--KRRSPSPRRERHRSK 261
PSP +RR+ P+R SP + R S S P++RS SP KRRSPS + +
Sbjct: 606 PSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRS-SPVTKRRSPSLSSKHRKGS 664
Query: 262 SP----RRHRSRSRDRRH----RSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
SP R RS ++RH R R+ R S SP+R + +R
Sbjct: 665 SPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTR 719
Score = 41.2 bits (95), Expect = 0.001
Identities = 41/115 (35%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 208 PSPDHRRR-SYRDLDKPR-------RSPTLRYRRSRSRSPRR---RSRSP---KRRSPSP 253
PSP +RR S+ K R RSP+L + + SP R +RSP KR SPSP
Sbjct: 627 PSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSP 686
Query: 254 R-RERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKS 307
R R S SP R + R +S SP R R S + P++ KK+ S
Sbjct: 687 RPRAPQTSSSPPPVRRGASSSPQRRQSPSPS-TRPIRRVSRTPEPKKIKKAASPS 740
Score = 29.3 bits (64), Expect = 4.7
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 26/121 (21%)
Query: 200 EDEKLERV--PSPDHRRR--SYRDLD--------KPRRSPTLRYRRSRSRSPRRRSRSPK 247
E +K+++ PSP RR S R + KP P+ +S S + K
Sbjct: 729 EPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKK 788
Query: 248 RRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKS 307
+SP+P S SP R+ + + + + K H + +H+ H K HKK
Sbjct: 789 AKSPTP------SPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKH--------KKHKKE 834
Query: 308 R 308
+
Sbjct: 835 K 835
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 64.7 bits (156), Expect = 1e-10
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 24/144 (16%)
Query: 186 EDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPR-----RSPTLRYRRSRSRSPR 240
++ D + +E D + R PS + + R R K R RSP+ +R +SRSP
Sbjct: 481 KERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPN 540
Query: 241 RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR-----RHRSRSKSPGHHRSHRHRSHSK 295
+ + RSPS RE +S+SP + R R R R R R +S+S R H S S+
Sbjct: 541 KERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDH---SRSR 597
Query: 296 SPER-----------SKKSHKKSR 308
SP + +K+H +SR
Sbjct: 598 SPNKQSGYSRPRASSKEKAHSRSR 621
Score = 64.7 bits (156), Expect = 1e-10
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Query: 192 ESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPR-----RSPTLRYRRSRSRSPRRRSRSP 246
+S +E D + R PS + +RR R +K R RSP+ +SRSP +
Sbjct: 511 QSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRR 570
Query: 247 KRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKK-SHK 305
+ RSPS RER +S+S R SR R +S S + ++HS+S SK+ +H
Sbjct: 571 RWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHS 630
Query: 306 KSRRGNE 312
+SR ++
Sbjct: 631 QSRTSSK 637
Score = 63.9 bits (154), Expect = 2e-10
Identities = 49/145 (33%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPR---RSPT 228
+E R S+ E D S +E + DH R + + R RSP
Sbjct: 361 KERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPY 420
Query: 229 LRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR-----RHRSRSKSPG 283
RSRSRSP + + RSP R+R RS+SP + R SR R R RSRS+SP
Sbjct: 421 KARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPS 480
Query: 284 HHRSHRHRSHSKSPERSKKSHKKSR 308
R H S SP + ++ H++SR
Sbjct: 481 KERDH---SQLGSPSK-ERDHRRSR 501
Score = 59.7 bits (143), Expect = 3e-09
Identities = 48/131 (36%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 189 DDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPR-----RSPTLRYRRSRSRSPRRRS 243
D S + D R P R R +K R RSP RSRSRSP +
Sbjct: 400 DHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKAR 459
Query: 244 RSPKRRSPSPRRERHRSKSPRRHR------SRSRDRRHRSRSKSPGHHRSHRHRSHSKSP 297
+ RSP+ R+R RS+SP + R S S++R HR RS+SP R R +S S S
Sbjct: 460 DHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHR-RSRSPSKERQCR-QSRSSSK 517
Query: 298 ERSKKSHKKSR 308
ER H++SR
Sbjct: 518 ER---DHRRSR 525
Score = 59.3 bits (142), Expect = 4e-09
Identities = 48/123 (39%), Positives = 62/123 (50%), Gaps = 30/123 (24%)
Query: 214 RRSYRDLDKPR-RSPTLRYRRSRSRSP-----RRRSRSPKRR-------SPSPRRERHRS 260
R Y+ D+ R RSP SRSRSP R RSRSP + SPS R+ RS
Sbjct: 441 RSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRS 500
Query: 261 KSP------RRHRSRSRDRRHRSRSKSPGHHRSHRH---------RSHSKSPERSKKSHK 305
+SP R+ RS S++R HR RS+SP R R RS S+SP ++ H+
Sbjct: 501 RSPSKERQCRQSRSSSKERDHR-RSRSPSKERQRRQSRSPNKERDRSQSRSPS-EEREHR 558
Query: 306 KSR 308
+SR
Sbjct: 559 QSR 561
Score = 58.5 bits (140), Expect = 7e-09
Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 11/134 (8%)
Query: 189 DDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRR-----SPTLRYRRSRSRSPRRRS 243
D S + D R P+ R R K R SP+ RSRSP +
Sbjct: 448 DRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKER 507
Query: 244 RSPKRRSPSPRRERHRSKSPRRHRSRSRDR-----RHRSRSKSPGHHRSHRHRSHSKSPE 298
+ + RS S R+ RS+SP + R R + R R RS+S+SP R HR +S S S E
Sbjct: 508 QCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHR-QSRSPSKE 566
Query: 299 RSKKSHKKSRRGNE 312
R ++ + + E
Sbjct: 567 RDRRRWRSPSKERE 580
Score = 57.0 bits (136), Expect = 2e-08
Identities = 46/137 (33%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 189 DDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKR 248
D S +E D PS + R R K R+ R+SRS S R R +
Sbjct: 472 DRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQC-----RQSRSSSKERDHR--RS 524
Query: 249 RSPSPRRERHRSKSPRRHRSRSRDR-----RHRSRSKSPGHHRSHRH-RSHSKSPER--- 299
RSPS R+R +S+SP + R RS+ R R +S+SP R R RS SK ER
Sbjct: 525 RSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQS 584
Query: 300 ----SKKSHKKSRRGNE 312
++ H +SR N+
Sbjct: 585 RSSSEERDHSRSRSPNK 601
Score = 50.1 bits (118), Expect = 3e-06
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 8/134 (5%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPR-----RS 226
+E ++ + R E D S EE E + R PS + RR +R K R RS
Sbjct: 529 KERQRRQSRSPNKERDRSQSRSPSEERE--HRQSRSPSKERDRRRWRSPSKERERRQSRS 586
Query: 227 PTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHR 286
+ SRSRSP ++S + R+ S + RS++P + + S+ R S+ P
Sbjct: 587 SSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSRT-SSKESDPSQST 645
Query: 287 SHRHRSHSKSPERS 300
R +SP R+
Sbjct: 646 VPRSPDWKRSPTRT 659
Score = 48.9 bits (115), Expect = 6e-06
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 209 SPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRER--HRSKSPRRH 266
S H R S ++ D R S + R RS+S + RS SP + R RS+SP +
Sbjct: 364 SHSHSRSSSKERDH-RGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKA 422
Query: 267 RSRSRDR-----RHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312
R RSR R R SRS+SP R RS S+SP ++ + H +SR N+
Sbjct: 423 RDRSRSRSPNKARDCSRSRSP---YKARDRSRSRSPNKA-RDHSRSRSPNK 469
Score = 45.1 bits (105), Expect = 8e-05
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 185 EEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSR-SPRRRS 243
+E D+ S + + +PS R +SY + R + +RSR +S
Sbjct: 228 KEKSDNPSPSSSRKVKSYGQMIIPS---REKSYSPTEMSSRVKSYNQASTRSRPQSHSQS 284
Query: 244 RSPKR-RSPSPRR--ERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERS 300
RSP+R RS S +R R RS S +R+ SR+R R + G H R S KS +S
Sbjct: 285 RSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQS 344
Query: 301 K-----KSHKKSR 308
+ +SH SR
Sbjct: 345 RTPRRGRSHNWSR 357
Score = 43.5 bits (101), Expect = 2e-04
Identities = 37/113 (32%), Positives = 51/113 (45%), Gaps = 11/113 (9%)
Query: 208 PSPDHRRRSYRDLDKPRRSPTLRYR-RSRSRSPRRRSRSPKRRSPSP--------RRERH 258
PS +S P P+ R R RS++R+P R S + S RR H
Sbjct: 59 PSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRGTH 118
Query: 259 -RSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRG 310
R ++P R SRS +R SR+ +PG R+H R S R+ S +K RG
Sbjct: 119 SRGRTPGRRGSRS-SKRSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRG 170
Score = 43.5 bits (101), Expect = 2e-04
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 225 RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKS--PRRHRSRSRDR-----RHRS 277
R+P+ S SRS + R S SPR+E RS+S P + R SR R R RS
Sbjct: 357 RNPSKERSHSHSRSSSKER--DHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRS 414
Query: 278 RSKSPGHHRSHRHRSHSKSPERSK 301
RS+SP R RS S+SP +++
Sbjct: 415 RSRSP---YKARDRSRSRSPNKAR 435
Score = 42.7 bits (99), Expect = 4e-04
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 215 RSYRDLDKPRRSPTLRYRRSR--SRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRD 272
RS+ +S T R RS SR+P + RS S R+ S SPR+ RS+
Sbjct: 333 RSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQS 392
Query: 273 -----RRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312
+R SRS+SP R RS S+SP ++ + +SR N+
Sbjct: 393 GSPNKQRDHSRSRSP---NKARDRSRSRSPYKA-RDRSRSRSPNK 433
Score = 42.4 bits (98), Expect = 5e-04
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 31/173 (17%)
Query: 160 IILPRLQKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRD 219
+I+P +K Y ++ RV + + S + + R S +R R
Sbjct: 248 MIIPSREKSY---SPTEMSSRVKSYNQA--STRSRPQSHSQSRSPRRSRSGSQKRTHSRV 302
Query: 220 LDKPRRSPTLRYRRSRSRSPRRRS------RSPKRRSPSPRRERHRSKSPRRHRSRSRDR 273
RS + + SR+RS R+ R + RS S + +++S++PRR RS + R
Sbjct: 303 -----RSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSR 357
Query: 274 -----RHRSRSKSPGHHRSHR---------HRSHSKSPERSKKSHKKSRRGNE 312
R S S+S R HR RS S SP + ++ H +SR N+
Sbjct: 358 NPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNK-QRDHSRSRSPNK 409
Score = 31.2 bits (69), Expect = 1.2
Identities = 20/83 (24%), Positives = 33/83 (39%)
Query: 225 RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGH 284
R+ + S+S R+P R S R R ++++P R + +R + S H
Sbjct: 53 RNSVMSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCH 112
Query: 285 HRSHRHRSHSKSPERSKKSHKKS 307
R H R +S K+S
Sbjct: 113 QRRGTHSRGRTPGRRGSRSSKRS 135
>gi|41393554 LUC7-like isoform b [Homo sapiens]
Length = 371
Score = 64.3 bits (155), Expect = 1e-10
Identities = 60/192 (31%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 126 DYRKIKSQNRNGEFEL---MHVDEFIDELLHSERVCDIILPRL-----QKRYVLEEAEQL 177
+ K++++ + E E M F + L RVC++ L +R +L
Sbjct: 158 EVEKVRAKKKEAEEEYRNSMPASSFQQQKL---RVCEVCSAYLGLHDNDRRLADHFGGKL 214
Query: 178 EPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSR 237
+ E +D + + E++E +R+ + R R R L + S T RRSRSR
Sbjct: 215 HLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREER-LSRRSGSRTRDRRRSRSR 273
Query: 238 SPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSK--SPGHHRSHRHRSHSK 295
RR RRS S RER + R RSR R RRHRSRS+ S GH R+ R RS
Sbjct: 274 DRRR------RRSRSTSRERRKLS---RSRSRDRHRRHRSRSRSHSRGHRRASRDRSAKY 324
Query: 296 SPERSKKSHKKS 307
R + S ++S
Sbjct: 325 KFSRERASREES 336
Score = 61.2 bits (147), Expect = 1e-09
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 211 DHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRS 270
D R++ + + R LR R R R R RS R + RR R R + RR RS S
Sbjct: 226 DQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSR-TRDRRRSRSRDRRRRRSRSTS 284
Query: 271 RDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRR 309
R+RR SRS+S HR HR RS S S + S +S +
Sbjct: 285 RERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
Score = 52.8 bits (125), Expect = 4e-07
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Query: 170 VLEEAEQLEPRVSALEEDMD-DVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPT 228
+ E+ +QL V+ +E + D EE E +E+L R R R D+ RRS +
Sbjct: 221 IREKLDQLRKTVAEKQEKRNQDRLRRREEREREERLSR-------RSGSRTRDR-RRSRS 272
Query: 229 LRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSH 288
RR RSRS R R R R RHRS+S RS SR R SR +S + S
Sbjct: 273 RDRRRRRSRSTSRERRKLSRSRSRDRHRRHRSRS----RSHSRGHRRASRDRSAKYKFSR 328
Query: 289 RHRSHSKSPERSK 301
S +S E +
Sbjct: 329 ERASREESWESGR 341
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 63.5 bits (153), Expect = 2e-10
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 23/149 (15%)
Query: 182 SALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDK----------PRRSPTLRY 231
+++ ++++D ES EEE+EDE L + + DL K + + R
Sbjct: 142 ASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRR 201
Query: 232 RRSRSRSPRRRSRSPKRRSPSPRRERHRSKS------------PRRHRSRSRDRRHRSRS 279
RS+SRS RS S + SPS R R RS+S R RSRSR + RS S
Sbjct: 202 SRSKSRSSHSRSSS-RSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSS 260
Query: 280 KSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
+S S R RS+S S +++ K+SR
Sbjct: 261 RSHRGSSSPRKRSYSSSSSSPERNRKRSR 289
Score = 58.9 bits (141), Expect = 6e-09
Identities = 55/151 (36%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSE------EEEEEDEKLERVPSPDHRRRSYRDLDKPRR 225
+E E L +ED DD + S+ EEE+ ++K S R S+
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSS 218
Query: 226 SPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSK------SPRRHRSRS--RDRRHRS 277
SP+ RSRSRS R S S + RS S RER RS+ S R HR S R R + S
Sbjct: 219 SPSSSRSRSRSRS--RSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSS 276
Query: 278 RSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
S SP +R R RS S S KK +SR
Sbjct: 277 SSSSPERNRK-RSRSRSSSSGDRKKRRTRSR 306
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 63.5 bits (153), Expect = 2e-10
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 23/149 (15%)
Query: 182 SALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDK----------PRRSPTLRY 231
+++ ++++D ES EEE+EDE L + + DL K + + R
Sbjct: 142 ASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRR 201
Query: 232 RRSRSRSPRRRSRSPKRRSPSPRRERHRSKS------------PRRHRSRSRDRRHRSRS 279
RS+SRS RS S + SPS R R RS+S R RSRSR + RS S
Sbjct: 202 SRSKSRSSHSRSSS-RSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSS 260
Query: 280 KSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
+S S R RS+S S +++ K+SR
Sbjct: 261 RSHRGSSSPRKRSYSSSSSSPERNRKRSR 289
Score = 58.9 bits (141), Expect = 6e-09
Identities = 55/151 (36%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSE------EEEEEDEKLERVPSPDHRRRSYRDLDKPRR 225
+E E L +ED DD + S+ EEE+ ++K S R S+
Sbjct: 159 DEDEDLSKYKLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSS 218
Query: 226 SPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSK------SPRRHRSRS--RDRRHRS 277
SP+ RSRSRS R S S + RS S RER RS+ S R HR S R R + S
Sbjct: 219 SPSSSRSRSRSRS--RSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSS 276
Query: 278 RSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
S SP +R R RS S S KK +SR
Sbjct: 277 SSSSPERNRK-RSRSRSSSSGDRKKRRTRSR 306
>gi|24307919 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Homo
sapiens]
Length = 155
Score = 62.8 bits (151), Expect = 4e-10
Identities = 41/80 (51%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 233 RSRSRSPRR---RSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHR 289
RSRSRSPRR RSRS R RRER RS+ R RSRSR HR RS+SP R
Sbjct: 3 RSRSRSPRRERRRSRSTSRERERRRRERSRSRERDRRRSRSRS-PHRRRSRSP-----RR 56
Query: 290 HRSHSKSPERSKKSHKKSRR 309
HRS S SP R K+ + ++
Sbjct: 57 HRSTSPSPSRLKERRDEEKK 76
Score = 57.4 bits (137), Expect = 2e-08
Identities = 36/82 (43%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 225 RSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRD-RRHRSRSKSPG 283
RSP RRSRS S R R R + RS S R+R RS+S HR RSR RRHRS S SP
Sbjct: 7 RSPRRERRRSRSTS-RERERRRRERSRSRERDRRRSRSRSPHRRRSRSPRRHRSTSPSPS 65
Query: 284 HHRSHRHRSHSKSPERSKKSHK 305
+ R ++ E K +
Sbjct: 66 RLKERRDEEKKETKETKSKERQ 87
Score = 46.6 bits (109), Expect = 3e-05
Identities = 36/101 (35%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 206 RVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRR 265
R SP RR R + R R RR RSRS R R + RSP R RS+SPRR
Sbjct: 5 RSRSPRRERRRSRSTSRERE----RRRRERSRSRERDRRRSRSRSP----HRRRSRSPRR 56
Query: 266 HRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKK 306
H RS SP R R K + KS ++
Sbjct: 57 H-----------RSTSPSPSRLKERRDEEKKETKETKSKER 86
Score = 37.0 bits (84), Expect = 0.023
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 194 SEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR-RSRSPKRRSPS 252
S E E + ER S + RR R RSP R RSRSPRR RS SP SPS
Sbjct: 18 STSRERERRRRERSRSRERDRRRSRS-----RSP----HRRRSRSPRRHRSTSP---SPS 65
Query: 253 PRRERHRSKSPRRHRSRSRDRR 274
+ER + ++S++R+
Sbjct: 66 RLKERRDEEKKETKETKSKERQ 87
>gi|89276756 serine/threonine-protein kinase PRP4K [Homo sapiens]
Length = 1007
Score = 62.8 bits (151), Expect = 4e-10
Identities = 51/103 (49%), Positives = 58/103 (56%), Gaps = 16/103 (15%)
Query: 194 SEEEEEEDEKLERVPSPDHRRR----SYRDLDKP-----RRSPTLRYRRS----RSRSPR 240
S E + + + R+ SP R R S R+ K R SPT R RS RSRSP
Sbjct: 396 SLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPIRRRSRSPL 455
Query: 241 RRSRSPKRRSPSPRR--ERHRSKSPRRHRSRSR-DRRHRSRSK 280
RRSRSP+RRS SPRR RS+S R RSRSR RR RSRSK
Sbjct: 456 RRSRSPRRRSRSPRRRDRGRRSRSRLRRRSRSRGGRRRRSRSK 498
Score = 56.2 bits (134), Expect = 4e-08
Identities = 51/113 (45%), Positives = 57/113 (50%), Gaps = 18/113 (15%)
Query: 200 EDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSP-------RRRSRSP-KRRSP 251
+ LER RRR +PR R RS+ SP RRRSRSP +RRS
Sbjct: 393 KSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPIRRRSR 452
Query: 252 SPRRERHRSKSPRRHRSRS---RDRRHRSRSKSPGHHRS---HRHRSHSKSPE 298
SP R RS+SPRR RSRS RDR RSRS+ RS R RS SK E
Sbjct: 453 SPLR---RSRSPRR-RSRSPRRRDRGRRSRSRLRRRSRSRGGRRRRSRSKVKE 501
Score = 55.5 bits (132), Expect = 6e-08
Identities = 50/145 (34%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 190 DVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRS--PTLRYRRSRSRSPRRRSRSPK 247
D S +E + R SP R S + DK RRS P L RRS+ R+ SP
Sbjct: 332 DASSGKENRSPSRRPGR--SPKRRSLSPKPRDKSRRSRSPLLNDRRSKQSKSPSRTLSPG 389
Query: 248 RRSPSPRRERHRSKSPRRH----RSRSRD----RRHRS--------------RSKSPGHH 285
RR+ S ER R + RR R+R RD RR RS RS+SP
Sbjct: 390 RRAKSRSLERKRREPERRRLSSPRTRPRDDILSRRERSKDASPINRWSPTRRRSRSPIRR 449
Query: 286 RSHRHRSHSKSPERSKKSHKKSRRG 310
RS S+SP R +S ++ RG
Sbjct: 450 RSRSPLRRSRSPRRRSRSPRRRDRG 474
Score = 53.9 bits (128), Expect = 2e-07
Identities = 40/85 (47%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 189 DDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYR--RSRSRSPRRRSRSP 246
DD+ S E ++ + R SP RRRS + + RSP R R R RSRSPRRR R
Sbjct: 418 DDILSRRERSKDASPINRW-SPT-RRRSRSPIRRRSRSPLRRSRSPRRRSRSPRRRDRG- 474
Query: 247 KRRSPSPRRERHRSKSPRRHRSRSR 271
RRS S R R RS+ RR RSRS+
Sbjct: 475 -RRSRSRLRRRSRSRGGRRRRSRSK 498
Score = 52.0 bits (123), Expect = 7e-07
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 192 ESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP 251
E + E D++ + + SP S K RSP+ R RSP+RRS SPK
Sbjct: 311 ERKSKRSETDKEKKPIKSPSKDASS----GKENRSPSRR----PGRSPKRRSLSPK---- 358
Query: 252 SPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHS-KSPERSKKSHKKSR 308
PR + RS+SP + RS+ + SR+ SPG R + PER + S ++R
Sbjct: 359 -PRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSRSLERKRREPERRRLSSPRTR 415
Score = 49.7 bits (117), Expect = 3e-06
Identities = 34/117 (29%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 192 ESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP 251
E + + ++ K + PS +R +D + +SPTLR R R K +
Sbjct: 210 EKTTRSKSKERKKSKSPS---KRSKSQDQARKSKSPTLRRRSQEKIGKARSPTDDKVKIE 266
Query: 252 SPRRERHRSKSPRRHRSRSRDRRHRSRSKSP--GHHRSHRHRSHSKSPERSKKSHKK 306
+ + R KSP + SRSRDR +SRS G + R RS + +RS+ +K
Sbjct: 267 DKSKSKDRKKSPIINESRSRDRGKKSRSPVDLRGKSKDRRSRSKERKSKRSETDKEK 323
Score = 49.7 bits (117), Expect = 3e-06
Identities = 29/117 (24%), Positives = 52/117 (44%)
Query: 192 ESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP 251
+S + + ++ + SP RRRS + K R + + + R +SP
Sbjct: 224 KSPSKRSKSQDQARKSKSPTLRRRSQEKIGKARSPTDDKVKIEDKSKSKDRKKSPIINES 283
Query: 252 SPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
R +S+SP R +S+DRR RS+ + + + + KSP + S K++R
Sbjct: 284 RSRDRGKKSRSPVDLRGKSKDRRSRSKERKSKRSETDKEKKPIKSPSKDASSGKENR 340
Score = 43.5 bits (101), Expect = 2e-04
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 198 EEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRER 257
E++ + +R SP RD K RSP R +S+ R RS+ K + +E+
Sbjct: 266 EDKSKSKDRKKSPIINESRSRDRGKKSRSPV--DLRGKSKDRRSRSKERKSKRSETDKEK 323
Query: 258 HRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSP-ERSKKS 303
KSP + S ++ +RS S+ PG RS + RS S P ++S++S
Sbjct: 324 KPIKSPSKDASSGKE--NRSPSRRPG--RSPKRRSLSPKPRDKSRRS 366
Score = 37.4 bits (85), Expect = 0.017
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 21/157 (13%)
Query: 161 ILPRLQKRYVLEEAEQ----LEPRV-SALEEDMDDVES-SEEEEEEDEKLERVPSPDHRR 214
+L L+K+ L +AE +E +V S + + ES SEEE E EK R
Sbjct: 105 LLEDLEKQRALIKAELDNELMEGKVQSGMGLILQGYESGSEEEGEIHEKARNGNRSSTRS 164
Query: 215 RSYRDLDKPRRSPTLRYRRSRSRSPRR-RSRSPKRRSPSP----RRERHRSKSPRRHRSR 269
S + + + +RS+SRS R R RS K++S + + RSKS R +S+
Sbjct: 165 SSTKGKLELVDNKITTKKRSKSRSKERTRHRSDKKKSKGGIEIVKEKTTRSKSKERKKSK 224
Query: 270 SRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKK 306
S +R +S+ ++ SKSP ++S +K
Sbjct: 225 SPSKRSKSQDQA----------RKSKSPTLRRRSQEK 251
Score = 33.5 bits (75), Expect = 0.25
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 233 RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRS 292
+S P + ++ E +S +H SR + ++H+ RSK H+ H+H S
Sbjct: 7 QSLREQPEMEDANSEKSINEENGEVSEDQSQNKH-SRHKKKKHKHRSK----HKKHKHSS 61
Query: 293 HSKSPERSKKSHKKSR 308
++ K HK +
Sbjct: 62 EEDKDKKHKHKHKHKK 77
Score = 32.7 bits (73), Expect = 0.42
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 247 KRRSPSPRRERHRSKSPRRHRSRS----RDRRHRSRSKSPGHHRSHRHRSHSKSPERSKK 302
K+RS S +ER R +S ++ +++ RS+SK +S RS S+ R K
Sbjct: 181 KKRSKSRSKERTRHRSDKKKSKGGIEIVKEKTTRSKSKERKKSKSPSKRSKSQDQARKSK 240
Query: 303 SHKKSRRGNE 312
S RR E
Sbjct: 241 SPTLRRRSQE 250
Score = 32.3 bits (72), Expect = 0.55
Identities = 12/49 (24%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 250 SPSPRRERHRSKSPRRHRSRSRDRRHRSRS---KSPGHHRSHRHRSHSK 295
S + +H ++H+ RS+ ++H+ S K H H+H+ H +
Sbjct: 32 SEDQSQNKHSRHKKKKHKHRSKHKKHKHSSEEDKDKKHKHKHKHKKHKR 80
Score = 28.5 bits (62), Expect = 8.0
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 233 RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRS 292
R+ +RS R S + + + + +S R + R+R R + +SK G +
Sbjct: 155 RNGNRSSTRSSSTKGKLELVDNKITTKKRSKSRSKERTRHRSDKKKSKG-GIEIVKEKTT 213
Query: 293 HSKSPERSKKSHKKSRR 309
SKS ER KKS S+R
Sbjct: 214 RSKSKER-KKSKSPSKR 229
>gi|8922297 LUC7-like isoform a [Homo sapiens]
Length = 325
Score = 62.0 bits (149), Expect = 7e-10
Identities = 55/179 (30%), Positives = 79/179 (44%), Gaps = 23/179 (12%)
Query: 126 DYRKIKSQNRNGEFEL---MHVDEFIDELLHSERVCDIILPRL-----QKRYVLEEAEQL 177
+ K++++ + E E M F + L RVC++ L +R +L
Sbjct: 158 EVEKVRAKKKEAEEEYRNSMPASSFQQQKL---RVCEVCSAYLGLHDNDRRLADHFGGKL 214
Query: 178 EPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSR 237
+ E +D + + E++E +R+ + R R R L + S T RRSRSR
Sbjct: 215 HLGFIQIREKLDQLRKTVAEKQEKRNQDRLRRREEREREER-LSRRSGSRTRDRRRSRSR 273
Query: 238 SPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKS 296
RRR RS S RER + RSRSRDR R RS+S H R HR S +S
Sbjct: 274 DRRRR------RSRSTSRERRKLS-----RSRSRDRHRRHRSRSRSHSRGHRRASRDRS 321
Score = 61.2 bits (147), Expect = 1e-09
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 211 DHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRS 270
D R++ + + R LR R R R R RS R + RR R R + RR RS S
Sbjct: 226 DQLRKTVAEKQEKRNQDRLRRREEREREERLSRRSGSR-TRDRRRSRSRDRRRRRSRSTS 284
Query: 271 RDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRR 309
R+RR SRS+S HR HR RS S S + S +S +
Sbjct: 285 RERRKLSRSRSRDRHRRHRSRSRSHSRGHRRASRDRSAK 323
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 62.0 bits (149), Expect = 7e-10
Identities = 51/119 (42%), Positives = 61/119 (51%), Gaps = 16/119 (13%)
Query: 202 EKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRS----RSRSPRRRS-RSPKRRSP-SPRR 255
++ R PS +RR + ++ RSP+ R RS R RSP +RS R P RS SP
Sbjct: 1635 QRSHRGPS---QRRHHSPSERSHRSPSERSHRSSSERRHRSPSQRSHRGPSERSHCSPSE 1691
Query: 256 ERHRSKSPRRHRSRSRDRRHRSRSK----SPGH--HRSHRHRSHSKSPERSKKSHKKSR 308
RHRS S R HR S +RRH S SK SP HRS RSH ERS S + R
Sbjct: 1692 RRHRSPSQRSHRGPS-ERRHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSPSERR 1749
Score = 55.8 bits (133), Expect = 5e-08
Identities = 46/128 (35%), Positives = 55/128 (42%), Gaps = 17/128 (13%)
Query: 194 SEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSP-KRRSPS 252
S E ER RR + ++ SP+ RS RR RSP +RR S
Sbjct: 1728 SPSERSHHSPSERSHHSPSERRHHSPSERSHCSPS---ERSHCSPSERRHRSPSERRHHS 1784
Query: 253 PRRERHRSKSPRRHRSRSRDRRH----RSR-------SKSPGHHRSHR--HRSHSKSPER 299
P + H S S R H S S RRH RSR +SP RSHR RSH + ER
Sbjct: 1785 PSEKSHHSPSERSHHSPSERRRHSPLERSRHSLLERSHRSPSERRSHRSFERSHRRISER 1844
Query: 300 SKKSHKKS 307
S +KS
Sbjct: 1845 SHSPSEKS 1852
Score = 53.1 bits (126), Expect = 3e-07
Identities = 46/122 (37%), Positives = 50/122 (40%), Gaps = 12/122 (9%)
Query: 193 SSEEEEEEDEKLERVPSP-DHRRRSYRDLDKP----RRSPTLRYRRSRSRSPRRRSRSPK 247
S E+ R PS HR S R P RSP+ R R S RR SP
Sbjct: 1658 SERSHRSSSERRHRSPSQRSHRGPSERSHCSPSERRHRSPSQRSHRGPSE---RRHHSPS 1714
Query: 248 RRS-PSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKK 306
+RS SP R HRS S R H S S H S S H S RSH ERS S +
Sbjct: 1715 KRSHRSPARRSHRSPSERSHHSPSERSHH---SPSERRHHSPSERSHCSPSERSHCSPSE 1771
Query: 307 SR 308
R
Sbjct: 1772 RR 1773
Score = 51.6 bits (122), Expect = 9e-07
Identities = 46/121 (38%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 202 EKLERVPSP-DHR----RRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRS-PSPRR 255
E+ R PS HR RR + + RSP R RS S R SP RS SP
Sbjct: 1691 ERRHRSPSQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSE---RSHHSPSERSHHSPSE 1747
Query: 256 ERHRSKSPRRHRSRSR-------DRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
RH S S R H S S +RRHRS S+ H S +SH ERS S + R
Sbjct: 1748 RRHHSPSERSHCSPSERSHCSPSERRHRSPSER--RHHSPSEKSHHSPSERSHHSPSERR 1805
Query: 309 R 309
R
Sbjct: 1806 R 1806
Score = 50.1 bits (118), Expect = 3e-06
Identities = 54/143 (37%), Positives = 65/143 (45%), Gaps = 27/143 (18%)
Query: 193 SSEEEEEEDEKLERVPSP-DHR---RRSYRD-LDKPRRSPTLRYRRS----RSRSPRRRS 243
S E+ PS HR RRS+R ++ SP+ R S R SP RS
Sbjct: 1698 SQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSPSERRHHSPSERS 1757
Query: 244 R-SPKRRSP-SPRRERHRSKSPRRHRSRSRDRRHRSRSK----SPGHHRSH------RH- 290
SP RS SP RHRS S RRH S S ++ H S S+ SP R H RH
Sbjct: 1758 HCSPSERSHCSPSERRHRSPSERRHHSPS-EKSHHSPSERSHHSPSERRRHSPLERSRHS 1816
Query: 291 ---RSH-SKSPERSKKSHKKSRR 309
RSH S S RS +S ++S R
Sbjct: 1817 LLERSHRSPSERRSHRSFERSHR 1839
Score = 49.7 bits (117), Expect = 3e-06
Identities = 38/90 (42%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 223 PRRS-PTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKS 281
P RS +L R S S R +RR SP HRS S R HRS S +RRHRS S+
Sbjct: 1618 PERSCHSLSERGLHSPSQRSHRGPSQRRHHSPSERSHRSPSERSHRS-SSERRHRSPSQR 1676
Query: 282 PGHHRSHRHRSH-SKSPERSKKSHKKSRRG 310
HR RSH S S R + ++S RG
Sbjct: 1677 --SHRGPSERSHCSPSERRHRSPSQRSHRG 1704
Score = 48.5 bits (114), Expect = 7e-06
Identities = 50/131 (38%), Positives = 58/131 (44%), Gaps = 32/131 (24%)
Query: 206 RVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSR----SPRRRS-RSPKRR---SP------ 251
R PS +R S L++ SP+ R S SR SP RS RSP +R SP
Sbjct: 1567 RSPSERSQRSS---LERRHHSPSQRSHCSPSRKNHSSPSERSWRSPSQRNHCSPPERSCH 1623
Query: 252 --------SPRRERHRSKSPRRHRSRSRDRRHRS------RSKSPGHHRSHRHRSHSKSP 297
SP + HR S RRH S S +R HRS RS S HRS RSH
Sbjct: 1624 SLSERGLHSPSQRSHRGPSQRRHHSPS-ERSHRSPSERSHRSSSERRHRSPSQRSHRGPS 1682
Query: 298 ERSKKSHKKSR 308
ERS S + R
Sbjct: 1683 ERSHCSPSERR 1693
Score = 48.5 bits (114), Expect = 7e-06
Identities = 46/133 (34%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 193 SSEEEEEEDEKLERVPSPDHR----RRSYRDL-DKPRRSPTLRYRRSRSRSPRRRSRSPK 247
S + E+ R PS + RS L ++ SP+ R R S+
Sbjct: 1594 SRKNHSSPSERSWRSPSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHSPSERS 1653
Query: 248 RRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSK------SPGHHRSHRHRSHSKSPER-- 299
RSPS R HRS S RRHRS S+ R HR S+ S HRS RSH ER
Sbjct: 1654 HRSPSER--SHRSSSERRHRSPSQ-RSHRGPSERSHCSPSERRHRSPSQRSHRGPSERRH 1710
Query: 300 ---SKKSHKKSRR 309
SK+SH+ R
Sbjct: 1711 HSPSKRSHRSPAR 1723
Score = 46.6 bits (109), Expect = 3e-05
Identities = 43/122 (35%), Positives = 53/122 (43%), Gaps = 9/122 (7%)
Query: 194 SEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRS--RSPRRRSRSPKR--- 248
S E+ ER RR + L++ R S R RS S RS R RS +R
Sbjct: 1784 SPSEKSHHSPSERSHHSPSERRRHSPLERSRHSLLERSHRSPSERRSHRSFERSHRRISE 1843
Query: 249 RSPSPRRERHRSKSPRRHRSRSRDRRHRSRSK---SPGHHRSHRHRSHSKSPERSKKSHK 305
RS SP + H S R S S R H S K SP RSHR S + S++SH+
Sbjct: 1844 RSHSPSEKSHLSPLERSRCSPSERRGHSSSGKTCHSPSE-RSHRSPSGMRQGRTSERSHR 1902
Query: 306 KS 307
S
Sbjct: 1903 SS 1904
Score = 43.9 bits (102), Expect = 2e-04
Identities = 40/134 (29%), Positives = 52/134 (38%), Gaps = 8/134 (5%)
Query: 180 RVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSR-SRS 238
R S LE + + + R HRR S R +S RSR S S
Sbjct: 1806 RHSPLERSRHSLLERSHRSPSERRSHRSFERSHRRISERSHSPSEKSHLSPLERSRCSPS 1865
Query: 239 PRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRH------RS 292
RR S + SP HRS S R + R+ +R HRS + H S R+
Sbjct: 1866 ERRGHSSSGKTCHSPSERSHRSPSGMR-QGRTSERSHRSSCERTRHSPSEMRPGRPSGRN 1924
Query: 293 HSKSPERSKKSHKK 306
H ERS++S K
Sbjct: 1925 HCSPSERSRRSPLK 1938
Score = 42.4 bits (98), Expect = 5e-04
Identities = 35/87 (40%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 225 RSPTLRYRRSRSRSPRRRSRSPKRRSP-SPRRERHRSKSPRRHRSRSRDRRHRSRSKSPG 283
R+P R+R R RSP RS S RH S S R H S SR + H S S+
Sbjct: 1548 RTPRGPSERTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSR-KNHSSPSER-- 1604
Query: 284 HHRSHRHRSHSKSPERSKKSHKKSRRG 310
RS R+H PERS H S RG
Sbjct: 1605 SWRSPSQRNHCSPPERS--CHSLSERG 1629
Score = 34.3 bits (77), Expect = 0.15
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 242 RSRSPKRRSPSPRR------ERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSK 295
R R+P R PS R HRS S R RS S +RRH S S+ H S ++HS
Sbjct: 1546 RERTP--RGPSERTRHNPSWRNHRSPSERSQRS-SLERRHHSPSQR--SHCSPSRKNHSS 1600
Query: 296 SPERSKKS 303
ERS +S
Sbjct: 1601 PSERSWRS 1608
Score = 32.7 bits (73), Expect = 0.42
Identities = 32/97 (32%), Positives = 37/97 (38%), Gaps = 19/97 (19%)
Query: 212 HRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSR 271
HR + K P+ YR R P R+R +P HRS S R RS S
Sbjct: 1527 HRHLKDKLTHKEHNHPSF-YRERTPRGPSERTRH------NPSWRNHRSPSERSQRS-SL 1578
Query: 272 DRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
+RRH S S RSH SP R S R
Sbjct: 1579 ERRHHSPS----------QRSHC-SPSRKNHSSPSER 1604
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 62.0 bits (149), Expect = 7e-10
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRY 231
+E ++ R E+D D + E+++E++ + +R D +R+ DK R+P Y
Sbjct: 429 KEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKK----DKKSRTPPRSY 484
Query: 232 ---RRSRSRSPRRRSRSPKRRSPSPRRERH-RSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
RRSRS S RR R + S SPR + + KS R RSR+++ + R K H
Sbjct: 485 NASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISE 544
Query: 288 HRHRSHSKSPERS 300
R R S S +S
Sbjct: 545 RRERERSTSMRKS 557
Score = 58.5 bits (140), Expect = 7e-09
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 163 PRLQKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDK 222
P + + +E E++ RV + + E + + K R S H R R K
Sbjct: 264 PEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGR--SRSHTRSKSRSSSK 321
Query: 223 P--RRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSR--SRDRRHRSR 278
RR + RSRS + R + +RRS SP ++R +S+ R+ RSR SRD+R +R
Sbjct: 322 SHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTR 381
Query: 279 SKSPGHHRSHRHRSHSKSPERSKKSHKKSRRG 310
K R + + K ER K+ K+ RG
Sbjct: 382 EKIKEKERV-KEKDREKEREREKEREKEKERG 412
Score = 55.5 bits (132), Expect = 6e-08
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 225 RSPTLRYRRSRSRSPRRRSRSPKR-------RSPSPRRERHRSKSPRRHRSRSRDRRHRS 277
RS T RS S+S RR RS + RS S +++R RSKSP + RS+SR+RR +S
Sbjct: 309 RSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERR-KS 367
Query: 278 RSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312
RS+S + R K ER K+ ++ R E
Sbjct: 368 RSRSHSRDKRKDTREKIKEKERVKEKDREKERERE 402
Score = 53.9 bits (128), Expect = 2e-07
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 23/134 (17%)
Query: 185 EEDMDDVESSEEEEEEDEKLERVP------------SPDHRRRSYRDLDK-PRRSPTLRY 231
E + D + +E+ ++D+K P S + RRR R + PR S T++
Sbjct: 458 EREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKR 517
Query: 232 RRSRSRSPRRRSRSPKRRSP-----SPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHR 286
+ SRS SPR R++ K+R S RRER RS S R+ S RD + + S
Sbjct: 518 KSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRK-SSNDRDGKEKLEKNS----T 572
Query: 287 SHRHRSHSKSPERS 300
S + + H+K P+ S
Sbjct: 573 SLKEKEHNKEPDSS 586
Score = 50.1 bits (118), Expect = 3e-06
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 185 EEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSR 244
E+D + E E+E ++ ++ + + R+ D+ + R + +SR+P R
Sbjct: 426 EKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYN 485
Query: 245 SPKR-RSPSPRRERHRSKSPRRH-RSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKK 302
+ +R RS S R R RS+S R R+ +R SRS SP RS + + ER
Sbjct: 486 ASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSP---RSRNKKDKKREKERDHI 542
Query: 303 SHKKSR 308
S ++ R
Sbjct: 543 SERRER 548
Score = 48.9 bits (115), Expect = 6e-06
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 173 EAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYR 232
E E+ + + +D D + E+++++ ER +H + ++ +K + R +
Sbjct: 402 EKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREK 461
Query: 233 -RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHR 291
RS+ +R+ R P RS+S R R R RR RS S+SP ++ + +
Sbjct: 462 DRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRR---RRSRSSSRSPRTSKTIKRK 518
Query: 292 SHSKSPERSKKSHKKSRRGNE 312
S S+SP ++ K +R E
Sbjct: 519 S-SRSPSPRSRNKKDKKREKE 538
Score = 45.4 bits (106), Expect = 6e-05
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 193 SSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR-RSRSPKRRSP 251
SS+ + S H R R D+ RRS + +RS+SR R+ RSRS R
Sbjct: 319 SSKSHSRRKRSQSKHRSRSHNRSRSRQKDR-RRSKSPHKKRSKSRERRKSRSRSHSRDKR 377
Query: 252 SPRRERHRSKSPRRHRSRSRDR---RHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
RE+ + K + + R ++R + R + K G ++ R + K E+ K+ ++
Sbjct: 378 KDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKD-RDKEREKDREKDKEKDRERE 436
Query: 309 RGNE 312
R E
Sbjct: 437 REKE 440
Score = 42.4 bits (98), Expect = 5e-04
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 4/124 (3%)
Query: 193 SSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPS 252
S + R SP +R R+ K R R +R +R + K +
Sbjct: 337 SHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDRE 396
Query: 253 PRRERHRSKSPRRHRSRSRDR---RHRSRSKSPGHHRS-HRHRSHSKSPERSKKSHKKSR 308
RER + + + R +++DR R + R K R R + H K ++ K+ +
Sbjct: 397 KEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKE 456
Query: 309 RGNE 312
+ E
Sbjct: 457 KERE 460
Score = 37.4 bits (85), Expect = 0.017
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 24/134 (17%)
Query: 175 EQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRS 234
E+++ + E+D + E+E E++++ + D R R+ DK
Sbjct: 382 EKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDK-----------E 430
Query: 235 RSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHS 294
+ R R K R +E+ + K + RS+ D + + KS
Sbjct: 431 KDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKS------------- 477
Query: 295 KSPERSKKSHKKSR 308
++P RS + ++SR
Sbjct: 478 RTPPRSYNASRRSR 491
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 62.0 bits (149), Expect = 7e-10
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRY 231
+E ++ R E+D D + E+++E++ + +R D +R+ DK R+P Y
Sbjct: 313 KEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKK----DKKSRTPPRSY 368
Query: 232 ---RRSRSRSPRRRSRSPKRRSPSPRRERH-RSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
RRSRS S RR R + S SPR + + KS R RSR+++ + R K H
Sbjct: 369 NASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERDHISE 428
Query: 288 HRHRSHSKSPERS 300
R R S S +S
Sbjct: 429 RRERERSTSMRKS 441
Score = 58.5 bits (140), Expect = 7e-09
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 163 PRLQKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDK 222
P + + +E E++ RV + + E + + K R S H R R K
Sbjct: 148 PEMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGR--SRSHTRSKSRSSSK 205
Query: 223 P--RRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSR--SRDRRHRSR 278
RR + RSRS + R + +RRS SP ++R +S+ R+ RSR SRD+R +R
Sbjct: 206 SHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTR 265
Query: 279 SKSPGHHRSHRHRSHSKSPERSKKSHKKSRRG 310
K R + + K ER K+ K+ RG
Sbjct: 266 EKIKEKERV-KEKDREKEREREKEREKEKERG 296
Score = 55.5 bits (132), Expect = 6e-08
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 225 RSPTLRYRRSRSRSPRRRSRSPKR-------RSPSPRRERHRSKSPRRHRSRSRDRRHRS 277
RS T RS S+S RR RS + RS S +++R RSKSP + RS+SR+RR +S
Sbjct: 193 RSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERR-KS 251
Query: 278 RSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312
RS+S + R K ER K+ ++ R E
Sbjct: 252 RSRSHSRDKRKDTREKIKEKERVKEKDREKERERE 286
Score = 53.9 bits (128), Expect = 2e-07
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 23/134 (17%)
Query: 185 EEDMDDVESSEEEEEEDEKLERVP------------SPDHRRRSYRDLDK-PRRSPTLRY 231
E + D + +E+ ++D+K P S + RRR R + PR S T++
Sbjct: 342 EREKDRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKR 401
Query: 232 RRSRSRSPRRRSRSPKRRSP-----SPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHR 286
+ SRS SPR R++ K+R S RRER RS S R+ S RD + + S
Sbjct: 402 KSSRSPSPRSRNKKDKKREKERDHISERRERERSTSMRK-SSNDRDGKEKLEKNS----T 456
Query: 287 SHRHRSHSKSPERS 300
S + + H+K P+ S
Sbjct: 457 SLKEKEHNKEPDSS 470
Score = 50.1 bits (118), Expect = 3e-06
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 5/126 (3%)
Query: 185 EEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSR 244
E+D + E E+E ++ ++ + + R+ D+ + R + +SR+P R
Sbjct: 310 EKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSRTPPRSYN 369
Query: 245 SPKR-RSPSPRRERHRSKSPRRH-RSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKK 302
+ +R RS S R R RS+S R R+ +R SRS SP RS + + ER
Sbjct: 370 ASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSP---RSRNKKDKKREKERDHI 426
Query: 303 SHKKSR 308
S ++ R
Sbjct: 427 SERRER 432
Score = 48.9 bits (115), Expect = 6e-06
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 173 EAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYR 232
E E+ + + +D D + E+++++ ER +H + ++ +K + R +
Sbjct: 286 EKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREK 345
Query: 233 -RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHR 291
RS+ +R+ R P RS+S R R R RR RS S+SP ++ + +
Sbjct: 346 DRSKEIDEKRKKDKKSRTPPRSYNASRRSRSSSRERRR---RRSRSSSRSPRTSKTIKRK 402
Query: 292 SHSKSPERSKKSHKKSRRGNE 312
S S+SP ++ K +R E
Sbjct: 403 S-SRSPSPRSRNKKDKKREKE 422
Score = 45.4 bits (106), Expect = 6e-05
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 193 SSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRR-RSRSPKRRSP 251
SS+ + S H R R D+ RRS + +RS+SR R+ RSRS R
Sbjct: 203 SSKSHSRRKRSQSKHRSRSHNRSRSRQKDR-RRSKSPHKKRSKSRERRKSRSRSHSRDKR 261
Query: 252 SPRRERHRSKSPRRHRSRSRDR---RHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSR 308
RE+ + K + + R ++R + R + K G ++ R + K E+ K+ ++
Sbjct: 262 KDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKD-RDKEREKDREKDKEKDRERE 320
Query: 309 RGNE 312
R E
Sbjct: 321 REKE 324
Score = 42.4 bits (98), Expect = 5e-04
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 4/124 (3%)
Query: 193 SSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPS 252
S + R SP +R R+ K R R +R +R + K +
Sbjct: 221 SHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDRE 280
Query: 253 PRRERHRSKSPRRHRSRSRDR---RHRSRSKSPGHHRS-HRHRSHSKSPERSKKSHKKSR 308
RER + + + R +++DR R + R K R R + H K ++ K+ +
Sbjct: 281 KEREREKEREKEKERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKE 340
Query: 309 RGNE 312
+ E
Sbjct: 341 KERE 344
Score = 37.4 bits (85), Expect = 0.017
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 24/134 (17%)
Query: 175 EQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRS 234
E+++ + E+D + E+E E++++ + D R R+ DK
Sbjct: 266 EKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKEREKDREKDK-----------E 314
Query: 235 RSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHS 294
+ R R K R +E+ + K + RS+ D + + KS
Sbjct: 315 KDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKS------------- 361
Query: 295 KSPERSKKSHKKSR 308
++P RS + ++SR
Sbjct: 362 RTPPRSYNASRRSR 375
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 61.6 bits (148), Expect = 9e-10
Identities = 39/92 (42%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 222 KPRRSPTLRYRRSRSRSP-RRRSRSPKRRS-PSPRRERHRSKSPRRHRSRSRDRRHRSRS 279
K R + + R RSR+P R R R R+S PS R+RHRS+ RR SRSR RSRS
Sbjct: 9 KDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRS---RSRS 65
Query: 280 KSPGHHRSHRHRSHSKSPERSKKSHKKSRRGN 311
KS R H+ R K +R+KK + + G+
Sbjct: 66 KSAERERRHKERERDKERDRNKKDRDRDKDGH 97
Score = 55.1 bits (131), Expect = 8e-08
Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 208 PSPDHRRRSY-----RDLDKPRRS-PTLRYRRSRSRSPRR---RSRSPKRRSPSPRRERH 258
PS + R+RS RD D+ R+S P+ +R RSR RR RSRS + RS S RER
Sbjct: 15 PSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRS-RSRSKSAERER- 72
Query: 259 RSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312
R K R + R R+++ R R K GH R + S SP R K + R ++
Sbjct: 73 RHKERERDKERDRNKKDRDRDKD-GHRRDKDRKRSSLSPGRGKDFKSRKDRDSK 125
Score = 48.9 bits (115), Expect = 6e-06
Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 9/132 (6%)
Query: 185 EEDMDDVESSEE-------EEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYR-RSRS 236
++D D S EE + E D +R SP R+ +R D+ R R R RS+S
Sbjct: 8 KKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKS 67
Query: 237 RSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKS 296
RR + +R R ++ R + HR R +DR+ S S G R SK
Sbjct: 68 AERERRHKERERDKERDRNKKDRDRDKDGHR-RDKDRKRSSLSPGRGKDFKSRKDRDSKK 126
Query: 297 PERSKKSHKKSR 308
E + KK +
Sbjct: 127 DEEDEHGDKKPK 138
Score = 29.6 bits (65), Expect = 3.6
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 11/131 (8%)
Query: 190 DVESSEEEEEEDEKLERVP-----------SPDHRRRSYRDLDKPRRSPTLRYRRSRSRS 238
D + EE+E D+K + P + + + L K R RR +
Sbjct: 123 DSKKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVE 182
Query: 239 PRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPE 298
R+R +R+ ++ R R+RR R ++ G+ + + +
Sbjct: 183 ERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEKD 242
Query: 299 RSKKSHKKSRR 309
+SK+ H R
Sbjct: 243 KSKELHAIKER 253
>gi|4757926 RNA binding motif protein 39 isoform b [Homo sapiens]
Length = 524
Score = 61.2 bits (147), Expect = 1e-09
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 190 DVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRR 249
D+E+ E + ++ + + H RS + RS + +RS+S+ +R +++
Sbjct: 6 DIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERKK 65
Query: 250 SPSPRRERHRSKSPRRHRSRSRDRRHRSRSKS-----------------PGHHRSHRHRS 292
S S R+R RSK RR RSRSRDRR R R +S P + R RS
Sbjct: 66 SKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRS 125
Query: 293 HSKSPERSKKS 303
SKSP R KS
Sbjct: 126 RSKSPFRKDKS 136
Score = 42.4 bits (98), Expect = 5e-04
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 219 DLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPR---RERHRSKSPRRHRSRSRDRRH 275
D++ +P + S + RS KR+ R ER RSKS R RSR R+R+
Sbjct: 6 DIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERK- 64
Query: 276 RSRSKSPGHHRS-HRHRSHSKSPERSKKSHKKS 307
+S+S+ RS R RS S+S +R + +S
Sbjct: 65 KSKSRERKRSRSKERRRSRSRSRDRRFRGRYRS 97
Score = 42.0 bits (97), Expect = 7e-04
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 258 HRSKSPRRHRSRSRDRRH-RSRSKSPGHHRSH-RHRSHSKSPERSKKSHKKSRR 309
H +S +R +S+SR R H R RSKS RS R R SKS ER + K+ RR
Sbjct: 28 HEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRR 81
Score = 33.1 bits (74), Expect = 0.33
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 254 RRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312
+++ ++ S H RS+ R+ +S+S+S H R RS SK +RS+ +K + E
Sbjct: 16 KKDENKLSSANGHEERSKKRK-KSKSRSRSHERK---RSKSKERKRSRDRERKKSKSRE 70
>gi|35493811 RNA binding motif protein 39 isoform a [Homo sapiens]
Length = 530
Score = 61.2 bits (147), Expect = 1e-09
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 17/131 (12%)
Query: 190 DVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRR 249
D+E+ E + ++ + + H RS + RS + +RS+S+ +R +++
Sbjct: 6 DIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERKK 65
Query: 250 SPSPRRERHRSKSPRRHRSRSRDRRHRSRSKS-----------------PGHHRSHRHRS 292
S S R+R RSK RR RSRSRDRR R R +S P + R RS
Sbjct: 66 SKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRS 125
Query: 293 HSKSPERSKKS 303
SKSP R KS
Sbjct: 126 RSKSPFRKDKS 136
Score = 42.4 bits (98), Expect = 5e-04
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Query: 219 DLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPR---RERHRSKSPRRHRSRSRDRRH 275
D++ +P + S + RS KR+ R ER RSKS R RSR R+R+
Sbjct: 6 DIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERK- 64
Query: 276 RSRSKSPGHHRS-HRHRSHSKSPERSKKSHKKS 307
+S+S+ RS R RS S+S +R + +S
Sbjct: 65 KSKSRERKRSRSKERRRSRSRSRDRRFRGRYRS 97
Score = 42.0 bits (97), Expect = 7e-04
Identities = 25/54 (46%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 258 HRSKSPRRHRSRSRDRRH-RSRSKSPGHHRSH-RHRSHSKSPERSKKSHKKSRR 309
H +S +R +S+SR R H R RSKS RS R R SKS ER + K+ RR
Sbjct: 28 HEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRR 81
Score = 33.1 bits (74), Expect = 0.33
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 254 RRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGNE 312
+++ ++ S H RS+ R+ +S+S+S H R RS SK +RS+ +K + E
Sbjct: 16 KKDENKLSSANGHEERSKKRK-KSKSRSRSHERK---RSKSKERKRSRDRERKKSKSRE 70
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 60.8 bits (146), Expect = 1e-09
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 3/147 (2%)
Query: 166 QKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRR 225
+KR E ++ E + E+ + E + + EK +R RR + ++ R
Sbjct: 64 KKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKER 123
Query: 226 SPTLRYRRSRSRSPRR---RSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSP 282
+ RR R R RR R + KR +RER R K + R + R+R + R K
Sbjct: 124 ERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKER 183
Query: 283 GHHRSHRHRSHSKSPERSKKSHKKSRR 309
+ K R KK KK R+
Sbjct: 184 ERKERRERKKERKKERRKKKERKKDRK 210
Score = 53.9 bits (128), Expect = 2e-07
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 4/136 (2%)
Query: 180 RVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSY---RDLDKPRRSPTLRYRRSRS 236
R S +++ + E + E E++ K ER +R+ ++ ++ R+ + + R
Sbjct: 32 RESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERRE 91
Query: 237 RSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKS 296
+ R+R + K+R R R R K R + R R+ + R K + R + +
Sbjct: 92 KERRKRKKEKKKRERKQRGRRERKKKKER-KERERENKQRRERKRKKRRKKKRRKERKRE 150
Query: 297 PERSKKSHKKSRRGNE 312
ER K+ K+ +R E
Sbjct: 151 KERGKRERKRKKRKKE 166
Score = 52.4 bits (124), Expect = 5e-07
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 193 SSEEEEEEDEKLERVPSPDHRRRS-YRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSP 251
+ E E + E+ ER R + R+ K + + R + R +R+ R +R+
Sbjct: 30 TQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKER 89
Query: 252 SPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRRGN 311
+ R R K ++ + R RR R + K R R R + + ER +K +K +R
Sbjct: 90 REKERRKRKKEKKKRERKQRGRRERKKKK----ERKERERENKQRRERKRKKRRKKKRRK 145
Query: 312 E 312
E
Sbjct: 146 E 146
Score = 52.0 bits (123), Expect = 7e-07
Identities = 38/143 (26%), Positives = 57/143 (39%), Gaps = 8/143 (5%)
Query: 173 EAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYR 232
E E+ R +E + +E E ++ ER RR R K + R +
Sbjct: 49 EREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQ 108
Query: 233 RSRSRSPRRRSRSPKRRSPSPRRERHRSKSPR------RHRSRSRDRRHRSRSKSPGHHR 286
R R +++ R + R RRER R K + R R + R +R R R K R
Sbjct: 109 RGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEER 168
Query: 287 SHRHRSHSKSPERSKKSHKKSRR 309
+ + K ER K+ +K RR
Sbjct: 169 EKKRERNRK--ERKKERERKERR 189
Score = 51.2 bits (121), Expect = 1e-06
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Query: 172 EEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRY 231
+E ++ + R E + E ++ +E EK R + ++R + + R
Sbjct: 61 KEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKER 120
Query: 232 RRSRSRSPRRRSRSPKRRSPSPR-----RERHRSKSPRRHRSRSRDRRHRSRSKSPGHHR 286
+ + +RR R K+R R RE+ R K R+ + R ++ R + R ++ +
Sbjct: 121 KERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERK 180
Query: 287 SHRHRSHSKSPERSKKSHKKSRR 309
R R K KK KK RR
Sbjct: 181 KERER---KERRERKKERKKERR 200
Score = 43.9 bits (102), Expect = 2e-04
Identities = 25/106 (23%), Positives = 42/106 (39%), Gaps = 3/106 (2%)
Query: 207 VPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPR-- 264
+ P +R S R ++ R R R + R + KR+ +ER R + R
Sbjct: 25 ISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREK 84
Query: 265 -RHRSRSRDRRHRSRSKSPGHHRSHRHRSHSKSPERSKKSHKKSRR 309
R R ++RR R + K + R K ER ++ + +R
Sbjct: 85 QRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQR 130
Score = 36.6 bits (83), Expect = 0.029
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 13/130 (10%)
Query: 166 QKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLD---- 221
++R +E ++ E + E E E E E ++ ER +++ ++
Sbjct: 93 ERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKE 152
Query: 222 --------KPRRSPTLRYRRSRSRSPRRRSRSPK-RRSPSPRRERHRSKSPRRHRSRSRD 272
K R+ +R R+R R++ R K RR R++ R K R + R D
Sbjct: 153 RGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRKTD 212
Query: 273 RRHRSRSKSP 282
R+ S+ P
Sbjct: 213 RQTDSQVFRP 222
>gi|122937227 U2-associated SR140 protein [Homo sapiens]
Length = 1029
Score = 60.8 bits (146), Expect = 1e-09
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 41/215 (19%)
Query: 121 EPLYNDYRKIKSQNRNGEFEL-MHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEP 179
E ++ Y ++ + R E+ + V +F DEL +R P+ + E+ E
Sbjct: 827 ESKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKR------PKKPGQSFQEQVEHYRD 880
Query: 180 RVSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSR---S 236
++ E++ + E ++++ EKLE RS +K +PT + R+ R S
Sbjct: 881 KLLQREKEKELERERERDKKDKEKLES--------RSKDKKEKDECTPTRKERKRRHSTS 932
Query: 237 RSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDR---------------RHRSRSKS 281
SP R S + +SPSP+ ER +S R H+ SR R R S S++
Sbjct: 933 PSPSRSSSGRRVKSPSPKSERSE-RSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRT 991
Query: 282 PGHHRSHRHRSHSKSPERSK-------KSHKKSRR 309
P R R RS KS ++S+ +SHKKS++
Sbjct: 992 PKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKK 1026
Score = 47.4 bits (111), Expect = 2e-05
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 89 EFIKNEDFKYVRMLGALYMRLTGTAIDCYKYLEPLYNDYRKIKSQNRNGEFELMHVDEFI 148
E +++ KY M +L + K+ + L + R K G+ V+ +
Sbjct: 824 EMTESKFSKYSEMSEEKRAKLREIELKVMKFQDELESGKRPKKP----GQSFQEQVEHYR 879
Query: 149 DELLHSERVCDIILPRLQKRYVLEEAEQLEPRVSALEEDMDDVESSEEEEEEDEKLERVP 208
D+LL E+ ++ R + + ++ E+LE R S +++ D+ + +E + P
Sbjct: 880 DKLLQREKEKELERERERDK---KDKEKLESR-SKDKKEKDECTPTRKERKRRHSTSPSP 935
Query: 209 SPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSR---SPK------RRSPS----PRR 255
S R + P+ + R RS S R RS SP+ +RSPS P+R
Sbjct: 936 SRSSSGRRVKS-PSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKR 994
Query: 256 ERH-RSKSPRRHRSRSRDRRHRSRSKSPGHHRSHRHRSHSK 295
R RS+SP++ +S RS+S+SP HRSH+ +K
Sbjct: 995 SRRSRSRSPKKSGKKS-----RSQSRSP--HRSHKKSKKNK 1028
Score = 37.4 bits (85), Expect = 0.017
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 18/86 (20%)
Query: 191 VESSEEEEEEDEKLERVPSPDHRRRSY-----RDLDKP-RRSPT-----LRYRRSRSRSP 239
V+S + E E+ ER R RS RD+ K +RSP+ R RRSRSRSP
Sbjct: 944 VKSPSPKSERSERSERSHKESSRSRSSHKDSPRDVSKKAKRSPSGSRTPKRSRRSRSRSP 1003
Query: 240 RR-------RSRSPKRRSPSPRRERH 258
++ +SRSP R ++ +H
Sbjct: 1004 KKSGKKSRSQSRSPHRSHKKSKKNKH 1029
Score = 32.3 bits (72), Expect = 0.55
Identities = 41/181 (22%), Positives = 67/181 (37%), Gaps = 56/181 (30%)
Query: 185 EEDMDDVESSEEEEEEDEK-LERVPSPDHRRRS--------------YRDLDKPRRSP-- 227
EE ++ ++EEE EDE+ + S +H S Y ++ + +R+
Sbjct: 786 EESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPIKEEMTESKFSKYSEMSEEKRAKLR 845
Query: 228 TLRYRRSRSRSPRRRSRSPKRRSPSPRRE--------RHRSKSPRRHRSRSRDRRHR--- 276
+ + + + + PK+ S + + R K R R RD++ +
Sbjct: 846 EIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKL 905
Query: 277 -SRSKSPGHH------RSHRHRSHSKSP---------------------ERSKKSHKKSR 308
SRSK R R R HS SP ERS++SHK+S
Sbjct: 906 ESRSKDKKEKDECTPTRKERKRRHSTSPSPSRSSSGRRVKSPSPKSERSERSERSHKESS 965
Query: 309 R 309
R
Sbjct: 966 R 966
Score = 30.8 bits (68), Expect = 1.6
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 13/120 (10%)
Query: 191 VESSEEEEEEDEKLERVPSPDHR---RRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPK 247
V +++EE E DEK ++ P R +++ + R P+L ++ + P ++ K
Sbjct: 141 VNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIETK-KPPLKKGEKEK 199
Query: 248 RRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSK----SPGHHRSHRHRSHSKSPERSKKS 303
++S K + RD RH+++ + P S R +P R +S
Sbjct: 200 KKS-----NLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRS 254
>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
Length = 951
Score = 60.5 bits (145), Expect = 2e-09
Identities = 56/168 (33%), Positives = 80/168 (47%), Gaps = 37/168 (22%)
Query: 180 RVSALEEDMDDVESSEEEEEEDEKLERV--------PSPDHRRRSYRDLDK--PRRSPTL 229
R S+ +D E E+++++ +K R S R RS+ P T+
Sbjct: 740 RPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTV 799
Query: 230 RYRRSRSRSPRRRSRSPKRR--------------SPSPRRERHRSKSP----RRHRSRSR 271
R RSRSRSPRRR+ SP+RR SP R+R RS+SP ++ RSRSR
Sbjct: 800 RRSRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSR 859
Query: 272 DR-RHRSRSKSPGHHRSHR------HRSHSK--SPERSKKSHKKSRRG 310
+ + RS+S SP + R H +HS SP S+ S ++ RG
Sbjct: 860 TKSKARSQSVSPSKQAAPRPAAPAAHSAHSASVSPVESRGSSQERSRG 907
Score = 50.8 bits (120), Expect = 2e-06
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 9/188 (4%)
Query: 131 KSQNRNGEFELMHVDEFIDELLHS---ERVCDIILPRLQKRYVLEEAEQLEPRVSALEED 187
K Q E E + +++ L + E++ +K+ E + + L+
Sbjct: 638 KPQLTQEELEAKQAKQKLEDRLAAAAREKLAQASKESKEKQLQAERKRKAALFLQTLKNP 697
Query: 188 MDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPRRRSRSPK 247
+ + E+ + EE E +P R L P R S+S+ P R K
Sbjct: 698 LPEAEAGKIEESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDR-PSSKSKDPPREEEKEK 756
Query: 248 RRSPSPRRERHRSKSPRRHRS-RSRDRRH-RSRSKSPGHHRS-HRHRSHSKSPERSKKSH 304
++ +R R RS+SP+ H S +SR R H +++ P +R+ R RS S+SP R ++H
Sbjct: 757 KKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRR--RAH 814
Query: 305 KKSRRGNE 312
RR E
Sbjct: 815 SPERRREE 822
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,348,383
Number of Sequences: 37866
Number of extensions: 707058
Number of successful extensions: 20576
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 631
Number of HSP's that attempted gapping in prelim test: 8885
Number of HSP's gapped (non-prelim): 5877
length of query: 312
length of database: 18,247,518
effective HSP length: 102
effective length of query: 210
effective length of database: 14,385,186
effective search space: 3020889060
effective search space used: 3020889060
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.